RNA–Protein interactions for RNA: ENST00000545399.5

ATP1A3-208, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ATP1A3, Length 3,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-208ENST00000545399 BDNFP23560 247 aa12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 ALDH18A1P54886 795 aaKnown RBP12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 SLC25A11Q02978 314 aaKnown RBP12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 SOX4Q06945 474 aaPredicted RBP12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 BBS12Q6ZW61 710 aa12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 SGF29Q96ES7 293 aa12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 SCYL1Q96KG9 808 aa12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 FBXO6Q9NRD1 293 aaPredicted RBP12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 ZFP69BQ9UJL9 534 aa12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 KNL1Q8NG31 2342 aa12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 IQANK1A0A1B0GTG1 560 aa12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 PMM2O15305 246 aa12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 BEST1O76090 585 aa12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 ITGBL1O95965 494 aaPredicted RBP12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 KLRC2P26717 231 aa12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 AVPR1AP37288 418 aa12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 ARL1P40616 181 aaPredicted RBP12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 DUSP28Q4G0W2 176 aa12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 USP50Q70EL3 339 aaPredicted RBP12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 POLNQ7Z5Q5 900 aa12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 FITM2Q8N6M3 262 aa12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 PLD5Q8N7P1 536 aa12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 PCDH18Q9HCL0 1135 aa12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 VTA1Q9NP79 307 aa12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 ITGA11Q9UKX5 1188 aa12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 UBQLN1Q9UMX0 589 aaKnown RBP12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 NUP205Q92621 2012 aa12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 SSC5DA1L4H1 1573 aa12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 KCNA4P22459 653 aa12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 MGAT1P26572 445 aa12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 GLRBP48167 497 aa12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 GPX6P59796 221 aa12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 SNX17Q15036 470 aa12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 SYPL2Q5VXT5 272 aa12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 FAM117BQ6P1L5 589 aa12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 EIF1ADQ8N9N8 165 aaKnown RBP12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 UPF1Q92900 1129 aaKnown RBP eCLIP12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 MOCOSQ96EN8 888 aa12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 CYP4F11Q9HBI6 524 aa12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 SPC25Q9HBM1 224 aa12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 ABI2Q9NYB9 513 aaPredicted RBP12.36□□□□□ -0.43
ATP1A3-208ENST00000545399 A0A1B0GUA9 196 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 C17orf102A2RUQ5 167 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 GLTPD2A6NH11 291 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 ARHGAP42A6NI28 874 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 EEF2KO00418 725 aaKnown RBP12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 METTL18O95568 372 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 BAG2O95816 211 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 PAEPP09466 180 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 ERVK-10P10266 1014 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 ELNP15502 786 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 PSEN2P49810 448 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 TPI1P60174 286 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 BOLA3Q53S33 107 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 CFAP157Q5JU67 520 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 C9orf57Q5W0N0 161 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 CDCA2Q69YH5 1023 aaPredicted RBP12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 TRABD2AQ86V40 505 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 NUDCD3Q8IVD9 361 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 FUKQ8N0W3 1084 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 C12orf50Q8NA57 414 aaPredicted RBP12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 EXT2Q93063 718 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 CCDC124Q96CT7 223 aaKnown RBP12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 TSSK1BQ9BXA7 367 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 TXLNGYQ9BZA5 131 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 GREB1LQ9C091 1923 aaPredicted RBP12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 LOC100653049A0A140TA62 436 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 CXorf49A8MYA2 514 aaPredicted RBP12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 XPOTO43592 962 aaKnown RBP12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 KRT34O76011 436 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 KRT37O76014 449 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 ENO1P06733 434 aaKnown RBP12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 NCF2P19878 526 aaPredicted RBP12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 RPL10AP62906 217 aaKnown RBP12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 CHI3L2Q15782 390 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 NXNQ6DKJ4 435 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 COLGALT1Q8NBJ5 622 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 ZNF317Q96PQ6 595 aaPredicted RBP12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 PTPN18Q99952 460 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 MYLK2Q9H1R3 596 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 HEY2Q9UBP5 337 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 IPPQ9Y573 584 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 LOC102724159A0A0B4J2E5 919 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 MYBPHLA2RUH7 354 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 C2CD4BA6NLJ0 364 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 LGR5O75473 907 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 PSMB4P28070 264 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 ZNF132P52740 706 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 SNX16P57768 344 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 PWP2Q15269 919 aaKnown RBP12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 FSCN1Q16658 493 aaKnown RBP12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 KLHL38Q2WGJ6 581 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 TAF1BQ53T94 588 aaPredicted RBP12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 EFHC2Q5JST6 749 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 MIB1Q86YT6 1006 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 CCDC125Q86Z20 511 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 SPATA6LQ8N4H0 392 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 CKAP2Q8WWK9 683 aa12.35□□□□□ -0.43
ATP1A3-208ENST00000545399 AZIN2Q96A70 460 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms