RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 DHX35Q9H5Z1 703 aaKnown RBP16.12■□□□□ 0.17
BRF1-212ENST00000547562 ETNK1Q9HBU6 452 aa16.12■□□□□ 0.17
BRF1-212ENST00000547562 GDAP2Q9NXN4 497 aa16.12■□□□□ 0.17
BRF1-212ENST00000547562 ZNF236Q9UL36 1845 aa16.12■□□□□ 0.17
BRF1-212ENST00000547562 IQCA1LA6NCM1 817 aa16.11■□□□□ 0.17
BRF1-212ENST00000547562 SPTLC1O15269 473 aa16.11■□□□□ 0.17
BRF1-212ENST00000547562 ECM2O94769 699 aaPredicted RBP16.11■□□□□ 0.17
BRF1-212ENST00000547562 APRTP07741 180 aa16.11■□□□□ 0.17
BRF1-212ENST00000547562 LCP1P13796 627 aa16.11■□□□□ 0.17
BRF1-212ENST00000547562 CCNB1P14635 433 aa16.11■□□□□ 0.17
BRF1-212ENST00000547562 SETDB1Q15047 1291 aa16.11■□□□□ 0.17
BRF1-212ENST00000547562 C4orf22Q6V702 233 aa16.11■□□□□ 0.17
BRF1-212ENST00000547562 OTOAQ7RTW8 1153 aa16.11■□□□□ 0.17
BRF1-212ENST00000547562 LRRN4Q8WUT4 740 aa16.11■□□□□ 0.17
BRF1-212ENST00000547562 TMEM40Q8WWA1 233 aa16.11■□□□□ 0.17
BRF1-212ENST00000547562 CFAP36Q96G28 342 aa16.11■□□□□ 0.17
BRF1-212ENST00000547562 VPS11Q9H270 941 aa16.11■□□□□ 0.17
BRF1-212ENST00000547562 POPDC2Q9HBU9 364 aa16.11■□□□□ 0.17
BRF1-212ENST00000547562 ARHGEF3Q9NR81 526 aa16.11■□□□□ 0.17
BRF1-212ENST00000547562 KLK14Q9P0G3 267 aa16.11■□□□□ 0.17
BRF1-212ENST00000547562 SLC17A7Q9P2U7 560 aa16.11■□□□□ 0.17
BRF1-212ENST00000547562 AP4E1Q9UPM8 1137 aa16.11■□□□□ 0.17
BRF1-212ENST00000547562 GNEQ9Y223 722 aaKnown RBP16.11■□□□□ 0.17
BRF1-212ENST00000547562 PIN4Q9Y237 131 aaKnown RBP16.11■□□□□ 0.17
BRF1-212ENST00000547562 C1QAP02745 245 aa16.11■□□□□ 0.17
BRF1-212ENST00000547562 ALADP13716 330 aa16.11■□□□□ 0.17
BRF1-212ENST00000547562 ZFXP17010 805 aaPredicted RBP16.11■□□□□ 0.17
BRF1-212ENST00000547562 PNPLA4P41247 253 aa16.11■□□□□ 0.17
BRF1-212ENST00000547562 GBE1Q04446 702 aa16.11■□□□□ 0.17
BRF1-212ENST00000547562 FAAP100Q0VG06 881 aa16.11■□□□□ 0.17
BRF1-212ENST00000547562 RIPK1Q13546 671 aa16.11■□□□□ 0.17
BRF1-212ENST00000547562 HIC1Q14526 733 aa16.11■□□□□ 0.17
BRF1-212ENST00000547562 SLC45A4Q5BKX6 768 aa16.11■□□□□ 0.17
BRF1-212ENST00000547562 PRPF39Q86UA1 669 aaKnown RBP16.11■□□□□ 0.17
BRF1-212ENST00000547562 C10orf82Q8WW14 230 aa16.11■□□□□ 0.17
BRF1-212ENST00000547562 DNAJB3Q8WWF6 145 aa16.11■□□□□ 0.17
BRF1-212ENST00000547562 SERAC1Q96JX3 654 aa16.11■□□□□ 0.17
BRF1-212ENST00000547562 MYLK2Q9H1R3 596 aa16.11■□□□□ 0.17
BRF1-212ENST00000547562 SNX25Q9H3E2 840 aa16.11■□□□□ 0.17
BRF1-212ENST00000547562 C12orf65Q9H3J6 166 aaKnown RBP16.11■□□□□ 0.17
BRF1-212ENST00000547562 MTMR10Q9NXD2 777 aa16.11■□□□□ 0.17
BRF1-212ENST00000547562 GTF2IRD1Q9UHL9 959 aa16.11■□□□□ 0.17
BRF1-212ENST00000547562 CLEC11AQ9Y240 323 aa16.11■□□□□ 0.17
BRF1-212ENST00000547562 CHKBQ9Y259 395 aa16.11■□□□□ 0.17
BRF1-212ENST00000547562 TTLL3Q9Y4R7 772 aa16.11■□□□□ 0.17
BRF1-212ENST00000547562 DCAF8L1A6NGE4 600 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 SLC15A5A6NIM6 579 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 LPXNO60711 386 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 UNC5CO95185 931 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 KCNE1P15382 129 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 ACADSBP45954 432 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 GTF2A1P52655 376 aaPredicted RBP16.1■□□□□ 0.17
BRF1-212ENST00000547562 SLC10A2Q12908 348 aaPredicted RBP16.1■□□□□ 0.17
BRF1-212ENST00000547562 MFSD10Q14728 455 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 SNX17Q15036 470 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 XKR4Q5GH76 650 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 PRAMEF19Q5SWL8 479 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 ZNF618Q5T7W0 954 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 MCUQ8NE86 351 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 SLC2A14Q8TDB8 520 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 HSFY1Q96LI6 401 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 LRRC37BQ96QE4 947 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 ZC3H7BQ9UGR2 993 aaKnown RBP16.1■□□□□ 0.17
BRF1-212ENST00000547562 WDR91A4D1P6 747 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 XPOTO43592 962 aaKnown RBP16.1■□□□□ 0.17
BRF1-212ENST00000547562 GCATO75600 419 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 DCTN3O75935 186 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 TOMM70O94826 608 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 ALDH3A1P30838 453 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 NR2C2P49116 596 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 TAF6P49848 677 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 NEK3P51956 506 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 ADAM17P78536 824 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 SLC18A2Q05940 514 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 SH2D5Q6ZV89 423 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 LIMS2Q7Z4I7 341 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 SLC26A11Q86WA9 606 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 KIF2BQ8N4N8 673 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 APPL2Q8NEU8 664 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 ERP27Q96DN0 273 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 APOPT1Q96IL0 206 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 CSPG4P5Q96PW8 444 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 KCTD15Q96SI1 283 aaPredicted RBP16.1■□□□□ 0.17
BRF1-212ENST00000547562 MAGEB5Q9BZ81 275 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 RNF39Q9H2S5 420 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 NOD2Q9HC29 1040 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 SLC5A4Q9NY91 659 aa16.1■□□□□ 0.17
BRF1-212ENST00000547562 MYO18AQ92614 2054 aaKnown RBP16.1■□□□□ 0.17
BRF1-212ENST00000547562 ZNF638Q14966 1978 aaKnown RBP16.1■□□□□ 0.17
BRF1-212ENST00000547562 VPS52Q8N1B4 723 aa16.09■□□□□ 0.17
BRF1-212ENST00000547562 CCDC185Q8N715 623 aa16.09■□□□□ 0.17
BRF1-212ENST00000547562 UPF1Q92900 1129 aaKnown RBP eCLIP16.09■□□□□ 0.178e-7■■□□□ 11.6
BRF1-212ENST00000547562 LRRC39Q96DD0 335 aa16.09■□□□□ 0.17
BRF1-212ENST00000547562 QKIQ96PU8 341 aaKnown RBP eCLIP16.09■□□□□ 0.17
BRF1-212ENST00000547562 PTPN18Q99952 460 aa16.09■□□□□ 0.17
BRF1-212ENST00000547562 PLAC1Q9HBJ0 212 aa16.09■□□□□ 0.17
BRF1-212ENST00000547562 GOLGA2P5Q9HBQ8 144 aa16.09■□□□□ 0.17
BRF1-212ENST00000547562 TXLNGQ9NUQ3 528 aa16.09■□□□□ 0.17
BRF1-212ENST00000547562 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.09■□□□□ 0.17
BRF1-212ENST00000547562 BAIAP2L1Q9UHR4 511 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms