RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.23□□□□□ -0.13
HDAC7-228ENST00000548938 PEBP4Q96S96 227 aa14.23□□□□□ -0.13
HDAC7-228ENST00000548938 CPXM1Q96SM3 734 aa14.23□□□□□ -0.13
HDAC7-228ENST00000548938 SHCBP1LQ9BZQ2 653 aa14.23□□□□□ -0.13
HDAC7-228ENST00000548938 XAB2Q9HCS7 855 aaKnown RBP14.23□□□□□ -0.13
HDAC7-228ENST00000548938 COMMD3-BMI1R4GMX3 469 aa14.23□□□□□ -0.13
HDAC7-228ENST00000548938 HMX2A2RU54 273 aa14.22□□□□□ -0.13
HDAC7-228ENST00000548938 TOM1L1O75674 476 aa14.22□□□□□ -0.13
HDAC7-228ENST00000548938 RGS20O76081 388 aa14.22□□□□□ -0.13
HDAC7-228ENST00000548938 PRKCHP24723 683 aa14.22□□□□□ -0.13
HDAC7-228ENST00000548938 RANBP1P43487 201 aa14.22□□□□□ -0.13
HDAC7-228ENST00000548938 ACTR2P61160 394 aa14.22□□□□□ -0.13
HDAC7-228ENST00000548938 CDK18Q07002 472 aa14.22□□□□□ -0.13
HDAC7-228ENST00000548938 TUBB3Q13509 450 aa14.22□□□□□ -0.13
HDAC7-228ENST00000548938 BAATQ14032 418 aaPredicted RBP14.22□□□□□ -0.13
HDAC7-228ENST00000548938 TRMT10BQ6PF06 316 aaKnown RBP14.22□□□□□ -0.13
HDAC7-228ENST00000548938 C1orf228Q6PIY5 440 aa14.22□□□□□ -0.13
HDAC7-228ENST00000548938 DENND5BQ6ZUT9 1274 aa14.22□□□□□ -0.13
HDAC7-228ENST00000548938 CAND1Q86VP6 1230 aaKnown RBP14.22□□□□□ -0.13
HDAC7-228ENST00000548938 HIPK4Q8NE63 616 aa14.22□□□□□ -0.13
HDAC7-228ENST00000548938 FNIP1Q8TF40 1166 aa14.22□□□□□ -0.13
HDAC7-228ENST00000548938 LRRN4Q8WUT4 740 aa14.22□□□□□ -0.13
HDAC7-228ENST00000548938 NAT14Q8WUY8 206 aa14.22□□□□□ -0.13
HDAC7-228ENST00000548938 OPTNQ96CV9 577 aa14.22□□□□□ -0.13
HDAC7-228ENST00000548938 JPH1Q9HDC5 661 aaPredicted RBP14.22□□□□□ -0.13
HDAC7-228ENST00000548938 MKS1Q9NXB0 559 aa14.22□□□□□ -0.13
HDAC7-228ENST00000548938 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.22□□□□□ -0.13
HDAC7-228ENST00000548938 DKC1O60832 514 aaKnown RBP eCLIP14.22□□□□□ -0.136e-12■■■■□ 20.7
HDAC7-228ENST00000548938 ATG7O95352 703 aa14.22□□□□□ -0.13
HDAC7-228ENST00000548938 MAP3K6O95382 1288 aa14.22□□□□□ -0.13
HDAC7-228ENST00000548938 NR3C2P08235 984 aa14.22□□□□□ -0.13
HDAC7-228ENST00000548938 PABPC4LP0CB38 370 aaKnown RBP14.22□□□□□ -0.13
HDAC7-228ENST00000548938 UQCRBP14927 111 aa14.22□□□□□ -0.13
HDAC7-228ENST00000548938 OSBPP22059 807 aa14.22□□□□□ -0.13
HDAC7-228ENST00000548938 ORC1Q13415 861 aa14.22□□□□□ -0.13
HDAC7-228ENST00000548938 LRRC23Q53EV4 343 aaPredicted RBP14.22□□□□□ -0.13
HDAC7-228ENST00000548938 RAB6CQ53S08 254 aa14.22□□□□□ -0.13
HDAC7-228ENST00000548938 RABGAP1LQ5R372 815 aa14.22□□□□□ -0.13
HDAC7-228ENST00000548938 SATL1Q86VE3 508 aa14.22□□□□□ -0.13
HDAC7-228ENST00000548938 VSIG10LQ86VR7 867 aa14.22□□□□□ -0.13
HDAC7-228ENST00000548938 STKLD1Q8NE28 680 aa14.22□□□□□ -0.13
HDAC7-228ENST00000548938 FAM81AQ8TBF8 368 aa14.22□□□□□ -0.13
HDAC7-228ENST00000548938 GDPD5Q8WTR4 605 aa14.22□□□□□ -0.13
HDAC7-228ENST00000548938 DTNBP1Q96EV8 351 aa14.22□□□□□ -0.13
HDAC7-228ENST00000548938 RAB6CQ9H0N0 254 aa14.22□□□□□ -0.13
HDAC7-228ENST00000548938 CYP4F11Q9HBI6 524 aa14.22□□□□□ -0.13
HDAC7-228ENST00000548938 USP18Q9UMW8 372 aa14.22□□□□□ -0.13
HDAC7-228ENST00000548938 WDR46O15213 610 aaKnown RBP14.21□□□□□ -0.13
HDAC7-228ENST00000548938 ITM2AO43736 263 aa14.21□□□□□ -0.13
HDAC7-228ENST00000548938 OR6B1O95007 311 aa14.21□□□□□ -0.13
HDAC7-228ENST00000548938 ERBB2P04626 1255 aa14.21□□□□□ -0.13
HDAC7-228ENST00000548938 CCND2P30279 289 aa14.21□□□□□ -0.13
HDAC7-228ENST00000548938 POLR2BP30876 1174 aaKnown RBP14.21□□□□□ -0.13
HDAC7-228ENST00000548938 ABCD1P33897 745 aa14.21□□□□□ -0.13
HDAC7-228ENST00000548938 LGSNQ5TDP6 509 aa14.21□□□□□ -0.13
HDAC7-228ENST00000548938 ZBTB33Q86T24 672 aa14.21□□□□□ -0.13
HDAC7-228ENST00000548938 XYLT1Q86Y38 959 aa14.21□□□□□ -0.13
HDAC7-228ENST00000548938 BRSK2Q8IWQ3 736 aa14.21□□□□□ -0.13
HDAC7-228ENST00000548938 ZNF526Q8TF50 670 aaPredicted RBP14.21□□□□□ -0.13
HDAC7-228ENST00000548938 GPRASP2Q96D09 838 aa14.21□□□□□ -0.13
HDAC7-228ENST00000548938 KLHL4Q9C0H6 718 aa14.21□□□□□ -0.13
HDAC7-228ENST00000548938 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.21□□□□□ -0.13
HDAC7-228ENST00000548938 DNAJC16Q9Y2G8 782 aa14.21□□□□□ -0.13
HDAC7-228ENST00000548938 KCNN4O15554 427 aa14.21□□□□□ -0.13
HDAC7-228ENST00000548938 CCNT2O60583 730 aaKnown RBP14.21□□□□□ -0.13
HDAC7-228ENST00000548938 KRT38O76015 456 aa14.21□□□□□ -0.13
HDAC7-228ENST00000548938 TRUB2O95900 331 aaKnown RBP14.21□□□□□ -0.13
HDAC7-228ENST00000548938 APOEP02649 317 aa14.21□□□□□ -0.13
HDAC7-228ENST00000548938 APRTP07741 180 aa14.21□□□□□ -0.13
HDAC7-228ENST00000548938 RAP1GAPP47736 663 aa14.21□□□□□ -0.13
HDAC7-228ENST00000548938 CDH6P55285 790 aa14.21□□□□□ -0.13
HDAC7-228ENST00000548938 SH3PXD2AQ5TCZ1 1133 aa14.21□□□□□ -0.13
HDAC7-228ENST00000548938 WDR78Q5VTH9 848 aa14.21□□□□□ -0.13
HDAC7-228ENST00000548938 PRAMEF18Q5VWM3 479 aa14.21□□□□□ -0.13
HDAC7-228ENST00000548938 DPY19L2Q6NUT2 758 aa14.21□□□□□ -0.13
HDAC7-228ENST00000548938 UNC5AQ6ZN44 842 aa14.21□□□□□ -0.13
HDAC7-228ENST00000548938 ADGRF2Q8IZF7 708 aa14.21□□□□□ -0.13
HDAC7-228ENST00000548938 EFCAB3Q8N7B9 438 aa14.21□□□□□ -0.13
HDAC7-228ENST00000548938 PPP1R14CQ8TAE6 165 aa14.21□□□□□ -0.13
HDAC7-228ENST00000548938 TRPM4Q8TD43 1214 aa14.21□□□□□ -0.13
HDAC7-228ENST00000548938 PORCNQ9H237 461 aa14.21□□□□□ -0.13
HDAC7-228ENST00000548938 RSAD1Q9HA92 442 aa14.21□□□□□ -0.13
HDAC7-228ENST00000548938 USP29Q9HBJ7 922 aa14.21□□□□□ -0.13
HDAC7-228ENST00000548938 THAP1Q9NVV9 213 aa14.21□□□□□ -0.13
HDAC7-228ENST00000548938 MAP3K20Q9NYL2 800 aaKnown RBP14.21□□□□□ -0.13
HDAC7-228ENST00000548938 RIPK3Q9Y572 518 aa14.21□□□□□ -0.13
HDAC7-228ENST00000548938 SLC15A5A6NIM6 579 aa14.21□□□□□ -0.14
HDAC7-228ENST00000548938 PROCP04070 461 aa14.21□□□□□ -0.14
HDAC7-228ENST00000548938 VCLP18206 1134 aa14.21□□□□□ -0.14
HDAC7-228ENST00000548938 CRHR1P34998 444 aa14.21□□□□□ -0.14
HDAC7-228ENST00000548938 NAMPTP43490 491 aa14.21□□□□□ -0.14
HDAC7-228ENST00000548938 ASPAP45381 313 aa14.21□□□□□ -0.14
HDAC7-228ENST00000548938 COPAP53621 1224 aa14.21□□□□□ -0.14
HDAC7-228ENST00000548938 YWHAEP62258 255 aaKnown RBP14.21□□□□□ -0.14
HDAC7-228ENST00000548938 RPL10AP62906 217 aaKnown RBP14.21□□□□□ -0.14
HDAC7-228ENST00000548938 PEX6Q13608 980 aa14.21□□□□□ -0.14
HDAC7-228ENST00000548938 GRM2Q14416 872 aa14.21□□□□□ -0.14
HDAC7-228ENST00000548938 TRIP10Q15642 601 aa14.21□□□□□ -0.14
HDAC7-228ENST00000548938 XKR3Q5GH77 459 aa14.21□□□□□ -0.14
HDAC7-228ENST00000548938 C16orf46Q6P387 395 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms