RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 FNBP1Q96RU3 617 aa4.44□□□□□ -1.7
SNHG1-220ENST00000544550 LXNQ9BS40 222 aa4.44□□□□□ -1.7
SNHG1-220ENST00000544550 KRTAP17-1Q9BYP8 105 aa4.44□□□□□ -1.7
SNHG1-220ENST00000544550 C2orf40Q9H1Z8 148 aa4.44□□□□□ -1.7
SNHG1-220ENST00000544550 SLKQ9H2G2 1235 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-220ENST00000544550 PDZD7Q9H5P4 517 aa4.44□□□□□ -1.7
SNHG1-220ENST00000544550 ZSWIM4Q9H7M6 989 aa4.44□□□□□ -1.7
SNHG1-220ENST00000544550 HPS4Q9NQG7 708 aa4.44□□□□□ -1.7
SNHG1-220ENST00000544550 TOPORSQ9NS56 1045 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-220ENST00000544550 POLR3BQ9NW08 1133 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-220ENST00000544550 ACTR10Q9NZ32 417 aa4.44□□□□□ -1.7
SNHG1-220ENST00000544550 BCCIPQ9P287 314 aaKnown RBP eCLIP4.44□□□□□ -1.7
SNHG1-220ENST00000544550 HSFX1Q9UBD0 423 aa4.44□□□□□ -1.7
SNHG1-220ENST00000544550 KLHL3Q9UH77 587 aa4.44□□□□□ -1.7
SNHG1-220ENST00000544550 PCOLCE2Q9UKZ9 415 aa4.44□□□□□ -1.7
SNHG1-220ENST00000544550 MMP17Q9ULZ9 603 aa4.44□□□□□ -1.7
SNHG1-220ENST00000544550 TBX20Q9UMR3 447 aa4.44□□□□□ -1.7
SNHG1-220ENST00000544550 R3HCC1Q9Y3T6 440 aaKnown RBP4.44□□□□□ -1.7
SNHG1-220ENST00000544550 TICRRQ7Z2Z1 1910 aa4.44□□□□□ -1.7
SNHG1-220ENST00000544550 MTCL1Q9Y4B5 1905 aaKnown RBP4.44□□□□□ -1.7
SNHG1-220ENST00000544550 SETXQ7Z333 2677 aaKnown RBP4.44□□□□□ -1.7
SNHG1-220ENST00000544550 ATXN2Q99700 1313 aaKnown RBP4.44□□□□□ -1.7
SNHG1-220ENST00000544550 ZZEF1O43149 2961 aa4.44□□□□□ -1.7
SNHG1-220ENST00000544550 LRRIQ4A6NIV6 560 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 OR6C75A6NL08 312 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 GOLGA8AA7E2F4 631 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 GOLGA8BA8MQT2 603 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 B8ZZF3 427 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 I3L4J1 428 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 DYRK3O43781 588 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 CBFA2T3O75081 653 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 GJB3O75712 270 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 CST3P01034 146 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-220ENST00000544550 ZNF883P0CG24 379 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 GLRA2P23416 452 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 IL12RB1P42701 662 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 TUFMP49411 452 aaKnown RBP4.43□□□□□ -1.7
SNHG1-220ENST00000544550 CSRP3P50461 194 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 PTH1RQ03431 593 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 YWHAHQ04917 246 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-220ENST00000544550 ZNF33AQ06730 810 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 DUSP4Q13115 394 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 GPR17Q13304 367 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 PRPF4BQ13523 1007 aaKnown RBP4.43□□□□□ -1.7
SNHG1-220ENST00000544550 ZNF268Q14587 947 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-220ENST00000544550 EPHA7Q15375 998 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 TAF12Q16514 161 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 PLEKHG6Q3KR16 790 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 PREPLQ4J6C6 727 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-220ENST00000544550 GLRA4Q5JXX5 417 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 EOGTQ5NDL2 527 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 SYCP2LQ5T4T6 812 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 CDCA2Q69YH5 1023 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-220ENST00000544550 TRIM68Q6AZZ1 485 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 CDPF1Q6NVV7 123 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 IL27RAQ6UWB1 636 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 CD300LGQ6UXG3 332 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 UNC5AQ6ZN44 842 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 GAREM2Q75VX8 874 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 DNAJB7Q7Z6W7 309 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-220ENST00000544550 USP37Q86T82 979 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 NOP9Q86U38 636 aaKnown RBP4.43□□□□□ -1.7
SNHG1-220ENST00000544550 CHD1LQ86WJ1 897 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 CMTM8Q8IZV2 173 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 CELF2-AS1Q8N7Q2 184 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 FAM181AQ8N9Y4 354 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 ETNPPLQ8TBG4 499 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 TBCKQ8TEA7 893 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 USP33Q8TEY7 942 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 SETD7Q8WTS6 366 aaKnown RBP4.43□□□□□ -1.7
SNHG1-220ENST00000544550 OSCP1Q8WVF1 389 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 GJA10Q969M2 543 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 CHFRQ96EP1 664 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 MEGF10Q96KG7 1140 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 POLR3CQ9BUI4 534 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-220ENST00000544550 TRIM55Q9BYV6 548 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 POLR3FQ9H1D9 316 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-220ENST00000544550 IL25Q9H293 177 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 FZD8Q9H461 694 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 PIF1Q9H611 641 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 ECT2Q9H8V3 914 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 XPNPEP1Q9NQW7 623 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 ANKEF1Q9NU02 776 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 TDP1Q9NUW8 608 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 DDX25Q9UHL0 483 aaKnown RBP4.43□□□□□ -1.7
SNHG1-220ENST00000544550 GDAQ9Y2T3 454 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 TAF6LQ9Y6J9 622 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 ZFYVE26Q68DK2 2539 aa4.43□□□□□ -1.7
SNHG1-220ENST00000544550 GCN1Q92616 2671 aaKnown RBP4.42□□□□□ -1.7
SNHG1-220ENST00000544550 SMIM28A0A1B0GU29 152 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 OTOL1A6NHN0 477 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-220ENST00000544550 ACKR2O00590 384 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 RGS13O14921 159 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 SGSM2O43147 1006 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 FLRT2O43155 660 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 PRPF3O43395 683 aaKnown RBP4.42□□□□□ -1.7
SNHG1-220ENST00000544550 SLC28A2O43868 658 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 ZNF217O75362 1048 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 OAZ2O95190 189 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 TDP2O95551 362 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms