RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 SPATA2LQ8IUW3 424 aaPredicted RBP7.32□□□□□ -1.24
HMGCS2-204ENST00000544913 ZDHHC14Q8IZN3 488 aa7.32□□□□□ -1.24
HMGCS2-204ENST00000544913 ARFGAP2Q8N6H7 521 aa7.32□□□□□ -1.24
HMGCS2-204ENST00000544913 GPR152Q8TDT2 470 aa7.32□□□□□ -1.24
HMGCS2-204ENST00000544913 RXFP2Q8WXD0 754 aa7.32□□□□□ -1.24
HMGCS2-204ENST00000544913 IFT81Q8WYA0 676 aa7.32□□□□□ -1.24
HMGCS2-204ENST00000544913 HERPUD2Q9BSE4 406 aa7.32□□□□□ -1.24
HMGCS2-204ENST00000544913 NMUR1Q9HB89 426 aa7.32□□□□□ -1.24
HMGCS2-204ENST00000544913 MRPL47Q9HD33 250 aaKnown RBP7.32□□□□□ -1.24
HMGCS2-204ENST00000544913 ALG13Q9NP73 1137 aaKnown RBP7.32□□□□□ -1.24
HMGCS2-204ENST00000544913 CNGB3Q9NQW8 809 aa7.32□□□□□ -1.24
HMGCS2-204ENST00000544913 ASNSD1Q9NWL6 643 aa7.32□□□□□ -1.24
HMGCS2-204ENST00000544913 SMARCAL1Q9NZC9 954 aa7.32□□□□□ -1.24
HMGCS2-204ENST00000544913 EHD2Q9NZN4 543 aa7.32□□□□□ -1.24
HMGCS2-204ENST00000544913 FNIP2Q9P278 1114 aa7.32□□□□□ -1.24
HMGCS2-204ENST00000544913 AFF4Q9UHB7 1163 aaKnown RBP7.32□□□□□ -1.24
HMGCS2-204ENST00000544913 FEZ2Q9UHY8 353 aaPredicted RBP7.32□□□□□ -1.24
HMGCS2-204ENST00000544913 NFU1Q9UMS0 254 aa7.32□□□□□ -1.24
HMGCS2-204ENST00000544913 PCDHB12Q9Y5F1 795 aa7.32□□□□□ -1.24
HMGCS2-204ENST00000544913 MYO16Q9Y6X6 1858 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 C2orf71A6NGG8 1288 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 TMEM110-MUSTN1A8MSY1 372 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 HMGB1P1B2RPK0 211 aaPredicted RBP7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 DAB1O75553 588 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 SLC34A2O95436 690 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 ZBED1O96006 694 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 FGGP02679 453 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 URODP06132 367 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 USP17L7P0C7H9 530 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 ZDHHC11BP0C7U3 371 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 CPB1P15086 417 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 ATF2P15336 505 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 HMGA1P17096 107 aaKnown RBP7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 CTNNA2P26232 953 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 PTPN9P43378 593 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 CARSP49589 748 aaKnown RBP7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 EIF3BP55884 814 aaKnown RBP7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 ARPP19P56211 112 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 HDAC4P56524 1084 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 SMARCB1Q12824 385 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 HLTFQ14527 1009 aaKnown RBP eCLIP7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 ZSCAN26Q16670 478 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 SEL1L2Q5TEA6 688 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 AADACL2Q6P093 401 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 KLHL7Q8IXQ5 586 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 ZNF461Q8TAF7 563 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 SPPL2BQ8TCT7 592 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 C2orf15Q8WU43 125 aaKnown RBP7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 CASKIN2Q8WXE0 1202 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 SPATA17Q96L03 361 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 CFAP57Q96MR6 1250 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 NPY6RQ99463 290 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 DDX23Q9BUQ8 820 aaKnown RBP7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 TTLL2Q9BWV7 592 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 UBE2OQ9C0C9 1292 aaKnown RBP7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 MTIF3Q9H2K0 278 aaKnown RBP7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 SYNCQ9H7C4 482 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 AAASQ9NRG9 546 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 HOMER3Q9NSC5 361 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 DOCK6Q96HP0 2047 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 C3orf70A6NLC5 250 aaPredicted RBP7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 SRRM3A6NNA2 597 aaPredicted RBP7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 MYO1FO00160 1098 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 ENDOD1O94919 500 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 FBXO21O94952 628 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 IGLV3-25P01717 112 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 BMP8BP34820 402 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 DNA2P51530 1060 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 ATXN1P54253 815 aaKnown RBP7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 SKOR1P84550 965 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 ATP13A4Q4VNC1 1196 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 TPGS2Q68CL5 300 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 TCEAL8Q8IYN2 117 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 MRPL43Q8N983 215 aaKnown RBP7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 POF1BQ8WVV4 589 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 KLHL5Q96PQ7 755 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 CNPY3Q9BT09 278 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 DNAI2Q9GZS0 605 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 FAM107BQ9H098 131 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 TSPYL1Q9H0U9 437 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 LRRC4Q9HBW1 653 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 ANLNQ9NQW6 1124 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 MRPL17Q9NRX2 175 aaKnown RBP7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 HSFX1Q9UBD0 423 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 PCYOX1Q9UHG3 505 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 IP6K2Q9UHH9 426 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 FBXW11Q9UKB1 542 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 SCML2Q9UQR0 700 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 YIPF1Q9Y548 306 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 PCDHA3Q9Y5H8 950 aa7.31□□□□□ -1.24
HMGCS2-204ENST00000544913 EYSQ5T1H1 3165 aa7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 TRIM66O15016 1216 aa7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 TGM5O43548 720 aa7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 LPXNO60711 386 aa7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 SHOX2O60902 331 aaPredicted RBP7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 RB1P06400 928 aa7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 PDGFRAP16234 1089 aa7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 GPD1P21695 349 aa7.3□□□□□ -1.24
HMGCS2-204ENST00000544913 PSMA2P25787 234 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms