RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 EFEMP1Q12805 493 aa7.52□□□□□ -1.21
NUP43-206ENST00000543637 CUL2Q13617 745 aa7.52□□□□□ -1.21
NUP43-206ENST00000543637 STILQ15468 1287 aa7.52□□□□□ -1.21
NUP43-206ENST00000543637 TPD52L1Q16890 204 aaPredicted RBP7.52□□□□□ -1.21
NUP43-206ENST00000543637 PLK5Q496M5 336 aa7.52□□□□□ -1.21
NUP43-206ENST00000543637 C10orf76Q5T2E6 689 aa7.52□□□□□ -1.21
NUP43-206ENST00000543637 ARHGAP17Q68EM7 881 aa7.52□□□□□ -1.21
NUP43-206ENST00000543637 NAIF1Q69YI7 327 aaPredicted RBP7.52□□□□□ -1.21
NUP43-206ENST00000543637 ANO7Q6IWH7 933 aa7.52□□□□□ -1.21
NUP43-206ENST00000543637 PIGZQ86VD9 579 aa7.52□□□□□ -1.21
NUP43-206ENST00000543637 MIB1Q86YT6 1006 aa7.52□□□□□ -1.21
NUP43-206ENST00000543637 PPM1KQ8N3J5 372 aa7.52□□□□□ -1.21
NUP43-206ENST00000543637 ZNF513Q8N8E2 541 aaPredicted RBP7.52□□□□□ -1.21
NUP43-206ENST00000543637 IL17RCQ8NAC3 791 aa7.52□□□□□ -1.21
NUP43-206ENST00000543637 EHBP1Q8NDI1 1231 aa7.52□□□□□ -1.21
NUP43-206ENST00000543637 SPATA20Q8TB22 786 aa7.52□□□□□ -1.21
NUP43-206ENST00000543637 UCMAQ8WVF2 138 aa7.52□□□□□ -1.21
NUP43-206ENST00000543637 ERCC4Q92889 916 aaPredicted RBP7.52□□□□□ -1.21
NUP43-206ENST00000543637 ZFRQ96KR1 1074 aaKnown RBP7.52□□□□□ -1.21
NUP43-206ENST00000543637 CNOT6LQ96LI5 555 aaKnown RBP7.52□□□□□ -1.21
NUP43-206ENST00000543637 IPO9Q96P70 1041 aaKnown RBP7.52□□□□□ -1.21
NUP43-206ENST00000543637 TPSD1Q9BZJ3 242 aa7.52□□□□□ -1.21
NUP43-206ENST00000543637 DUSP15Q9H1R2 295 aaPredicted RBP7.52□□□□□ -1.21
NUP43-206ENST00000543637 PARD6AQ9NPB6 346 aa7.52□□□□□ -1.21
NUP43-206ENST00000543637 VPS45Q9NRW7 570 aa7.52□□□□□ -1.21
NUP43-206ENST00000543637 ABCC13Q9NSE7 274 aa7.52□□□□□ -1.21
NUP43-206ENST00000543637 DNAJC17Q9NVM6 304 aaKnown RBP7.52□□□□□ -1.21
NUP43-206ENST00000543637 POLR3BQ9NW08 1133 aaPredicted RBP7.52□□□□□ -1.21
NUP43-206ENST00000543637 PCDHB4Q9Y5E5 795 aa7.52□□□□□ -1.21
NUP43-206ENST00000543637 USP3Q9Y6I4 520 aa7.52□□□□□ -1.21
NUP43-206ENST00000543637 SPAG17Q6Q759 2223 aa7.52□□□□□ -1.21
NUP43-206ENST00000543637 SLC12A8A0AV02 714 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 DCDC2BA2VCK2 349 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 BIN1O00499 593 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 SLC30A4O14863 429 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 XPO1O14980 1071 aaKnown RBP7.51□□□□□ -1.21
NUP43-206ENST00000543637 KHNYNO15037 678 aaKnown RBP7.51□□□□□ -1.21
NUP43-206ENST00000543637 P4HA2O15460 535 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 HOXC11O43248 304 aaPredicted RBP7.51□□□□□ -1.21
NUP43-206ENST00000543637 STC2O76061 302 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 PAEPP09466 180 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 SETSIPP0DME0 302 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 MPLP40238 635 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 HARS2P49590 506 aaKnown RBP7.51□□□□□ -1.21
NUP43-206ENST00000543637 PMS1P54277 932 aaKnown RBP7.51□□□□□ -1.21
NUP43-206ENST00000543637 PDE4CQ08493 712 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 CCDC6Q16204 474 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 GOLGA7BQ2TAP0 167 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 GAB4Q2WGN9 574 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 CBWD6Q4V339 395 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 MPPE1Q53F39 396 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 RAB41Q5JT25 222 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 CBWD3Q5JTY5 395 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 CBWD5Q5RIA9 395 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 TMEM270Q6UE05 265 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 SLC36A4Q6YBV0 504 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 LPCAT2Q7L5N7 544 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 GPRIN1Q7Z2K8 1008 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 RASSF3Q86WH2 238 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 C12orf40Q86WS4 652 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 DENND1CQ8IV53 801 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 CHPFQ8IZ52 775 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 SIX6OS1Q8N1H7 587 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 TRIML1Q8N9V2 468 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 TERB1Q8NA31 727 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 UBA3Q8TBC4 463 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 DDI1Q8WTU0 396 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 HMGB4Q8WW32 186 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 NELFBQ8WX92 580 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 EZH1Q92800 747 aaPredicted RBP7.51□□□□□ -1.21
NUP43-206ENST00000543637 SLC35C1Q96A29 364 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 PLD4Q96BZ4 506 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 SRRTQ9BXP5 876 aaKnown RBP7.51□□□□□ -1.21
NUP43-206ENST00000543637 NMUR1Q9HB89 426 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 OSER1Q9NX31 292 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 MARCH2Q9P0N8 246 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 MAN1B1Q9UKM7 699 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 TSPAN16Q9UKR8 245 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 STARD13Q9Y3M8 1113 aa7.51□□□□□ -1.21
NUP43-206ENST00000543637 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.51□□□□□ -1.21
NUP43-206ENST00000543637 MYO18AQ92614 2054 aaKnown RBP7.5□□□□□ -1.21
NUP43-206ENST00000543637 TCRBV21S2A2A0A5A6 115 aa7.5□□□□□ -1.21
NUP43-206ENST00000543637 BCLAF3A2AJT9 711 aaKnown RBP7.5□□□□□ -1.21
NUP43-206ENST00000543637 SGK1O00141 431 aa7.5□□□□□ -1.21
NUP43-206ENST00000543637 GFRA2O00451 464 aa7.5□□□□□ -1.21
NUP43-206ENST00000543637 DCLK1O15075 740 aa7.5□□□□□ -1.21
NUP43-206ENST00000543637 NPC1O15118 1278 aa7.5□□□□□ -1.21
NUP43-206ENST00000543637 MDM4O15151 490 aa7.5□□□□□ -1.21
NUP43-206ENST00000543637 PMM2O15305 246 aa7.5□□□□□ -1.21
NUP43-206ENST00000543637 AP5Z1O43299 807 aa7.5□□□□□ -1.21
NUP43-206ENST00000543637 MED7O43513 233 aa7.5□□□□□ -1.21
NUP43-206ENST00000543637 TIMM44O43615 452 aa7.5□□□□□ -1.21
NUP43-206ENST00000543637 CACNG3O60359 315 aa7.5□□□□□ -1.21
NUP43-206ENST00000543637 NDUFS2O75306 463 aa7.5□□□□□ -1.21
NUP43-206ENST00000543637 ZNF217O75362 1048 aa7.5□□□□□ -1.21
NUP43-206ENST00000543637 AFPP02771 609 aaKnown RBP7.5□□□□□ -1.21
NUP43-206ENST00000543637 LCP1P13796 627 aa7.5□□□□□ -1.21
NUP43-206ENST00000543637 HOXB2P14652 356 aa7.5□□□□□ -1.21
NUP43-206ENST00000543637 HOXC13P31276 330 aa7.5□□□□□ -1.21
NUP43-206ENST00000543637 WASP42768 502 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms