RNA–Protein interactions for RNA: ENST00000543695.5

LDHA-222, Transcript of lactate dehydrogenase A, human

TSL 5

Gene LDHA, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-222	ENST00000543695	OR6B3	Q8NGW1	331 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	CPT1B	Q92523	772 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	MAML1	Q92585	1016 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	C18orf25	Q96B23	403 aa	Predicted RBP	11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	FAF2	Q96CS3	445 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	PRMT1	Q99873	361 aa	Known RBP	11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	CALN1	Q9BXU9	219 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	CXCL16	Q9H2A7	254 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	NXF3	Q9H4D5	531 aa	Known RBP	11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	ACTR5	Q9H9F9	607 aa	Predicted RBP	11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	CTNNAL1	Q9UBT7	734 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	GTF2IRD1	Q9UHL9	959 aa		11.72	□□□□□ -0.53
LDHA-222	ENST00000543695	SMIM28	A0A1B0GU29	152 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695		A8MXQ7	604 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	APOL1	O14791	398 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	PAPSS1	O43252	624 aa	Predicted RBP	11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	GHR	P10912	638 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	GNAT1	P11488	350 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	WARS	P23381	471 aa	Known RBP	11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	GCA	P28676	217 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	RGS7	P49802	495 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	TAF6	P49848	677 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	GDF10	P55107	478 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	RNASEL	Q05823	741 aa	Known RBP	11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	PDE4C	Q08493	712 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	PDIA2	Q13087	525 aa	Known RBP	11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	HIC1	Q14526	733 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	TMED2	Q15363	201 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	TAF5	Q15542	800 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	SOWAHA	Q2M3V2	549 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	C15orf59	Q2T9L4	293 aa	Predicted RBP	11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	FBXO47	Q5MNV8	452 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	SLC9A4	Q6AI14	798 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	GDF6	Q6KF10	455 aa	Predicted RBP	11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	C4orf22	Q6V702	233 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	ARHGEF18	Q6ZSZ5	1173 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	SLC26A9	Q7LBE3	791 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	TRABD2A	Q86V40	505 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	UNC45B	Q8IWX7	931 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	CYP4X1	Q8N118	509 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	C12orf29	Q8N999	325 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	ANKRD52	Q8NB46	1076 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	SPATA18	Q8TC71	538 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	FAM172A	Q8WUF8	416 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	KBTBD7	Q8WVZ9	684 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	DYDC1	Q8WWB3	177 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	DNAJB3	Q8WWF6	145 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	CKAP2	Q8WWK9	683 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.71	□□□□□ -0.53	9e-7	■■■□□ 18.5
LDHA-222	ENST00000543695	VWCE	Q96DN2	955 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	RTP4	Q96DX8	246 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	SGSM3	Q96HU1	749 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	CABS1	Q96KC9	395 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	HSFY1	Q96LI6	401 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	ZNF670	Q9BS34	389 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	FRMD8	Q9BZ67	464 aa	Predicted RBP	11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	NKX2-4	Q9H2Z4	354 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	SNX25	Q9H3E2	840 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	PRDM12	Q9H4Q4	367 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	PCDH18	Q9HCL0	1135 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	FAM49B	Q9NUQ9	324 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	PIN4	Q9Y237	131 aa	Known RBP	11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	GINS2	Q9Y248	185 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	PCDHA11	Q9Y5I1	949 aa		11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	11.71	□□□□□ -0.53
LDHA-222	ENST00000543695	PATJ	Q8NI35	1801 aa		11.71	□□□□□ -0.54
LDHA-222	ENST00000543695	GOLGA6L7	A0A1B0GV03	622 aa		11.7	□□□□□ -0.54
LDHA-222	ENST00000543695	BCLAF3	A2AJT9	711 aa	Known RBP	11.7	□□□□□ -0.54
LDHA-222	ENST00000543695	KPNA7	A9QM74	516 aa		11.7	□□□□□ -0.54
LDHA-222	ENST00000543695	CHAD	O15335	359 aa		11.7	□□□□□ -0.54
LDHA-222	ENST00000543695	PRPF4	O43172	522 aa	Known RBP eCLIP	11.7	□□□□□ -0.54
LDHA-222	ENST00000543695	TREH	O43280	583 aa		11.7	□□□□□ -0.54
LDHA-222	ENST00000543695	GABBR2	O75899	941 aa		11.7	□□□□□ -0.54
LDHA-222	ENST00000543695	SELP	P16109	830 aa		11.7	□□□□□ -0.54
LDHA-222	ENST00000543695	ZFX	P17010	805 aa	Predicted RBP	11.7	□□□□□ -0.54
LDHA-222	ENST00000543695	LRPAP1	P30533	357 aa		11.7	□□□□□ -0.54
LDHA-222	ENST00000543695	GNL1	P36915	607 aa	Predicted RBP	11.7	□□□□□ -0.54
LDHA-222	ENST00000543695	RABGGTB	P53611	331 aa		11.7	□□□□□ -0.54
LDHA-222	ENST00000543695	IFT88	Q13099	833 aa		11.7	□□□□□ -0.54
LDHA-222	ENST00000543695	MMRN1	Q13201	1228 aa		11.7	□□□□□ -0.54
LDHA-222	ENST00000543695	FASTKD3	Q14CZ7	662 aa	Known RBP	11.7	□□□□□ -0.54
LDHA-222	ENST00000543695	KLHL38	Q2WGJ6	581 aa		11.7	□□□□□ -0.54
LDHA-222	ENST00000543695	LACTB2	Q53H82	288 aa	Predicted RBP	11.7	□□□□□ -0.54
LDHA-222	ENST00000543695	ANKRD20A8P	Q5CZ79	823 aa		11.7	□□□□□ -0.54
LDHA-222	ENST00000543695	SH3PXD2A	Q5TCZ1	1133 aa		11.7	□□□□□ -0.54
LDHA-222	ENST00000543695	DARS2	Q6PI48	645 aa	Known RBP	11.7	□□□□□ -0.54
LDHA-222	ENST00000543695	TAX1BP1	Q86VP1	789 aa		11.7	□□□□□ -0.54
LDHA-222	ENST00000543695	ZBED8	Q8IZ13	594 aa		11.7	□□□□□ -0.54
LDHA-222	ENST00000543695	TOP6BL	Q8N6T0	577 aa		11.7	□□□□□ -0.54
LDHA-222	ENST00000543695	ANKS4B	Q8N8V4	417 aa		11.7	□□□□□ -0.54
LDHA-222	ENST00000543695	PHOSPHO2	Q8TCD6	241 aa		11.7	□□□□□ -0.54
LDHA-222	ENST00000543695	CENPI	Q92674	756 aa	Predicted RBP	11.7	□□□□□ -0.54
LDHA-222	ENST00000543695	PIWIL1	Q96J94	861 aa	Known RBP	11.7	□□□□□ -0.54
LDHA-222	ENST00000543695	C11orf84	Q9BUA3	381 aa	Predicted RBP	11.7	□□□□□ -0.54
LDHA-222	ENST00000543695	SNRNP25	Q9BV90	132 aa	Known RBP	11.7	□□□□□ -0.54
LDHA-222	ENST00000543695	KDM4C	Q9H3R0	1056 aa		11.7	□□□□□ -0.54
LDHA-222	ENST00000543695	VPS37B	Q9H9H4	285 aa		11.7	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms