RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 MDM4O15151 490 aa19.58■□□□□ 0.72
CHMP1A-207ENST00000549328 STC2O76061 302 aa19.58■□□□□ 0.72
CHMP1A-207ENST00000549328 FGFR1OPO95684 399 aaKnown RBP19.58■□□□□ 0.72
CHMP1A-207ENST00000549328 ZBED1O96006 694 aa19.58■□□□□ 0.72
CHMP1A-207ENST00000549328 TKTL1P51854 596 aa19.58■□□□□ 0.72
CHMP1A-207ENST00000549328 STX17P56962 302 aa19.58■□□□□ 0.72
CHMP1A-207ENST00000549328 KCNH2Q12809 1159 aa19.58■□□□□ 0.72
CHMP1A-207ENST00000549328 CSRP2Q16527 193 aa19.58■□□□□ 0.72
CHMP1A-207ENST00000549328 RASSF3Q86WH2 238 aa19.58■□□□□ 0.72
CHMP1A-207ENST00000549328 PPM1KQ8N3J5 372 aa19.58■□□□□ 0.72
CHMP1A-207ENST00000549328 CCDC33Q8N5R6 958 aa19.58■□□□□ 0.72
CHMP1A-207ENST00000549328 NAT16Q8N8M0 369 aa19.58■□□□□ 0.72
CHMP1A-207ENST00000549328 EHBP1Q8NDI1 1231 aa19.58■□□□□ 0.72
CHMP1A-207ENST00000549328 XPO6Q96QU8 1125 aaKnown RBP19.58■□□□□ 0.72
CHMP1A-207ENST00000549328 SRRTQ9BXP5 876 aaKnown RBP19.58■□□□□ 0.72
CHMP1A-207ENST00000549328 DCLK3Q9C098 648 aa19.58■□□□□ 0.72
CHMP1A-207ENST00000549328 SEMA4GQ9NTN9 838 aa19.58■□□□□ 0.72
CHMP1A-207ENST00000549328 ANTXRLA6NF34 631 aa19.57■□□□□ 0.72
CHMP1A-207ENST00000549328 CACNG3O60359 315 aa19.57■□□□□ 0.72
CHMP1A-207ENST00000549328 SETSIPP0DME0 302 aa19.57■□□□□ 0.72
CHMP1A-207ENST00000549328 YWHAGP61981 247 aaKnown RBP eCLIP19.57■□□□□ 0.72
CHMP1A-207ENST00000549328 GCNT1Q02742 428 aa19.57■□□□□ 0.72
CHMP1A-207ENST00000549328 KDSRQ06136 332 aa19.57■□□□□ 0.72
CHMP1A-207ENST00000549328 RSPO4Q2I0M5 234 aaPredicted RBP19.57■□□□□ 0.72
CHMP1A-207ENST00000549328 PKDCCQ504Y2 493 aa19.57■□□□□ 0.72
CHMP1A-207ENST00000549328 EOGTQ5NDL2 527 aa19.57■□□□□ 0.72
CHMP1A-207ENST00000549328 EMC10Q5UCC4 262 aa19.57■□□□□ 0.72
CHMP1A-207ENST00000549328 TMEM270Q6UE05 265 aa19.57■□□□□ 0.72
CHMP1A-207ENST00000549328 LCLAT1Q6UWP7 414 aa19.57■□□□□ 0.72
CHMP1A-207ENST00000549328 KBTBD6Q86V97 674 aa19.57■□□□□ 0.72
CHMP1A-207ENST00000549328 MIB1Q86YT6 1006 aa19.57■□□□□ 0.72
CHMP1A-207ENST00000549328 SFTPA1Q8IWL2 248 aa19.57■□□□□ 0.72
CHMP1A-207ENST00000549328 ALLCQ8N6M5 410 aa19.57■□□□□ 0.72
CHMP1A-207ENST00000549328 TERB1Q8NA31 727 aa19.57■□□□□ 0.72
CHMP1A-207ENST00000549328 KCTD13Q8WZ19 329 aa19.57■□□□□ 0.72
CHMP1A-207ENST00000549328 CNOT6LQ96LI5 555 aaKnown RBP19.57■□□□□ 0.72
CHMP1A-207ENST00000549328 BBS2Q9BXC9 721 aa19.57■□□□□ 0.72
CHMP1A-207ENST00000549328 LRRC4Q9HBW1 653 aa19.57■□□□□ 0.72
CHMP1A-207ENST00000549328 STRIP2Q9ULQ0 834 aa19.57■□□□□ 0.72
CHMP1A-207ENST00000549328 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.57■□□□□ 0.72
CHMP1A-207ENST00000549328 SDK1Q7Z5N4 2213 aa19.57■□□□□ 0.72
CHMP1A-207ENST00000549328 EML5Q05BV3 1969 aa19.56■□□□□ 0.72
CHMP1A-207ENST00000549328 TULP2O00295 520 aa19.56■□□□□ 0.72
CHMP1A-207ENST00000549328 ALDH1A2O94788 518 aa19.56■□□□□ 0.72
CHMP1A-207ENST00000549328 KLF8O95600 359 aaPredicted RBP19.56■□□□□ 0.72
CHMP1A-207ENST00000549328 AFPP02771 609 aaKnown RBP19.56■□□□□ 0.72
CHMP1A-207ENST00000549328 TYRP14679 529 aa19.56■□□□□ 0.72
CHMP1A-207ENST00000549328 TIE1P35590 1138 aa19.56■□□□□ 0.72
CHMP1A-207ENST00000549328 EFEMP1Q12805 493 aa19.56■□□□□ 0.72
CHMP1A-207ENST00000549328 STILQ15468 1287 aa19.56■□□□□ 0.72
CHMP1A-207ENST00000549328 CNGA2Q16280 664 aa19.56■□□□□ 0.72
CHMP1A-207ENST00000549328 PLK5Q496M5 336 aa19.56■□□□□ 0.72
CHMP1A-207ENST00000549328 USP39Q53GS9 565 aaKnown RBP19.56■□□□□ 0.72
CHMP1A-207ENST00000549328 RSRC2Q7L4I2 434 aaKnown RBP19.56■□□□□ 0.72
CHMP1A-207ENST00000549328 TRMT11Q7Z4G4 463 aaKnown RBP19.56■□□□□ 0.72
CHMP1A-207ENST00000549328 SCML4Q8N228 414 aa19.56■□□□□ 0.72
CHMP1A-207ENST00000549328 TXNDC5Q8NBS9 432 aaKnown RBP19.56■□□□□ 0.72
CHMP1A-207ENST00000549328 ULBP1Q9BZM6 244 aa19.56■□□□□ 0.72
CHMP1A-207ENST00000549328 MARCH2Q9P0N8 246 aa19.56■□□□□ 0.72
CHMP1A-207ENST00000549328 RWDD2AQ9UIY3 292 aa19.56■□□□□ 0.72
CHMP1A-207ENST00000549328 STARD13Q9Y3M8 1113 aa19.56■□□□□ 0.72
CHMP1A-207ENST00000549328 PCDHB4Q9Y5E5 795 aa19.56■□□□□ 0.72
CHMP1A-207ENST00000549328 PCDHGA5Q9Y5G8 931 aa19.56■□□□□ 0.72
CHMP1A-207ENST00000549328 CACNA1AO00555 2505 aa19.56■□□□□ 0.72
CHMP1A-207ENST00000549328 NEDD8-MDP1E9PL57 170 aa19.55■□□□□ 0.72
CHMP1A-207ENST00000549328 SGK1O00141 431 aa19.55■□□□□ 0.72
CHMP1A-207ENST00000549328 EPN2O95208 641 aa19.55■□□□□ 0.72
CHMP1A-207ENST00000549328 KLKB1P03952 638 aa19.55■□□□□ 0.72
CHMP1A-207ENST00000549328 CHKAP35790 457 aa19.55■□□□□ 0.72
CHMP1A-207ENST00000549328 CAMK4Q16566 473 aa19.55■□□□□ 0.72
CHMP1A-207ENST00000549328 RALGAPA1Q6GYQ0 2036 aa19.55■□□□□ 0.72
CHMP1A-207ENST00000549328 GRAMD4Q6IC98 578 aa19.55■□□□□ 0.72
CHMP1A-207ENST00000549328 TMEM92Q6UXU6 159 aa19.55■□□□□ 0.72
CHMP1A-207ENST00000549328 TPGS1Q6ZTW0 290 aa19.55■□□□□ 0.72
CHMP1A-207ENST00000549328 BHLHA9Q7RTU4 235 aa19.55■□□□□ 0.72
CHMP1A-207ENST00000549328 C11orf74Q86VG3 221 aa19.55■□□□□ 0.72
CHMP1A-207ENST00000549328 UBA3Q8TBC4 463 aa19.55■□□□□ 0.72
CHMP1A-207ENST00000549328 SLC35F5Q8WV83 523 aa19.55■□□□□ 0.72
CHMP1A-207ENST00000549328 TFAP2BQ92481 460 aa19.55■□□□□ 0.72
CHMP1A-207ENST00000549328 IPO9Q96P70 1041 aaKnown RBP19.55■□□□□ 0.72
CHMP1A-207ENST00000549328 POLMQ9NP87 494 aaPredicted RBP19.55■□□□□ 0.72
CHMP1A-207ENST00000549328 CNGB3Q9NQW8 809 aa19.55■□□□□ 0.72
CHMP1A-207ENST00000549328 OLA1Q9NTK5 396 aaKnown RBP19.55■□□□□ 0.72
CHMP1A-207ENST00000549328 DNAJC17Q9NVM6 304 aaKnown RBP19.55■□□□□ 0.72
CHMP1A-207ENST00000549328 RASAL2Q9UJF2 1139 aa19.55■□□□□ 0.72
CHMP1A-207ENST00000549328 MYO18AQ92614 2054 aaKnown RBP19.55■□□□□ 0.72
CHMP1A-207ENST00000549328 RNF225M0QZC1 329 aaPredicted RBP19.54■□□□□ 0.72
CHMP1A-207ENST00000549328 RHOBTB1O94844 696 aa19.54■□□□□ 0.72
CHMP1A-207ENST00000549328 ADIGQ0VDE8 80 aa19.54■□□□□ 0.72
CHMP1A-207ENST00000549328 ELF2Q15723 593 aa19.54■□□□□ 0.72
CHMP1A-207ENST00000549328 C10orf76Q5T2E6 689 aa19.54■□□□□ 0.72
CHMP1A-207ENST00000549328 ANO7Q6IWH7 933 aa19.54■□□□□ 0.72
CHMP1A-207ENST00000549328 PRR23CQ6ZRP0 262 aa19.54■□□□□ 0.72
CHMP1A-207ENST00000549328 DGLUCYQ7Z3D6 616 aa19.54■□□□□ 0.72
CHMP1A-207ENST00000549328 SIX6OS1Q8N1H7 587 aa19.54■□□□□ 0.72
CHMP1A-207ENST00000549328 ZNF513Q8N8E2 541 aaPredicted RBP19.54■□□□□ 0.72
CHMP1A-207ENST00000549328 KAT5Q92993 513 aa19.54■□□□□ 0.72
CHMP1A-207ENST00000549328 DUSP15Q9H1R2 295 aaPredicted RBP19.54■□□□□ 0.72
CHMP1A-207ENST00000549328 FBXO10Q9UK96 956 aa19.54■□□□□ 0.72
CHMP1A-207ENST00000549328 CDV3Q9UKY7 258 aaKnown RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms