RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 ZNF248Q8NDW4 579 aa11.46□□□□□ -0.57
TMEM116-203ENST00000546537 PDZD8Q8NEN9 1154 aa11.46□□□□□ -0.57
TMEM116-203ENST00000546537 KBTBD7Q8WVZ9 684 aa11.46□□□□□ -0.57
TMEM116-203ENST00000546537 OVCA2Q8WZ82 227 aa11.46□□□□□ -0.57
TMEM116-203ENST00000546537 SNX19Q92543 992 aa11.46□□□□□ -0.57
TMEM116-203ENST00000546537 PRCCQ92733 491 aaPredicted RBP11.46□□□□□ -0.57
TMEM116-203ENST00000546537 MED8Q96G25 268 aa11.46□□□□□ -0.57
TMEM116-203ENST00000546537 CNDP2Q96KP4 475 aaKnown RBP11.46□□□□□ -0.57
TMEM116-203ENST00000546537 FIZ1Q96SL8 496 aa11.46□□□□□ -0.57
TMEM116-203ENST00000546537 LGMNQ99538 433 aa11.46□□□□□ -0.57
TMEM116-203ENST00000546537 REEP2Q9BRK0 252 aa11.46□□□□□ -0.57
TMEM116-203ENST00000546537 BBS2Q9BXC9 721 aa11.46□□□□□ -0.57
TMEM116-203ENST00000546537 TRIM9Q9C026 710 aa11.46□□□□□ -0.57
TMEM116-203ENST00000546537 CPNE5Q9HCH3 593 aa11.46□□□□□ -0.57
TMEM116-203ENST00000546537 WDR35Q9P2L0 1181 aa11.46□□□□□ -0.57
TMEM116-203ENST00000546537 ITGA11Q9UKX5 1188 aa11.46□□□□□ -0.57
TMEM116-203ENST00000546537 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.46□□□□□ -0.57
TMEM116-203ENST00000546537 PLXNA2O75051 1894 aa11.46□□□□□ -0.58
TMEM116-203ENST00000546537 A0A1B0GTQ1 180 aa11.45□□□□□ -0.58
TMEM116-203ENST00000546537 LAD1O00515 517 aa11.45□□□□□ -0.58
TMEM116-203ENST00000546537 NPC1O15118 1278 aa11.45□□□□□ -0.58
TMEM116-203ENST00000546537 GREM1O60565 184 aa11.45□□□□□ -0.58
TMEM116-203ENST00000546537 ACADMP11310 421 aa11.45□□□□□ -0.58
TMEM116-203ENST00000546537 ACO1P21399 889 aaKnown RBP11.45□□□□□ -0.58
TMEM116-203ENST00000546537 YWHAQP27348 245 aa11.45□□□□□ -0.58
TMEM116-203ENST00000546537 PRPHP41219 470 aa11.45□□□□□ -0.58
TMEM116-203ENST00000546537 TUBP50607 506 aa11.45□□□□□ -0.58
TMEM116-203ENST00000546537 CACNA2D1P54289 1103 aa11.45□□□□□ -0.58
TMEM116-203ENST00000546537 IFRD2Q12894 506 aaPredicted RBP11.45□□□□□ -0.58
TMEM116-203ENST00000546537 KCNT1Q5JUK3 1230 aa11.45□□□□□ -0.58
TMEM116-203ENST00000546537 COLEC12Q5KU26 742 aa11.45□□□□□ -0.58
TMEM116-203ENST00000546537 HECTD3Q5T447 861 aa11.45□□□□□ -0.58
TMEM116-203ENST00000546537 BROXQ5VW32 411 aa11.45□□□□□ -0.58
TMEM116-203ENST00000546537 LAYNQ6UX15 382 aa11.45□□□□□ -0.58
TMEM116-203ENST00000546537 DTHD1Q6ZMT9 781 aa11.45□□□□□ -0.58
TMEM116-203ENST00000546537 HTR3DQ70Z44 454 aa11.45□□□□□ -0.58
TMEM116-203ENST00000546537 MYCBPAPQ8TBZ2 947 aa11.45□□□□□ -0.58
TMEM116-203ENST00000546537 CACTINQ8WUQ7 758 aaKnown RBP11.45□□□□□ -0.58
TMEM116-203ENST00000546537 TSC1Q92574 1164 aa11.45□□□□□ -0.58
TMEM116-203ENST00000546537 PLIN2Q99541 437 aa11.45□□□□□ -0.58
TMEM116-203ENST00000546537 C6orf106Q9H6K1 298 aaPredicted RBP11.45□□□□□ -0.58
TMEM116-203ENST00000546537 PARVGQ9HBI0 331 aa11.45□□□□□ -0.58
TMEM116-203ENST00000546537 TMEM30AQ9NV96 361 aa11.45□□□□□ -0.58
TMEM116-203ENST00000546537 IL17BQ9UHF5 180 aa11.45□□□□□ -0.58
TMEM116-203ENST00000546537 NOL7Q9UMY1 257 aaKnown RBP11.45□□□□□ -0.58
TMEM116-203ENST00000546537 FAM13AO94988 1023 aa11.44□□□□□ -0.58
TMEM116-203ENST00000546537 KRT19P08727 400 aa11.44□□□□□ -0.58
TMEM116-203ENST00000546537 PDGFRBP09619 1106 aa11.44□□□□□ -0.58
TMEM116-203ENST00000546537 IRF1P10914 325 aa11.44□□□□□ -0.58
TMEM116-203ENST00000546537 ADSSP30520 456 aa11.44□□□□□ -0.58
TMEM116-203ENST00000546537 TOB1P50616 345 aaPredicted RBP11.44□□□□□ -0.58
TMEM116-203ENST00000546537 RBP5P82980 135 aa11.44□□□□□ -0.58
TMEM116-203ENST00000546537 TPGS1Q6ZTW0 290 aa11.44□□□□□ -0.58
TMEM116-203ENST00000546537 GATAD2AQ86YP4 633 aa11.44□□□□□ -0.58
TMEM116-203ENST00000546537 NUP93Q8N1F7 819 aa11.44□□□□□ -0.58
TMEM116-203ENST00000546537 SNRNP27Q8WVK2 155 aaKnown RBP11.44□□□□□ -0.58
TMEM116-203ENST00000546537 POMGNT1Q8WZA1 660 aa11.44□□□□□ -0.58
TMEM116-203ENST00000546537 FBXO32Q969P5 355 aa11.44□□□□□ -0.58
TMEM116-203ENST00000546537 IKZF4Q9H2S9 585 aa11.44□□□□□ -0.58
TMEM116-203ENST00000546537 CCSER2Q9H7U1 834 aa11.44□□□□□ -0.58
TMEM116-203ENST00000546537 THAP10Q9P2Z0 257 aaPredicted RBP11.44□□□□□ -0.58
TMEM116-203ENST00000546537 CHORDC1Q9UHD1 332 aaPredicted RBP11.44□□□□□ -0.58
TMEM116-203ENST00000546537 SIX4Q9UIU6 781 aa11.44□□□□□ -0.58
TMEM116-203ENST00000546537 FBXO10Q9UK96 956 aa11.44□□□□□ -0.58
TMEM116-203ENST00000546537 SYNCRIPO60506 623 aaKnown RBP11.43□□□□□ -0.58
TMEM116-203ENST00000546537 RTN3O95197 1032 aaPredicted RBP11.43□□□□□ -0.58
TMEM116-203ENST00000546537 GLDCP23378 1020 aa11.43□□□□□ -0.58
TMEM116-203ENST00000546537 WARSP23381 471 aaKnown RBP11.43□□□□□ -0.58
TMEM116-203ENST00000546537 ACSL1P33121 698 aa11.43□□□□□ -0.58
TMEM116-203ENST00000546537 PCBP4P57723 403 aaKnown RBP11.43□□□□□ -0.58
TMEM116-203ENST00000546537 POSTNQ15063 836 aa11.43□□□□□ -0.58
TMEM116-203ENST00000546537 TMEM119Q4V9L6 283 aa11.43□□□□□ -0.58
TMEM116-203ENST00000546537 MDH1BQ5I0G3 518 aa11.43□□□□□ -0.58
TMEM116-203ENST00000546537 HS2ST1Q7LGA3 356 aa11.43□□□□□ -0.58
TMEM116-203ENST00000546537 FAM124AQ86V42 546 aa11.43□□□□□ -0.58
TMEM116-203ENST00000546537 BRSK2Q8IWQ3 736 aa11.43□□□□□ -0.58
TMEM116-203ENST00000546537 RFFLQ8WZ73 363 aa11.43□□□□□ -0.58
TMEM116-203ENST00000546537 BIRC7Q96CA5 298 aa11.43□□□□□ -0.58
TMEM116-203ENST00000546537 NAF1Q96HR8 494 aaKnown RBP11.43□□□□□ -0.58
TMEM116-203ENST00000546537 HIC2Q96JB3 615 aa11.43□□□□□ -0.58
TMEM116-203ENST00000546537 C8orf76Q96K31 380 aa11.43□□□□□ -0.58
TMEM116-203ENST00000546537 FAM84AQ96KN4 292 aa11.43□□□□□ -0.58
TMEM116-203ENST00000546537 ST6GALNAC4Q9H4F1 302 aa11.43□□□□□ -0.58
TMEM116-203ENST00000546537 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.43□□□□□ -0.58
TMEM116-203ENST00000546537 NXF1Q9UBU9 619 aaKnown RBP11.43□□□□□ -0.58
TMEM116-203ENST00000546537 CLCA2Q9UQC9 943 aa11.43□□□□□ -0.58
TMEM116-203ENST00000546537 SLC27A6Q9Y2P4 619 aa11.43□□□□□ -0.58
TMEM116-203ENST00000546537 TEX15Q9BXT5 2789 aa11.42□□□□□ -0.58
TMEM116-203ENST00000546537 PTPRJQ12913 1337 aa11.42□□□□□ -0.58
TMEM116-203ENST00000546537 TSPAN3O60637 253 aa11.42□□□□□ -0.58
TMEM116-203ENST00000546537 ZDHHC11BP0C7U3 371 aa11.42□□□□□ -0.58
TMEM116-203ENST00000546537 C7P10643 843 aa11.42□□□□□ -0.58
TMEM116-203ENST00000546537 CD27P26842 260 aa11.42□□□□□ -0.58
TMEM116-203ENST00000546537 CDH8P55286 799 aa11.42□□□□□ -0.58
TMEM116-203ENST00000546537 VAC14Q08AM6 782 aa11.42□□□□□ -0.58
TMEM116-203ENST00000546537 ILKQ13418 452 aa11.42□□□□□ -0.58
TMEM116-203ENST00000546537 PRICKLE2Q7Z3G6 844 aa11.42□□□□□ -0.58
TMEM116-203ENST00000546537 ADAT2Q7Z6V5 191 aaKnown RBP11.42□□□□□ -0.58
TMEM116-203ENST00000546537 GPBP1Q86WP2 473 aa11.42□□□□□ -0.58
TMEM116-203ENST00000546537 CACUL1Q86Y37 369 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms