RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 UBXN6Q9BZV1 441 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 SPATC1LQ9H0A9 340 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 VTA1Q9NP79 307 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 ABI2Q9NYB9 513 aaPredicted RBP12.89□□□□□ -0.35
COL4A6-209ENST00000545689 CXCL11O14625 94 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 CXCL8P10145 99 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 HOXB8P17481 243 aaPredicted RBP12.89□□□□□ -0.35
COL4A6-209ENST00000545689 CRABP2P29373 138 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 OXCT1P55809 520 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.89□□□□□ -0.35
COL4A6-209ENST00000545689 FBXO16Q8IX29 292 aaPredicted RBP12.89□□□□□ -0.35
COL4A6-209ENST00000545689 DNAJC18Q9H819 358 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 SELENONQ9NZV5 590 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 ZBTB39O15060 712 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 ZSCAN9O15535 394 aaPredicted RBP12.89□□□□□ -0.35
COL4A6-209ENST00000545689 STRNO43815 780 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 MICAL2O94851 1124 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 ABHD2P08910 425 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 ATP6V1E1P36543 226 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 TRPC1P48995 793 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 FOXD4Q12950 439 aaPredicted RBP12.89□□□□□ -0.35
COL4A6-209ENST00000545689 APOBEC3HQ6NTF7 200 aaKnown RBP12.89□□□□□ -0.35
COL4A6-209ENST00000545689 PPP2R3CQ969Q6 453 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 TUBGCP3Q96CW5 907 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 FICDQ9BVA6 458 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 KLK14Q9P0G3 267 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 ZNF229Q9UJW7 825 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 CDV3Q9UKY7 258 aaKnown RBP12.89□□□□□ -0.35
COL4A6-209ENST00000545689 ASMTLO95671 621 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 DEFA1P59665 94 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 DEFA3P59666 94 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 POLD3Q15054 466 aaPredicted RBP12.89□□□□□ -0.35
COL4A6-209ENST00000545689 BMT2Q1RMZ1 405 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 C2CD6Q53TS8 623 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 CDR2LQ86X02 465 aaPredicted RBP12.89□□□□□ -0.35
COL4A6-209ENST00000545689 CPB2Q96IY4 423 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 BTBD10Q9BSF8 475 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 TSPAN16Q9UKR8 245 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 SASH3O75995 380 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 FSBPO95073 299 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 IRF1P10914 325 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 SERPINB5P36952 375 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 GTF2BQ00403 316 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 ORC1Q13415 861 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 PRAMEF18Q5VWM3 479 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 APOL5Q9BWW9 433 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 SCUBE2Q9NQ36 999 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 GIMAP4Q9NUV9 329 aa12.89□□□□□ -0.35
COL4A6-209ENST00000545689 PSMD10O75832 226 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 FGRP09769 529 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 FAM153BP0C7A2 387 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 ALDH5A1P51649 535 aaPredicted RBP12.88□□□□□ -0.35
COL4A6-209ENST00000545689 DRG2P55039 364 aaKnown RBP12.88□□□□□ -0.35
COL4A6-209ENST00000545689 NUP107P57740 925 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 FAM153CQ494X1 144 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 GLRA4Q5JXX5 417 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 SLC27A1Q6PCB7 646 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 MYO1HQ8N1T3 1032 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 FBXO32Q969P5 355 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 EMILIN2Q9BXX0 1053 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 ASCC2Q9H1I8 757 aaPredicted RBP12.88□□□□□ -0.35
COL4A6-209ENST00000545689 FAM153AQ9UHL3 310 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 A0A087WZ62 844 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 SERPINB3P29508 390 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 ELK3P41970 407 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 CDH18Q13634 790 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 NFE2Q16621 373 aaPredicted RBP12.88□□□□□ -0.35
COL4A6-209ENST00000545689 ZCWPW2Q504Y3 356 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 SLC30A10Q6XR72 485 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 KYAT3Q6YP21 454 aaKnown RBP12.88□□□□□ -0.35
COL4A6-209ENST00000545689 LRRN4CLQ8ND94 238 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 BLOC1S5Q8TDH9 187 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 HTR3CQ8WXA8 447 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 VPS50Q96JG6 964 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 FDXACB1Q9BRP7 624 aaPredicted RBP12.88□□□□□ -0.35
COL4A6-209ENST00000545689 MROH7Q68CQ1 1323 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 PGK2P07205 417 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 TPBGLP0DKB5 382 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 PSMC3P17980 439 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 ANXA11P50995 505 aaKnown RBP12.88□□□□□ -0.35
COL4A6-209ENST00000545689 RENBPP51606 427 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 CSTF3Q12996 717 aaKnown RBP12.88□□□□□ -0.35
COL4A6-209ENST00000545689 MTM1Q13496 603 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 DACT2Q5SW24 774 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 INPP5DQ92835 1189 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 AAASQ9NRG9 546 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 GLP2RO95838 553 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 VTNP04004 478 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 HNRNPCP07910 306 aaKnown RBP eCLIP12.88□□□□□ -0.35
COL4A6-209ENST00000545689 PECAM1P16284 738 aaPredicted RBP12.88□□□□□ -0.35
COL4A6-209ENST00000545689 AVPR1AP37288 418 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 TKTL1P51854 596 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 REPS2Q8NFH8 660 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 DDX4Q9NQI0 724 aaKnown RBP12.88□□□□□ -0.35
COL4A6-209ENST00000545689 TMEM161AQ9NX61 479 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 STARD13Q9Y3M8 1113 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 NFASCO94856 1347 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 M0R3G1 203 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 CHADO15335 359 aa12.88□□□□□ -0.35
COL4A6-209ENST00000545689 SLC1A6P48664 564 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms