RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 PCDHGB2Q9Y5G2 931 aa12.94□□□□□ -0.34
DDX54-206ENST00000549271 ATP6V1DQ9Y5K8 247 aa12.94□□□□□ -0.34
DDX54-206ENST00000549271 UBE4BO95155 1302 aa12.93□□□□□ -0.34
DDX54-206ENST00000549271 A0A1B0GTW7 788 aa12.93□□□□□ -0.34
DDX54-206ENST00000549271 A0A1W2PQ27 194 aa12.93□□□□□ -0.34
DDX54-206ENST00000549271 A0A1W2PQ64 194 aa12.93□□□□□ -0.34
DDX54-206ENST00000549271 TRIM66O15016 1216 aa12.93□□□□□ -0.34
DDX54-206ENST00000549271 CLIC2O15247 247 aa12.93□□□□□ -0.34
DDX54-206ENST00000549271 FLRT2O43155 660 aa12.93□□□□□ -0.34
DDX54-206ENST00000549271 CILPO75339 1184 aa12.93□□□□□ -0.34
DDX54-206ENST00000549271 STAU1O95793 577 aaKnown RBP12.93□□□□□ -0.34
DDX54-206ENST00000549271 OLFM2O95897 454 aa12.93□□□□□ -0.34
DDX54-206ENST00000549271 ADH1CP00326 375 aa12.93□□□□□ -0.34
DDX54-206ENST00000549271 ADH5P11766 374 aa12.93□□□□□ -0.34
DDX54-206ENST00000549271 NTSR1P30989 418 aa12.93□□□□□ -0.34
DDX54-206ENST00000549271 SYKP43405 635 aa12.93□□□□□ -0.34
DDX54-206ENST00000549271 NOP14P78316 857 aaKnown RBP12.93□□□□□ -0.34
DDX54-206ENST00000549271 BNC1Q01954 994 aa12.93□□□□□ -0.34
DDX54-206ENST00000549271 CFHR1Q03591 330 aa12.93□□□□□ -0.34
DDX54-206ENST00000549271 STK4Q13043 487 aa12.93□□□□□ -0.34
DDX54-206ENST00000549271 KMT5BQ4FZB7 885 aa12.93□□□□□ -0.34
DDX54-206ENST00000549271 DENND5BQ6ZUT9 1274 aa12.93□□□□□ -0.34
DDX54-206ENST00000549271 TRAPPC11Q7Z392 1133 aa12.93□□□□□ -0.34
DDX54-206ENST00000549271 MIB1Q86YT6 1006 aa12.93□□□□□ -0.34
DDX54-206ENST00000549271 NELFCDQ8IXH7 590 aa12.93□□□□□ -0.34
DDX54-206ENST00000549271 NOC3LQ8WTT2 800 aaKnown RBP12.93□□□□□ -0.34
DDX54-206ENST00000549271 C8orf48Q96LL4 319 aa12.93□□□□□ -0.34
DDX54-206ENST00000549271 FCRL3Q96P31 734 aaPredicted RBP12.93□□□□□ -0.34
DDX54-206ENST00000549271 RNF38Q9H0F5 515 aa12.93□□□□□ -0.34
DDX54-206ENST00000549271 GOLPH3LQ9H4A5 285 aa12.93□□□□□ -0.34
DDX54-206ENST00000549271 PRDM16Q9HAZ2 1276 aa12.93□□□□□ -0.34
DDX54-206ENST00000549271 AGPAT3Q9NRZ7 376 aa12.93□□□□□ -0.34
DDX54-206ENST00000549271 TRPM5Q9NZQ8 1165 aa12.93□□□□□ -0.34
DDX54-206ENST00000549271 FNDC3AQ9Y2H6 1198 aaKnown RBP12.93□□□□□ -0.34
DDX54-206ENST00000549271 STARD13Q9Y3M8 1113 aa12.93□□□□□ -0.34
DDX54-206ENST00000549271 PTPN13Q12923 2485 aa12.93□□□□□ -0.34
DDX54-206ENST00000549271 TEX51A0A1B0GUA7 166 aa12.92□□□□□ -0.34
DDX54-206ENST00000549271 TBC1D3BA6NDS4 549 aa12.92□□□□□ -0.34
DDX54-206ENST00000549271 ZNF840PA6NDX5 716 aa12.92□□□□□ -0.34
DDX54-206ENST00000549271 CAPN8A6NHC0 703 aa12.92□□□□□ -0.34
DDX54-206ENST00000549271 SCAMP3O14828 347 aaKnown RBP12.92□□□□□ -0.34
DDX54-206ENST00000549271 TLX3O43711 291 aaPredicted RBP12.92□□□□□ -0.34
DDX54-206ENST00000549271 NDUFS2O75306 463 aa12.92□□□□□ -0.34
DDX54-206ENST00000549271 CER1O95813 267 aa12.92□□□□□ -0.34
DDX54-206ENST00000549271 CST3P01034 146 aaPredicted RBP12.92□□□□□ -0.34
DDX54-206ENST00000549271 HLA-EP13747 358 aa12.92□□□□□ -0.34
DDX54-206ENST00000549271 BDNFP23560 247 aa12.92□□□□□ -0.34
DDX54-206ENST00000549271 GRIK1P39086 918 aa12.92□□□□□ -0.34
DDX54-206ENST00000549271 MATKP42679 507 aa12.92□□□□□ -0.34
DDX54-206ENST00000549271 PSMC1P62191 440 aaKnown RBP12.92□□□□□ -0.34
DDX54-206ENST00000549271 PSMD6Q15008 389 aa12.92□□□□□ -0.34
DDX54-206ENST00000549271 SNRNP35Q16560 246 aaKnown RBP12.92□□□□□ -0.34
DDX54-206ENST00000549271 PTPRNQ16849 979 aa12.92□□□□□ -0.34
DDX54-206ENST00000549271 KNOP1Q1ED39 458 aaKnown RBP12.92□□□□□ -0.34
DDX54-206ENST00000549271 KIAA0895Q8NCT3 520 aa12.92□□□□□ -0.34
DDX54-206ENST00000549271 RHBDD1Q8TEB9 315 aa12.92□□□□□ -0.34
DDX54-206ENST00000549271 IPO4Q8TEX9 1081 aaKnown RBP12.92□□□□□ -0.34
DDX54-206ENST00000549271 PCED1BQ96HM7 432 aa12.92□□□□□ -0.34
DDX54-206ENST00000549271 BTBD3Q9Y2F9 522 aa12.92□□□□□ -0.34
DDX54-206ENST00000549271 CPQQ9Y646 472 aa12.92□□□□□ -0.34
DDX54-206ENST00000549271 COL12A1Q99715 3063 aa12.92□□□□□ -0.34
DDX54-206ENST00000549271 PIEZO2Q9H5I5 2752 aa12.92□□□□□ -0.34
DDX54-206ENST00000549271 GOLGA8CPA6NN73 597 aa12.91□□□□□ -0.34
DDX54-206ENST00000549271 TULP1O00294 542 aaPredicted RBP12.91□□□□□ -0.34
DDX54-206ENST00000549271 ARHGAP6O43182 974 aa12.91□□□□□ -0.34
DDX54-206ENST00000549271 TULP3O75386 442 aa12.91□□□□□ -0.34
DDX54-206ENST00000549271 MYL1P05976 194 aa12.91□□□□□ -0.34
DDX54-206ENST00000549271 PDGFRBP09619 1106 aa12.91□□□□□ -0.34
DDX54-206ENST00000549271 PRR29P0C7W0 189 aa12.91□□□□□ -0.34
DDX54-206ENST00000549271 ANXA13P27216 316 aa12.91□□□□□ -0.34
DDX54-206ENST00000549271 GNL1P36915 607 aaPredicted RBP12.91□□□□□ -0.34
DDX54-206ENST00000549271 WASP42768 502 aa12.91□□□□□ -0.34
DDX54-206ENST00000549271 CYP2J2P51589 502 aa12.91□□□□□ -0.34
DDX54-206ENST00000549271 USP46P62068 366 aa12.91□□□□□ -0.34
DDX54-206ENST00000549271 CYP27A1Q02318 531 aa12.91□□□□□ -0.34
DDX54-206ENST00000549271 HLA-BQ31612 363 aa12.91□□□□□ -0.34
DDX54-206ENST00000549271 LY6G5CQ5SRR4 150 aa12.91□□□□□ -0.34
DDX54-206ENST00000549271 IL27RAQ6UWB1 636 aa12.91□□□□□ -0.34
DDX54-206ENST00000549271 LRRC69Q6ZNQ3 347 aa12.91□□□□□ -0.34
DDX54-206ENST00000549271 C12orf56Q8IXR9 622 aa12.91□□□□□ -0.34
DDX54-206ENST00000549271 ZCCHC9Q8N567 271 aaKnown RBP12.91□□□□□ -0.34
DDX54-206ENST00000549271 TERB1Q8NA31 727 aa12.91□□□□□ -0.34
DDX54-206ENST00000549271 RDH13Q8NBN7 331 aa12.91□□□□□ -0.34
DDX54-206ENST00000549271 MMS19Q96T76 1030 aa12.91□□□□□ -0.34
DDX54-206ENST00000549271 CGRRF1Q99675 332 aa12.91□□□□□ -0.34
DDX54-206ENST00000549271 GZF1Q9H116 711 aaPredicted RBP12.91□□□□□ -0.34
DDX54-206ENST00000549271 CLMPQ9H6B4 373 aa12.91□□□□□ -0.34
DDX54-206ENST00000549271 CFAP97Q9P2B7 532 aa12.91□□□□□ -0.34
DDX54-206ENST00000549271 CGNQ9P2M7 1197 aaKnown RBP12.91□□□□□ -0.34
DDX54-206ENST00000549271 NME7Q9Y5B8 376 aa12.91□□□□□ -0.34
DDX54-206ENST00000549271 MYLKQ15746 1914 aa12.91□□□□□ -0.34
DDX54-206ENST00000549271 F8VP50 259 aa12.9□□□□□ -0.34
DDX54-206ENST00000549271 PLK4O00444 970 aa12.9□□□□□ -0.34
DDX54-206ENST00000549271 ZBTB24O43167 697 aaPredicted RBP12.9□□□□□ -0.34
DDX54-206ENST00000549271 HOXC11O43248 304 aaPredicted RBP12.9□□□□□ -0.34
DDX54-206ENST00000549271 TNFSF14O43557 240 aa12.9□□□□□ -0.34
DDX54-206ENST00000549271 ZNF202O95125 648 aa12.9□□□□□ -0.34
DDX54-206ENST00000549271 OAS1P00973 400 aaKnown RBP12.9□□□□□ -0.34
DDX54-206ENST00000549271 PTPN1P18031 435 aaKnown RBP12.9□□□□□ -0.34
DDX54-206ENST00000549271 TNNI1P19237 187 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms