RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 NUMA1Q14980 2115 aa9.95□□□□□ -0.82
CHD4-212ENST00000545083 E9PAM4 449 aa9.95□□□□□ -0.82
CHD4-212ENST00000545083 J3QKU1 62 aa9.95□□□□□ -0.82
CHD4-212ENST00000545083 RTN3O95197 1032 aaPredicted RBP9.95□□□□□ -0.82
CHD4-212ENST00000545083 TBX18O95935 607 aa9.95□□□□□ -0.82
CHD4-212ENST00000545083 LDHAP00338 332 aaKnown RBP9.95□□□□□ -0.82
CHD4-212ENST00000545083 ZDHHC11BP0C7U3 371 aa9.95□□□□□ -0.82
CHD4-212ENST00000545083 PTPN1P18031 435 aaKnown RBP9.95□□□□□ -0.82
CHD4-212ENST00000545083 GARTP22102 1010 aa9.95□□□□□ -0.82
CHD4-212ENST00000545083 GNL1P36915 607 aaPredicted RBP9.95□□□□□ -0.82
CHD4-212ENST00000545083 UBA7P41226 1012 aa9.95□□□□□ -0.82
CHD4-212ENST00000545083 IL12RB1P42701 662 aa9.95□□□□□ -0.82
CHD4-212ENST00000545083 DGKGP49619 791 aa9.95□□□□□ -0.82
CHD4-212ENST00000545083 COPAP53621 1224 aa9.95□□□□□ -0.82
CHD4-212ENST00000545083 SEMG2Q02383 582 aa9.95□□□□□ -0.82
CHD4-212ENST00000545083 KCNT1Q5JUK3 1230 aa9.95□□□□□ -0.82
CHD4-212ENST00000545083 L1TD1Q5T7N2 865 aaKnown RBP9.95□□□□□ -0.82
CHD4-212ENST00000545083 MCTP1Q6DN14 999 aa9.95□□□□□ -0.82
CHD4-212ENST00000545083 TMPRSS6Q8IU80 811 aa9.95□□□□□ -0.82
CHD4-212ENST00000545083 OVCA2Q8WZ82 227 aa9.95□□□□□ -0.82
CHD4-212ENST00000545083 ANKRD36BP1Q96IX9 119 aa9.95□□□□□ -0.82
CHD4-212ENST00000545083 AK8Q96MA6 479 aa9.95□□□□□ -0.82
CHD4-212ENST00000545083 ACCSQ96QU6 501 aa9.95□□□□□ -0.82
CHD4-212ENST00000545083 XPO6Q96QU8 1125 aaKnown RBP9.95□□□□□ -0.82
CHD4-212ENST00000545083 KIF2CQ99661 725 aa9.95□□□□□ -0.82
CHD4-212ENST00000545083 ELOVL4Q9GZR5 314 aa9.95□□□□□ -0.82
CHD4-212ENST00000545083 PLK2Q9NYY3 685 aa9.95□□□□□ -0.82
CHD4-212ENST00000545083 COL6A6A6NMZ7 2263 aa9.95□□□□□ -0.82
CHD4-212ENST00000545083 FAM92AA1XBS5 289 aa9.94□□□□□ -0.82
CHD4-212ENST00000545083 H0Y8X5 98 aa9.94□□□□□ -0.82
CHD4-212ENST00000545083 PYCARD-AS1I3L0S3 204 aa9.94□□□□□ -0.82
CHD4-212ENST00000545083 CBX4O00257 560 aa9.94□□□□□ -0.82
CHD4-212ENST00000545083 TACC1O75410 805 aa9.94□□□□□ -0.82
CHD4-212ENST00000545083 CST3P01034 146 aaPredicted RBP9.94□□□□□ -0.82
CHD4-212ENST00000545083 IGLV3-19P01714 112 aa9.94□□□□□ -0.82
CHD4-212ENST00000545083 GRK6P43250 576 aa9.94□□□□□ -0.82
CHD4-212ENST00000545083 TUBP50607 506 aa9.94□□□□□ -0.82
CHD4-212ENST00000545083 SLC5A3P53794 718 aa9.94□□□□□ -0.82
CHD4-212ENST00000545083 IL9RQ01113 521 aa9.94□□□□□ -0.82
CHD4-212ENST00000545083 CFHR1Q03591 330 aa9.94□□□□□ -0.82
CHD4-212ENST00000545083 ENPP2Q13822 863 aa9.94□□□□□ -0.82
CHD4-212ENST00000545083 STARD3Q14849 445 aa9.94□□□□□ -0.82
CHD4-212ENST00000545083 SUZ12Q15022 739 aaKnown RBP9.94□□□□□ -0.82
CHD4-212ENST00000545083 PAQR9Q6ZVX9 377 aa9.94□□□□□ -0.82
CHD4-212ENST00000545083 FAM124AQ86V42 546 aa9.94□□□□□ -0.82
CHD4-212ENST00000545083 TMPRSS12Q86WS5 348 aa9.94□□□□□ -0.82
CHD4-212ENST00000545083 KRI1Q8N9T8 703 aaKnown RBP9.94□□□□□ -0.82
CHD4-212ENST00000545083 B3GALNT2Q8NCR0 500 aa9.94□□□□□ -0.82
CHD4-212ENST00000545083 OR6B3Q8NGW1 331 aa9.94□□□□□ -0.82
CHD4-212ENST00000545083 DNAJC19Q96DA6 116 aa9.94□□□□□ -0.82
CHD4-212ENST00000545083 NXPE2Q96DL1 559 aa9.94□□□□□ -0.82
CHD4-212ENST00000545083 SIPA1Q96FS4 1042 aa9.94□□□□□ -0.82
CHD4-212ENST00000545083 KLF16Q9BXK1 252 aaPredicted RBP9.94□□□□□ -0.82
CHD4-212ENST00000545083 SNX25Q9H3E2 840 aa9.94□□□□□ -0.82
CHD4-212ENST00000545083 C6orf106Q9H6K1 298 aaPredicted RBP9.94□□□□□ -0.82
CHD4-212ENST00000545083 MRPL44Q9H9J2 332 aaKnown RBP9.94□□□□□ -0.82
CHD4-212ENST00000545083 WDR35Q9P2L0 1181 aa9.94□□□□□ -0.82
CHD4-212ENST00000545083 THAP10Q9P2Z0 257 aaPredicted RBP9.94□□□□□ -0.82
CHD4-212ENST00000545083 FBXO10Q9UK96 956 aa9.94□□□□□ -0.82
CHD4-212ENST00000545083 EXOC7Q9UPT5 735 aa9.94□□□□□ -0.82
CHD4-212ENST00000545083 ANKRD6Q9Y2G4 727 aa9.94□□□□□ -0.82
CHD4-212ENST00000545083 PTPN13Q12923 2485 aa9.93□□□□□ -0.82
CHD4-212ENST00000545083 PCDHGA12O60330 932 aa9.93□□□□□ -0.82
CHD4-212ENST00000545083 TLR5O60602 858 aa9.93□□□□□ -0.82
CHD4-212ENST00000545083 GCNT3O95395 438 aa9.93□□□□□ -0.82
CHD4-212ENST00000545083 ACO1P21399 889 aaKnown RBP9.93□□□□□ -0.82
CHD4-212ENST00000545083 OXTRP30559 389 aa9.93□□□□□ -0.82
CHD4-212ENST00000545083 ACSL1P33121 698 aa9.93□□□□□ -0.82
CHD4-212ENST00000545083 AFF3P51826 1226 aaKnown RBP9.93□□□□□ -0.82
CHD4-212ENST00000545083 SF3A1Q15459 793 aaKnown RBP9.93□□□□□ -0.82
CHD4-212ENST00000545083 GEN1Q17RS7 908 aa9.93□□□□□ -0.82
CHD4-212ENST00000545083 DUOXA2Q1HG44 320 aa9.93□□□□□ -0.82
CHD4-212ENST00000545083 LRRC69Q6ZNQ3 347 aa9.93□□□□□ -0.82
CHD4-212ENST00000545083 USP49Q70CQ1 688 aa9.93□□□□□ -0.82
CHD4-212ENST00000545083 TRAPPC11Q7Z392 1133 aa9.93□□□□□ -0.82
CHD4-212ENST00000545083 GPR155Q7Z3F1 870 aa9.93□□□□□ -0.82
CHD4-212ENST00000545083 FAM35AQ86V20 835 aa9.93□□□□□ -0.82
CHD4-212ENST00000545083 CBWD2Q8IUF1 395 aa9.93□□□□□ -0.82
CHD4-212ENST00000545083 GPD1LQ8N335 351 aa9.93□□□□□ -0.82
CHD4-212ENST00000545083 RASSF8Q8NHQ8 419 aa9.93□□□□□ -0.82
CHD4-212ENST00000545083 SNX19Q92543 992 aa9.93□□□□□ -0.82
CHD4-212ENST00000545083 NUP58Q9BVL2 599 aa9.93□□□□□ -0.82
CHD4-212ENST00000545083 NACA2Q9H009 215 aa9.93□□□□□ -0.82
CHD4-212ENST00000545083 TM9SF3Q9HD45 589 aa9.93□□□□□ -0.82
CHD4-212ENST00000545083 DNMT3LQ9UJW3 386 aa9.93□□□□□ -0.82
CHD4-212ENST00000545083 R3HCC1Q9Y3T6 440 aaKnown RBP9.93□□□□□ -0.82
CHD4-212ENST00000545083 TMEM131Q92545 1883 aa9.93□□□□□ -0.82
CHD4-212ENST00000545083 TEX51A0A1B0GUA7 166 aa9.92□□□□□ -0.82
CHD4-212ENST00000545083 A8MXQ7 604 aa9.92□□□□□ -0.82
CHD4-212ENST00000545083 CAPN9O14815 690 aa9.92□□□□□ -0.82
CHD4-212ENST00000545083 MDM4O15151 490 aa9.92□□□□□ -0.82
CHD4-212ENST00000545083 PRPF6O94906 941 aaKnown RBP9.92□□□□□ -0.82
CHD4-212ENST00000545083 TNNC2P02585 160 aa9.92□□□□□ -0.82
CHD4-212ENST00000545083 JUPP14923 745 aa9.92□□□□□ -0.82
CHD4-212ENST00000545083 PRKCHP24723 683 aa9.92□□□□□ -0.82
CHD4-212ENST00000545083 GRIA4P48058 902 aa9.92□□□□□ -0.82
CHD4-212ENST00000545083 CCT8P50990 548 aa9.92□□□□□ -0.82
CHD4-212ENST00000545083 MFAP3P55082 362 aa9.92□□□□□ -0.82
CHD4-212ENST00000545083 TARDBPQ13148 414 aaKnown RBP eCLIP9.92□□□□□ -0.82
CHD4-212ENST00000545083 DNAJC3Q13217 504 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms