RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 LSAMPQ13449 338 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 PTGISQ16647 500 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 APTXQ7Z2E3 356 aaKnown RBP9.18□□□□□ -0.94
VPS13D-212ENST00000543766 CDR2LQ86X02 465 aaPredicted RBP9.18□□□□□ -0.94
VPS13D-212ENST00000543766 NUTM2AQ8IVF1 878 aaPredicted RBP9.18□□□□□ -0.94
VPS13D-212ENST00000543766 GLYCTKQ8IVS8 523 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 C7orf31Q8N865 590 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 HTRA1Q92743 480 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 MAP6Q96JE9 813 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 DNAJC7Q99615 494 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 SLC29A1Q99808 456 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 OSBPL7Q9BZF2 842 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 PCDHGC3Q9UN70 934 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 TTLL8A6PVC2 850 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 H3BQV1 296 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 FKBP9O95302 570 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 P4HBP07237 508 aaKnown RBP9.18□□□□□ -0.94
VPS13D-212ENST00000543766 ATP5F1P24539 256 aaPredicted RBP9.18□□□□□ -0.94
VPS13D-212ENST00000543766 PPM1AP35813 382 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 ARSDP51689 593 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 GRM3Q14832 879 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 USPL1Q5W0Q7 1092 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 G2E3Q7L622 706 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 LMO7Q8WWI1 1683 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 DNAJC9Q8WXX5 260 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 SNX19Q92543 992 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 NAPGQ99747 312 aaPredicted RBP9.18□□□□□ -0.94
VPS13D-212ENST00000543766 TBCCD1Q9NVR7 557 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 COX16Q9P0S2 106 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 PARP4Q9UKK3 1724 aaKnown RBP9.18□□□□□ -0.94
VPS13D-212ENST00000543766 SLIT3O75094 1523 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 CYP3A7-CYP3A51PA0A087WV96 503 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 PLOD2O00469 737 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 TM9SF1O15321 606 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 NDUFS2O75306 463 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 ALDH2P05091 517 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 ALADP13716 330 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 NELFEP18615 380 aaKnown RBP9.18□□□□□ -0.94
VPS13D-212ENST00000543766 TFEBP19484 476 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 CYP3A7P24462 503 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 CAPZA1P52907 286 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 POLGP54098 1239 aaPredicted RBP9.18□□□□□ -0.94
VPS13D-212ENST00000543766 PRKG2Q13237 762 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 NR1I3Q14994 352 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 NDUFAF5Q5TEU4 345 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 PLA2G4FQ68DD2 849 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 TRAF7Q6Q0C0 670 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 ZNF572Q7Z3I7 529 aaPredicted RBP9.18□□□□□ -0.94
VPS13D-212ENST00000543766 CACNA2D3Q8IZS8 1091 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 BANPQ8N9N5 519 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 DNAAF3Q8N9W5 541 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 LINC00301Q8NCQ3 95 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 TTLL11Q8NHH1 800 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 VANGL1Q8TAA9 524 aaPredicted RBP9.18□□□□□ -0.94
VPS13D-212ENST00000543766 ENKURQ8TC29 256 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 HPS1Q92902 700 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 PTPRN2Q92932 1015 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 C11orf84Q9BUA3 381 aaPredicted RBP9.18□□□□□ -0.94
VPS13D-212ENST00000543766 NAPBQ9H115 298 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 KCNMB3Q9NPA1 279 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 SPATA6Q9NWH7 488 aaPredicted RBP9.18□□□□□ -0.94
VPS13D-212ENST00000543766 NMRK1Q9NWW6 199 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 EPS15L1Q9UBC2 864 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 PCDHGB6Q9Y5F9 930 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 ST14Q9Y5Y6 855 aa9.18□□□□□ -0.94
VPS13D-212ENST00000543766 BCL9LQ86UU0 1499 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 FAM83GA6ND36 823 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 BTBD19C9JJ37 291 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 K7EPI3 171 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 AP3D1O14617 1153 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 IDH3BO43837 385 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 CDC123O75794 336 aaPredicted RBP9.17□□□□□ -0.94
VPS13D-212ENST00000543766 KRT9P35527 623 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 EIF4A3P38919 411 aaKnown RBP9.17□□□□□ -0.94
VPS13D-212ENST00000543766 PCDH1Q08174 1060 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 C19orf57Q0VDD7 668 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 TRAP1Q12931 704 aaKnown RBP9.17□□□□□ -0.94
VPS13D-212ENST00000543766 STXBP2Q15833 593 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 ADGRG6Q86SQ4 1221 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 FAM160B2Q86V87 743 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 FBXO22Q8NEZ5 403 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 ADCY4Q8NFM4 1077 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 OR56B2PQ8NGI1 322 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 OLFM1Q99784 485 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 MTMR4Q9NYA4 1195 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 ACTR3BQ9P1U1 418 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 CTTNBP2NLQ9P2B4 639 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 DNMT3LQ9UJW3 386 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 HPSEQ9Y251 543 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 NAALAD2Q9Y3Q0 740 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 NCAPD2Q15021 1401 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 TISP43B9A030 160 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 B9A039 149 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 H0YCG3 227 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 ZNF197O14709 1029 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 GPC4O75487 556 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 ALDH1A2O94788 518 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 STARD3NLO95772 234 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 SRGAP2BP0DMP2 458 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 TLX1P31314 330 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms