RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 TNFRSF4P43489 277 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 SNX16P57768 344 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 BPIFB4P59827 614 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 SATB1Q01826 763 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 ADIGQ0VDE8 80 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 GAS6Q14393 721 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 E2F5Q15329 346 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 VWA3BQ502W6 1294 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 LY6G5CQ5SRR4 150 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 CCDC183Q5T5S1 534 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 Q6ZS52 159 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 TRMT11Q7Z4G4 463 aaKnown RBP12.38□□□□□ -0.43
HDAC4-216ENST00000544989 LONP2Q86WA8 852 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 BBS7Q8IWZ6 715 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 ANKRD20A12PQ8NF67 263 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 UBA3Q8TBC4 463 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 GPT2Q8TD30 523 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 KCNV2Q8TDN2 545 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 STK32AQ8WU08 396 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 TFAP2BQ92481 460 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 KAT5Q92993 513 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 PLD4Q96BZ4 506 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 KREMEN1Q96MU8 473 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 CRACR2AQ9BSW2 395 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 ULBP1Q9BZM6 244 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 EPC1Q9H2F5 836 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 MARK1Q9P0L2 795 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 MARCH2Q9P0N8 246 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 DEC1Q9P2X7 70 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 RASAL2Q9UJF2 1139 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 RAB23Q9ULC3 237 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 FANCMQ8IYD8 2048 aa12.38□□□□□ -0.43
HDAC4-216ENST00000544989 CHD8Q9HCK8 2581 aa12.37□□□□□ -0.43
HDAC4-216ENST00000544989 KCNJ18B7U540 433 aa12.37□□□□□ -0.43
HDAC4-216ENST00000544989 RNF225M0QZC1 329 aaPredicted RBP12.37□□□□□ -0.43
HDAC4-216ENST00000544989 KAT7O95251 611 aa12.37□□□□□ -0.43
HDAC4-216ENST00000544989 BRD2P25440 801 aaKnown RBP12.37□□□□□ -0.43
HDAC4-216ENST00000544989 GNA15P30679 374 aa12.37□□□□□ -0.43
HDAC4-216ENST00000544989 HARS2P49590 506 aaKnown RBP12.37□□□□□ -0.43
HDAC4-216ENST00000544989 PGFP49763 221 aa12.37□□□□□ -0.43
HDAC4-216ENST00000544989 ZNF445P59923 1031 aa12.37□□□□□ -0.43
HDAC4-216ENST00000544989 MRPS21P82921 87 aaKnown RBP12.37□□□□□ -0.43
HDAC4-216ENST00000544989 PTK2Q05397 1052 aa12.37□□□□□ -0.43
HDAC4-216ENST00000544989 EFEMP1Q12805 493 aa12.37□□□□□ -0.43
HDAC4-216ENST00000544989 KCNJ12Q14500 433 aa12.37□□□□□ -0.43
HDAC4-216ENST00000544989 STX1AQ16623 288 aa12.37□□□□□ -0.43
HDAC4-216ENST00000544989 ANO4Q32M45 955 aa12.37□□□□□ -0.43
HDAC4-216ENST00000544989 TCP11X2Q5H9J9 407 aa12.37□□□□□ -0.43
HDAC4-216ENST00000544989 Q6ZNB5 142 aa12.37□□□□□ -0.43
HDAC4-216ENST00000544989 SYT13Q7L8C5 426 aa12.37□□□□□ -0.43
HDAC4-216ENST00000544989 MIB1Q86YT6 1006 aa12.37□□□□□ -0.43
HDAC4-216ENST00000544989 NOX5Q96PH1 765 aa12.37□□□□□ -0.43
HDAC4-216ENST00000544989 ARHGEF4Q9NR80 690 aa12.37□□□□□ -0.43
HDAC4-216ENST00000544989 HBS1LQ9Y450 684 aaKnown RBP12.37□□□□□ -0.43
HDAC4-216ENST00000544989 NFE2L3Q9Y4A8 694 aa12.37□□□□□ -0.43
HDAC4-216ENST00000544989 DAAM1Q9Y4D1 1078 aa12.37□□□□□ -0.43
HDAC4-216ENST00000544989 SPTBN2O15020 2390 aa12.37□□□□□ -0.43
HDAC4-216ENST00000544989 K7ESF4 209 aa12.36□□□□□ -0.43
HDAC4-216ENST00000544989 TULP2O00295 520 aa12.36□□□□□ -0.43
HDAC4-216ENST00000544989 PES1O00541 588 aaKnown RBP12.36□□□□□ -0.43
HDAC4-216ENST00000544989 THAP12O43422 761 aa12.36□□□□□ -0.43
HDAC4-216ENST00000544989 GREM1O60565 184 aa12.36□□□□□ -0.43
HDAC4-216ENST00000544989 STC2O76061 302 aa12.36□□□□□ -0.43
HDAC4-216ENST00000544989 LETM1O95202 739 aaPredicted RBP12.36□□□□□ -0.43
HDAC4-216ENST00000544989 LATS1O95835 1130 aa12.36□□□□□ -0.43
HDAC4-216ENST00000544989 CYBBP04839 570 aa12.36□□□□□ -0.43
HDAC4-216ENST00000544989 LCP1P13796 627 aa12.36□□□□□ -0.43
HDAC4-216ENST00000544989 SLC9A1P19634 815 aa12.36□□□□□ -0.43
HDAC4-216ENST00000544989 RPL34P49207 117 aaKnown RBP12.36□□□□□ -0.43
HDAC4-216ENST00000544989 DAOAP59103 153 aa12.36□□□□□ -0.43
HDAC4-216ENST00000544989 GAB4Q2WGN9 574 aa12.36□□□□□ -0.43
HDAC4-216ENST00000544989 BSPRYQ5W0U4 402 aa12.36□□□□□ -0.43
HDAC4-216ENST00000544989 PMF1Q6P1K2 205 aa12.36□□□□□ -0.43
HDAC4-216ENST00000544989 TSSK4Q6SA08 328 aa12.36□□□□□ -0.43
HDAC4-216ENST00000544989 BEND5Q7L4P6 421 aa12.36□□□□□ -0.43
HDAC4-216ENST00000544989 WDR5BQ86VZ2 330 aa12.36□□□□□ -0.43
HDAC4-216ENST00000544989 GPR161Q8N6U8 529 aaKnown RBP12.36□□□□□ -0.43
HDAC4-216ENST00000544989 RPLP0P6Q8NHW5 317 aa12.36□□□□□ -0.43
HDAC4-216ENST00000544989 ZNF606Q8WXB4 792 aa12.36□□□□□ -0.43
HDAC4-216ENST00000544989 SHC3Q92529 594 aa12.36□□□□□ -0.43
HDAC4-216ENST00000544989 RUBCNQ92622 972 aa12.36□□□□□ -0.43
HDAC4-216ENST00000544989 BBS2Q9BXC9 721 aa12.36□□□□□ -0.43
HDAC4-216ENST00000544989 IRX2Q9BZI1 471 aaPredicted RBP12.36□□□□□ -0.43
HDAC4-216ENST00000544989 NAT10Q9H0A0 1025 aaKnown RBP12.36□□□□□ -0.43
HDAC4-216ENST00000544989 CEP83Q9Y592 693 aa12.36□□□□□ -0.43
HDAC4-216ENST00000544989 CACNA1GO43497 2377 aa12.35□□□□□ -0.43
HDAC4-216ENST00000544989 SLC12A8A0AV02 714 aa12.35□□□□□ -0.43
HDAC4-216ENST00000544989 TBC1D3BA6NDS4 549 aa12.35□□□□□ -0.43
HDAC4-216ENST00000544989 MDM4O15151 490 aa12.35□□□□□ -0.43
HDAC4-216ENST00000544989 CACNG3O60359 315 aa12.35□□□□□ -0.43
HDAC4-216ENST00000544989 APBB3O95704 486 aa12.35□□□□□ -0.43
HDAC4-216ENST00000544989 LTFP02788 710 aa12.35□□□□□ -0.43
HDAC4-216ENST00000544989 CORO1AP31146 461 aaKnown RBP12.35□□□□□ -0.43
HDAC4-216ENST00000544989 USP8P40818 1118 aa12.35□□□□□ -0.43
HDAC4-216ENST00000544989 GPD2P43304 727 aa12.35□□□□□ -0.43
HDAC4-216ENST00000544989 ID4P47928 161 aa12.35□□□□□ -0.43
HDAC4-216ENST00000544989 ARHGAP44Q17R89 818 aa12.35□□□□□ -0.43
HDAC4-216ENST00000544989 MIIPQ5JXC2 388 aa12.35□□□□□ -0.43
HDAC4-216ENST00000544989 GRAMD4Q6IC98 578 aa12.35□□□□□ -0.43
HDAC4-216ENST00000544989 MSANTD2Q6P1R3 559 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms