RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 H2AFVQ71UI9 128 aa22.05■■□□□ 1.12
CACNB3-210ENST00000548874 DEFB106AQ8N104 65 aa22.05■■□□□ 1.12
CACNB3-210ENST00000548874 TDRD5Q8NAT2 981 aaKnown RBP22.05■■□□□ 1.12
CACNB3-210ENST00000548874 ACSF2Q96CM8 615 aaPredicted RBP22.05■■□□□ 1.12
CACNB3-210ENST00000548874 TRPV4Q9HBA0 871 aa22.05■■□□□ 1.12
CACNB3-210ENST00000548874 PARVAQ9NVD7 372 aa22.05■■□□□ 1.12
CACNB3-210ENST00000548874 NUP210Q8TEM1 1887 aaPredicted RBP22.05■■□□□ 1.12
CACNB3-210ENST00000548874 GJB6O95452 261 aa22.04■■□□□ 1.12
CACNB3-210ENST00000548874 CYP1A2P05177 515 aa22.04■■□□□ 1.12
CACNB3-210ENST00000548874 CKMP06732 381 aa22.04■■□□□ 1.12
CACNB3-210ENST00000548874 KRT3P12035 628 aa22.04■■□□□ 1.12
CACNB3-210ENST00000548874 FCARP24071 287 aa22.04■■□□□ 1.12
CACNB3-210ENST00000548874 FLT3P36888 993 aa22.04■■□□□ 1.12
CACNB3-210ENST00000548874 AVPR1AP37288 418 aa22.04■■□□□ 1.12
CACNB3-210ENST00000548874 MATKP42679 507 aa22.04■■□□□ 1.12
CACNB3-210ENST00000548874 RSRC2Q7L4I2 434 aaKnown RBP22.04■■□□□ 1.12
CACNB3-210ENST00000548874 ARID3BQ8IVW6 561 aaPredicted RBP22.04■■□□□ 1.12
CACNB3-210ENST00000548874 JOSD2Q8TAC2 188 aa22.04■■□□□ 1.12
CACNB3-210ENST00000548874 DQX1Q8TE96 717 aaKnown RBP22.04■■□□□ 1.12
CACNB3-210ENST00000548874 RNF139Q8WU17 664 aa22.04■■□□□ 1.12
CACNB3-210ENST00000548874 SMARCD2Q92925 531 aa22.04■■□□□ 1.12
CACNB3-210ENST00000548874 USP13Q92995 863 aaPredicted RBP22.04■■□□□ 1.12
CACNB3-210ENST00000548874 ZFRQ96KR1 1074 aaKnown RBP22.04■■□□□ 1.12
CACNB3-210ENST00000548874 ASB2Q96Q27 587 aa22.04■■□□□ 1.12
CACNB3-210ENST00000548874 SELENOOQ9BVL4 669 aa22.04■■□□□ 1.12
CACNB3-210ENST00000548874 SMOC2Q9H3U7 446 aa22.04■■□□□ 1.12
CACNB3-210ENST00000548874 PRKAG3Q9UGI9 489 aa22.04■■□□□ 1.12
CACNB3-210ENST00000548874 DNMT3LQ9UJW3 386 aa22.04■■□□□ 1.12
CACNB3-210ENST00000548874 INTUQ9ULD6 942 aa22.04■■□□□ 1.12
CACNB3-210ENST00000548874 ARHGAP26Q9UNA1 814 aa22.04■■□□□ 1.12
CACNB3-210ENST00000548874 NR2E1Q9Y466 385 aa22.04■■□□□ 1.12
CACNB3-210ENST00000548874 COL6A3P12111 3177 aa22.04■■□□□ 1.12
CACNB3-210ENST00000548874 CAPN9O14815 690 aa22.03■■□□□ 1.12
CACNB3-210ENST00000548874 MDM4O15151 490 aa22.03■■□□□ 1.12
CACNB3-210ENST00000548874 ARHGAP6O43182 974 aa22.03■■□□□ 1.12
CACNB3-210ENST00000548874 PRAMEF12O95522 483 aa22.03■■□□□ 1.12
CACNB3-210ENST00000548874 TMEM253P0C7T8 217 aa22.03■■□□□ 1.12
CACNB3-210ENST00000548874 SP100P23497 879 aaPredicted RBP22.03■■□□□ 1.12
CACNB3-210ENST00000548874 NOS2P35228 1153 aa22.03■■□□□ 1.12
CACNB3-210ENST00000548874 GPC5P78333 572 aa22.03■■□□□ 1.12
CACNB3-210ENST00000548874 SPA17Q15506 151 aa22.03■■□□□ 1.12
CACNB3-210ENST00000548874 DCAF6Q58WW2 860 aa22.03■■□□□ 1.12
CACNB3-210ENST00000548874 ZDHHC14Q8IZN3 488 aa22.03■■□□□ 1.12
CACNB3-210ENST00000548874 NT5C3BQ969T7 300 aa22.03■■□□□ 1.12
CACNB3-210ENST00000548874 ARHGEF26Q96DR7 871 aa22.03■■□□□ 1.12
CACNB3-210ENST00000548874 DDX23Q9BUQ8 820 aaKnown RBP22.03■■□□□ 1.12
CACNB3-210ENST00000548874 SMG9Q9H0W8 520 aaKnown RBP22.03■■□□□ 1.12
CACNB3-210ENST00000548874 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.03■■□□□ 1.12
CACNB3-210ENST00000548874 MARCH2Q9P0N8 246 aa22.03■■□□□ 1.12
CACNB3-210ENST00000548874 REXO2Q9Y3B8 237 aaKnown RBP22.03■■□□□ 1.12
CACNB3-210ENST00000548874 SCINQ9Y6U3 715 aa22.03■■□□□ 1.12
CACNB3-210ENST00000548874 C2CD4BA6NLJ0 364 aa22.02■■□□□ 1.12
CACNB3-210ENST00000548874 LOC730098B7Z3J9 87 aa22.02■■□□□ 1.12
CACNB3-210ENST00000548874 IGLV3-25P01717 112 aa22.02■■□□□ 1.12
CACNB3-210ENST00000548874 MBL2P11226 248 aaPredicted RBP22.02■■□□□ 1.12
CACNB3-210ENST00000548874 BMP1P13497 986 aa22.02■■□□□ 1.12
CACNB3-210ENST00000548874 TCF3P15923 654 aa22.02■■□□□ 1.12
CACNB3-210ENST00000548874 RFC1P35251 1148 aaPredicted RBP22.02■■□□□ 1.12
CACNB3-210ENST00000548874 MAGEA1P43355 309 aa22.02■■□□□ 1.12
CACNB3-210ENST00000548874 RNASE9P60153 205 aaKnown RBP22.02■■□□□ 1.12
CACNB3-210ENST00000548874 ZXDBP98169 803 aa22.02■■□□□ 1.12
CACNB3-210ENST00000548874 EFEMP1Q12805 493 aa22.02■■□□□ 1.12
CACNB3-210ENST00000548874 ADHFE1Q8IWW8 467 aa22.02■■□□□ 1.12
CACNB3-210ENST00000548874 PLCD3Q8N3E9 789 aa22.02■■□□□ 1.12
CACNB3-210ENST00000548874 EMC1Q8N766 993 aa22.02■■□□□ 1.12
CACNB3-210ENST00000548874 CTNNBL1Q8WYA6 563 aaPredicted RBP22.02■■□□□ 1.12
CACNB3-210ENST00000548874 RPGRIP1Q96KN7 1286 aa22.02■■□□□ 1.12
CACNB3-210ENST00000548874 NPY6RQ99463 290 aa22.02■■□□□ 1.12
CACNB3-210ENST00000548874 KLF16Q9BXK1 252 aaPredicted RBP22.02■■□□□ 1.12
CACNB3-210ENST00000548874 NACA2Q9H009 215 aa22.02■■□□□ 1.12
CACNB3-210ENST00000548874 KIF9Q9HAQ2 790 aa22.02■■□□□ 1.12
CACNB3-210ENST00000548874 TDP1Q9NUW8 608 aa22.02■■□□□ 1.12
CACNB3-210ENST00000548874 RRN3Q9NYV6 651 aa22.02■■□□□ 1.12
CACNB3-210ENST00000548874 MYO1AQ9UBC5 1043 aa22.02■■□□□ 1.12
CACNB3-210ENST00000548874 RASAL2Q9UJF2 1139 aa22.02■■□□□ 1.12
CACNB3-210ENST00000548874 CCL26Q9Y258 94 aa22.02■■□□□ 1.12
CACNB3-210ENST00000548874 PCDHA13Q9Y5I0 950 aa22.02■■□□□ 1.12
CACNB3-210ENST00000548874 CPQQ9Y646 472 aa22.02■■□□□ 1.12
CACNB3-210ENST00000548874 ANHXE9PGG2 379 aa22.01■■□□□ 1.11
CACNB3-210ENST00000548874 PTMAP06454 111 aaKnown RBP22.01■■□□□ 1.11
CACNB3-210ENST00000548874 RPL7AP62424 266 aaKnown RBP22.01■■□□□ 1.11
CACNB3-210ENST00000548874 PITX1P78337 314 aaPredicted RBP22.01■■□□□ 1.11
CACNB3-210ENST00000548874 ZP2Q05996 745 aa22.01■■□□□ 1.11
CACNB3-210ENST00000548874 EIF4EBP2Q13542 120 aaPredicted RBP22.01■■□□□ 1.11
CACNB3-210ENST00000548874 OTUD1Q5VV17 481 aaPredicted RBP22.01■■□□□ 1.11
CACNB3-210ENST00000548874 TAC4Q86UU9 113 aa22.01■■□□□ 1.11
CACNB3-210ENST00000548874 ADAMTS19Q8TE59 1207 aa22.01■■□□□ 1.11
CACNB3-210ENST00000548874 RSPRY1Q96DX4 576 aa22.01■■□□□ 1.11
CACNB3-210ENST00000548874 MCEEQ96PE7 176 aa22.01■■□□□ 1.11
CACNB3-210ENST00000548874 ADAM33Q9BZ11 813 aa22.01■■□□□ 1.11
CACNB3-210ENST00000548874 MRPL47Q9HD33 250 aaKnown RBP22.01■■□□□ 1.11
CACNB3-210ENST00000548874 OBP2AQ9NY56 170 aa22.01■■□□□ 1.11
CACNB3-210ENST00000548874 SFMBT1Q9UHJ3 866 aa22.01■■□□□ 1.11
CACNB3-210ENST00000548874 STAP1Q9ULZ2 295 aa22.01■■□□□ 1.11
CACNB3-210ENST00000548874 HELZP42694 1942 aaKnown RBP22.01■■□□□ 1.11
CACNB3-210ENST00000548874 TMEM191CA6NGB0 347 aa22■■□□□ 1.11
CACNB3-210ENST00000548874 DPYSL4O14531 572 aa22■■□□□ 1.11
CACNB3-210ENST00000548874 IPO7O95373 1038 aaKnown RBP22■■□□□ 1.11
CACNB3-210ENST00000548874 TRUB2O95900 331 aaKnown RBP22■■□□□ 1.11
CACNB3-210ENST00000548874 VIPR2P41587 438 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms