RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 PDK1Q15118 436 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 TAF5Q15542 800 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 FSCN1Q16658 493 aaKnown RBP9.28□□□□□ -0.92
TMEM116-209ENST00000550020 ARL13BQ3SXY8 428 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 PPP6R3Q5H9R7 873 aaPredicted RBP9.28□□□□□ -0.92
TMEM116-209ENST00000550020 GLRA4Q5JXX5 417 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 TTC39BQ5VTQ0 682 aaPredicted RBP9.28□□□□□ -0.92
TMEM116-209ENST00000550020 ANKRD22Q5VYY1 191 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 TWF2Q6IBS0 349 aaKnown RBP9.28□□□□□ -0.92
TMEM116-209ENST00000550020 CAPN12Q6ZSI9 719 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 CYS1Q717R9 158 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 PACS2Q86VP3 889 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 PQLC3Q8N755 202 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 CCDC63Q8NA47 563 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 B3GALNT2Q8NCR0 500 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 PCDH19Q8TAB3 1148 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 SLC2A14Q8TDB8 520 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 TFB1MQ8WVM0 346 aaKnown RBP9.28□□□□□ -0.92
TMEM116-209ENST00000550020 KBTBD7Q8WVZ9 684 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 RAB3IPQ96QF0 476 aaPredicted RBP9.28□□□□□ -0.92
TMEM116-209ENST00000550020 MTG1Q9BT17 334 aaPredicted RBP9.28□□□□□ -0.92
TMEM116-209ENST00000550020 MED10Q9BTT4 135 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 C11orf84Q9BUA3 381 aaPredicted RBP9.28□□□□□ -0.92
TMEM116-209ENST00000550020 TUBB6Q9BUF5 446 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 USP29Q9HBJ7 922 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 ZFYVE28Q9HCC9 887 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 EIF2B3Q9NR50 452 aaKnown RBP9.28□□□□□ -0.92
TMEM116-209ENST00000550020 KLC4Q9NSK0 619 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 ETNK2Q9NVF9 386 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 ZC3H7BQ9UGR2 993 aaKnown RBP9.28□□□□□ -0.92
TMEM116-209ENST00000550020 CPA4Q9UI42 421 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 CHMP2BQ9UQN3 213 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 TRPV2Q9Y5S1 764 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 PTCH2Q9Y6C5 1203 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 TEX264Q9Y6I9 313 aa9.28□□□□□ -0.92
TMEM116-209ENST00000550020 PIK3R2O00459 728 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 CYB561D2O14569 222 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 TNPO2O14787 897 aaKnown RBP9.27□□□□□ -0.93
TMEM116-209ENST00000550020 GPR182O15218 404 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 LPXNO60711 386 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 OPHN1O60890 802 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 DUSP11O75319 330 aaKnown RBP9.27□□□□□ -0.93
TMEM116-209ENST00000550020 SPAG7O75391 227 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 TMEM63AO94886 807 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 APRTP07741 180 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 SNRPAP09012 282 aaKnown RBP9.27□□□□□ -0.93
TMEM116-209ENST00000550020 PDGFRBP09619 1106 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 FAM200BP0CF97 657 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 NEFHP12036 1026 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 SKIP12755 728 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 CCDC130P13994 396 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 NPR3P17342 541 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 PTPN1P18031 435 aaKnown RBP9.27□□□□□ -0.93
TMEM116-209ENST00000550020 IL4RP24394 825 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 AKAP5P24588 427 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 RBL1P28749 1068 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 PCSK1P29120 753 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 HOXC8P31273 242 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 HNRNPH1P31943 449 aaKnown RBP9.27□□□□□ -0.93
TMEM116-209ENST00000550020 SLC8A1P32418 973 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 LILRA4P59901 499 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 MRPS5P82675 430 aaKnown RBP9.27□□□□□ -0.93
TMEM116-209ENST00000550020 MRPS6P82932 125 aaKnown RBP9.27□□□□□ -0.93
TMEM116-209ENST00000550020 DNAJC3Q13217 504 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 PTK7Q13308 1070 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 MPP2Q14168 576 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 SNCBQ16143 134 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 DBN1Q16643 649 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 HP1BP3Q5SSJ5 553 aaPredicted RBP9.27□□□□□ -0.93
TMEM116-209ENST00000550020 UBXN11Q5T124 520 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 SH3PXD2AQ5TCZ1 1133 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 MFSD14CQ5VZR4 134 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 TRNP1Q6NT89 227 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 ZNF449Q6P9G9 518 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 NPNTQ6UXI9 565 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 LRRC6Q86X45 466 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 METTL23Q86XA0 190 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 MAGEC3Q8TD91 643 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 DCAKDQ8WVC6 231 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 SLC44A1Q8WWI5 657 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 CDKL2Q92772 493 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 KHSRPQ92945 711 aaKnown RBP eCLIP9.27□□□□□ -0.938e-7■■□□□ 12.4
TMEM116-209ENST00000550020 FAM149B1Q96BN6 582 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 APOPT1Q96IL0 206 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 CSPG4P5Q96PW8 444 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 PTPN18Q99952 460 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 SLC40A1Q9NP59 571 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 PRKAG3Q9UGI9 489 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 DSEQ9UL01 958 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 FZD10Q9ULW2 581 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 PHTF1Q9UMS5 762 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 GIT1Q9Y2X7 761 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 HES2Q9Y543 173 aa9.27□□□□□ -0.93
TMEM116-209ENST00000550020 A0A0A0MRY4 1105 aa9.26□□□□□ -0.93
TMEM116-209ENST00000550020 TCRBV9S1A1TA0A576 114 aa9.26□□□□□ -0.93
TMEM116-209ENST00000550020 KBTBD13C9JR72 458 aa9.26□□□□□ -0.93
TMEM116-209ENST00000550020 DNM1LO00429 736 aa9.26□□□□□ -0.93
TMEM116-209ENST00000550020 GABRDO14764 452 aa9.26□□□□□ -0.93
TMEM116-209ENST00000550020 CAPN9O14815 690 aa9.26□□□□□ -0.93
TMEM116-209ENST00000550020 PPEF2O14830 753 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms