RNA–Protein interactions for RNA: ENST00000544547.5

LIMS1-215, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS1, Length 4,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-215ENST00000544547 GPATCH2LQ9NWQ4 482 aa14.68□□□□□ -0.06
LIMS1-215ENST00000544547 F8W8V4 182 aa14.68□□□□□ -0.06
LIMS1-215ENST00000544547 M0R3G1 203 aa14.68□□□□□ -0.06
LIMS1-215ENST00000544547 CHRNB2P17787 502 aa14.68□□□□□ -0.06
LIMS1-215ENST00000544547 ETFBP38117 255 aa14.68□□□□□ -0.06
LIMS1-215ENST00000544547 SLC10A4Q96EP9 437 aa14.68□□□□□ -0.06
LIMS1-215ENST00000544547 CDYLQ9Y232 598 aa14.68□□□□□ -0.06
LIMS1-215ENST00000544547 SERPINB1P30740 379 aa14.68□□□□□ -0.06
LIMS1-215ENST00000544547 NEK2P51955 445 aa14.68□□□□□ -0.06
LIMS1-215ENST00000544547 ARPP19P56211 112 aa14.68□□□□□ -0.06
LIMS1-215ENST00000544547 RPL7AP62424 266 aaKnown RBP14.68□□□□□ -0.06
LIMS1-215ENST00000544547 WDR72Q3MJ13 1102 aa14.68□□□□□ -0.06
LIMS1-215ENST00000544547 TRIM15Q9C019 465 aa14.68□□□□□ -0.06
LIMS1-215ENST00000544547 ACSS3Q9H6R3 686 aa14.68□□□□□ -0.06
LIMS1-215ENST00000544547 ZNF395Q9H8N7 513 aaPredicted RBP14.68□□□□□ -0.06
LIMS1-215ENST00000544547 BFARQ9NZS9 450 aa14.68□□□□□ -0.06
LIMS1-215ENST00000544547 CPSF3Q9UKF6 684 aaKnown RBP14.68□□□□□ -0.06
LIMS1-215ENST00000544547 DEAF1O75398 565 aaPredicted RBP14.68□□□□□ -0.06
LIMS1-215ENST00000544547 SPATA31C1P0DKV0 1188 aa14.68□□□□□ -0.06
LIMS1-215ENST00000544547 ADCK1Q86TW2 530 aa14.68□□□□□ -0.06
LIMS1-215ENST00000544547 CLEC4FQ8N1N0 589 aa14.68□□□□□ -0.06
LIMS1-215ENST00000544547 OR6B3Q8NGW1 331 aa14.68□□□□□ -0.06
LIMS1-215ENST00000544547 MARK4Q96L34 752 aa14.68□□□□□ -0.06
LIMS1-215ENST00000544547 CRAMP1Q96RY5 1269 aa14.68□□□□□ -0.06
LIMS1-215ENST00000544547 POLR3FQ9H1D9 316 aaPredicted RBP14.68□□□□□ -0.06
LIMS1-215ENST00000544547 PTTG2Q9NZH5 202 aa14.68□□□□□ -0.06
LIMS1-215ENST00000544547 BAG5Q9UL15 447 aa14.68□□□□□ -0.06
LIMS1-215ENST00000544547 DMTF1Q9Y222 760 aa14.68□□□□□ -0.06
LIMS1-215ENST00000544547 ARFGEF2Q9Y6D5 1785 aa14.68□□□□□ -0.06
LIMS1-215ENST00000544547 KCPQ6ZWJ8 1503 aa14.67□□□□□ -0.06
LIMS1-215ENST00000544547 TRIM43BA6NCK2 446 aa14.67□□□□□ -0.06
LIMS1-215ENST00000544547 MAGEC1O60732 1142 aa14.67□□□□□ -0.06
LIMS1-215ENST00000544547 KRT8P05787 483 aa14.67□□□□□ -0.06
LIMS1-215ENST00000544547 CHRNA5P30532 468 aa14.67□□□□□ -0.06
LIMS1-215ENST00000544547 NME5P56597 212 aa14.67□□□□□ -0.06
LIMS1-215ENST00000544547 NADK2Q4G0N4 442 aa14.67□□□□□ -0.06
LIMS1-215ENST00000544547 PQLC1Q8N2U9 271 aa14.67□□□□□ -0.06
LIMS1-215ENST00000544547 PCDH20Q8N6Y1 951 aaKnown RBP14.67□□□□□ -0.06
LIMS1-215ENST00000544547 ATP6V1E2Q96A05 226 aa14.67□□□□□ -0.06
LIMS1-215ENST00000544547 PLEKHG4BQ96PX9 1271 aa14.67□□□□□ -0.06
LIMS1-215ENST00000544547 MIPEPQ99797 713 aa14.67□□□□□ -0.06
LIMS1-215ENST00000544547 RNF146Q9NTX7 359 aa14.67□□□□□ -0.06
LIMS1-215ENST00000544547 TRNAU1APQ9NX07 287 aaKnown RBP14.67□□□□□ -0.06
LIMS1-215ENST00000544547 TBX20Q9UMR3 447 aa14.67□□□□□ -0.06
LIMS1-215ENST00000544547 GLRA3O75311 464 aa14.67□□□□□ -0.06
LIMS1-215ENST00000544547 LDHAP00338 332 aaKnown RBP14.67□□□□□ -0.06
LIMS1-215ENST00000544547 CPA3P15088 417 aa14.67□□□□□ -0.06
LIMS1-215ENST00000544547 STIP1P31948 543 aaKnown RBP14.67□□□□□ -0.06
LIMS1-215ENST00000544547 RPL22P35268 128 aaKnown RBP14.67□□□□□ -0.06
LIMS1-215ENST00000544547 CUL2Q13617 745 aa14.67□□□□□ -0.06
LIMS1-215ENST00000544547 ARMCX2Q7L311 632 aa14.67□□□□□ -0.06
LIMS1-215ENST00000544547 FAM71AQ8IYT1 594 aa14.67□□□□□ -0.06
LIMS1-215ENST00000544547 TMEM143Q96AN5 459 aa14.67□□□□□ -0.06
LIMS1-215ENST00000544547 MRPS26Q9BYN8 205 aaKnown RBP14.67□□□□□ -0.06
LIMS1-215ENST00000544547 BRD8Q9H0E9 1235 aa14.67□□□□□ -0.06
LIMS1-215ENST00000544547 RNPEPQ9H4A4 650 aa14.67□□□□□ -0.06
LIMS1-215ENST00000544547 SLC39A10Q9ULF5 831 aa14.67□□□□□ -0.06
LIMS1-215ENST00000544547 GNEQ9Y223 722 aaKnown RBP14.67□□□□□ -0.06
LIMS1-215ENST00000544547 C5P01031 1676 aa14.67□□□□□ -0.06
LIMS1-215ENST00000544547 RARBP10826 455 aa14.67□□□□□ -0.06
LIMS1-215ENST00000544547 IMPDH2P12268 514 aa14.67□□□□□ -0.06
LIMS1-215ENST00000544547 CCDC130P13994 396 aa14.67□□□□□ -0.06
LIMS1-215ENST00000544547 ABCG1P45844 678 aa14.67□□□□□ -0.06
LIMS1-215ENST00000544547 SNRNP48Q6IEG0 339 aaKnown RBP14.67□□□□□ -0.06
LIMS1-215ENST00000544547 ZNF677Q86XU0 584 aa14.67□□□□□ -0.06
LIMS1-215ENST00000544547 COL1A1P02452 1464 aaPredicted RBP14.67□□□□□ -0.06
LIMS1-215ENST00000544547 GSTA4O15217 222 aa14.66□□□□□ -0.06
LIMS1-215ENST00000544547 RNASEH1O60930 286 aaKnown RBP14.66□□□□□ -0.06
LIMS1-215ENST00000544547 ASLP04424 464 aa14.66□□□□□ -0.06
LIMS1-215ENST00000544547 CCDC166P0CW27 439 aa14.66□□□□□ -0.06
LIMS1-215ENST00000544547 ME2P23368 584 aa14.66□□□□□ -0.06
LIMS1-215ENST00000544547 JAK3P52333 1124 aa14.66□□□□□ -0.06
LIMS1-215ENST00000544547 AAGABQ6PD74 315 aa14.66□□□□□ -0.06
LIMS1-215ENST00000544547 OTOP1Q7RTM1 612 aa14.66□□□□□ -0.06
LIMS1-215ENST00000544547 CROCCP3Q8IVE0 287 aa14.66□□□□□ -0.06
LIMS1-215ENST00000544547 TBC1D22BQ9NU19 505 aa14.66□□□□□ -0.06
LIMS1-215ENST00000544547 TCRBV9S1A1TA0A576 114 aa14.66□□□□□ -0.06
LIMS1-215ENST00000544547 BCL10O95999 233 aa14.66□□□□□ -0.06
LIMS1-215ENST00000544547 ACTR3P61158 418 aa14.66□□□□□ -0.06
LIMS1-215ENST00000544547 STXBP2Q15833 593 aa14.66□□□□□ -0.06
LIMS1-215ENST00000544547 GPR107Q5VW38 600 aa14.66□□□□□ -0.06
LIMS1-215ENST00000544547 CES3Q6UWW8 571 aa14.66□□□□□ -0.06
LIMS1-215ENST00000544547 SEMA4DQ92854 862 aa14.66□□□□□ -0.06
LIMS1-215ENST00000544547 RSAD1Q9HA92 442 aa14.66□□□□□ -0.06
LIMS1-215ENST00000544547 LNPEPQ9UIQ6 1025 aa14.66□□□□□ -0.06
LIMS1-215ENST00000544547 ORC6Q9Y5N6 252 aa14.66□□□□□ -0.06
LIMS1-215ENST00000544547 A0A0B4J269 797 aa14.66□□□□□ -0.06
LIMS1-215ENST00000544547 MYOCOSA0A1B0GUC4 107 aa14.66□□□□□ -0.06
LIMS1-215ENST00000544547 MYCP01106 439 aaPredicted RBP14.66□□□□□ -0.06
LIMS1-215ENST00000544547 SERPINA6P08185 405 aa14.66□□□□□ -0.06
LIMS1-215ENST00000544547 POU5F1Q01860 360 aaKnown RBP14.66□□□□□ -0.06
LIMS1-215ENST00000544547 TAP1Q03518 808 aa14.66□□□□□ -0.06
LIMS1-215ENST00000544547 USP10Q14694 798 aaKnown RBP14.66□□□□□ -0.06
LIMS1-215ENST00000544547 ZBTB41Q5SVQ8 909 aa14.66□□□□□ -0.06
LIMS1-215ENST00000544547 KBTBD2Q8IY47 623 aa14.66□□□□□ -0.06
LIMS1-215ENST00000544547 FBXW8Q8N3Y1 598 aa14.66□□□□□ -0.06
LIMS1-215ENST00000544547 CERS5Q8N5B7 392 aa14.66□□□□□ -0.06
LIMS1-215ENST00000544547 ALLCQ8N6M5 410 aa14.66□□□□□ -0.06
LIMS1-215ENST00000544547 PRR11Q96HE9 360 aaPredicted RBP14.66□□□□□ -0.06
LIMS1-215ENST00000544547 PIM2Q9P1W9 311 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms