RNA–Protein interactions for RNA: ENST00000543475.1

SMCR5-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 5, humanhuman

BASIC

Gene SMCR5, Length 2,844 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR5-201ENST00000543475 DDX18Q9NVP1 670 aaKnown RBP12.98□□□□□ -0.33
SMCR5-201ENST00000543475 SEPT9Q9UHD8 586 aaPredicted RBP12.98□□□□□ -0.33
SMCR5-201ENST00000543475 LOC100653049A0A140TA62 436 aa12.98□□□□□ -0.33
SMCR5-201ENST00000543475 TTLL13PA6NNM8 815 aa12.98□□□□□ -0.33
SMCR5-201ENST00000543475 ITM2AO43736 263 aa12.98□□□□□ -0.33
SMCR5-201ENST00000543475 KRT34O76011 436 aa12.98□□□□□ -0.33
SMCR5-201ENST00000543475 PMLP29590 882 aa12.98□□□□□ -0.33
SMCR5-201ENST00000543475 ALDH1A3P47895 512 aa12.98□□□□□ -0.33
SMCR5-201ENST00000543475 PGM5Q15124 567 aa12.98□□□□□ -0.33
SMCR5-201ENST00000543475 TLR1Q15399 786 aa12.98□□□□□ -0.33
SMCR5-201ENST00000543475 FAXCQ5TGI0 409 aa12.98□□□□□ -0.33
SMCR5-201ENST00000543475 RSPH3Q86UC2 560 aa12.98□□□□□ -0.33
SMCR5-201ENST00000543475 SYTL5Q8TDW5 730 aaPredicted RBP12.98□□□□□ -0.33
SMCR5-201ENST00000543475 JDP2Q8WYK2 163 aa12.98□□□□□ -0.33
SMCR5-201ENST00000543475 HAPLN2Q9GZV7 340 aa12.98□□□□□ -0.33
SMCR5-201ENST00000543475 STN1Q9H668 368 aaKnown RBP12.98□□□□□ -0.33
SMCR5-201ENST00000543475 CISHQ9NSE2 258 aa12.98□□□□□ -0.33
SMCR5-201ENST00000543475 CIDEBQ9UHD4 219 aa12.98□□□□□ -0.33
SMCR5-201ENST00000543475 LZTS1Q9Y250 596 aa12.98□□□□□ -0.33
SMCR5-201ENST00000543475 GMEB1Q9Y692 573 aa12.98□□□□□ -0.33
SMCR5-201ENST00000543475 NRXN2Q9P2S2 1712 aa12.98□□□□□ -0.33
SMCR5-201ENST00000543475 STRNO43815 780 aa12.98□□□□□ -0.33
SMCR5-201ENST00000543475 TFAP2AP05549 437 aa12.98□□□□□ -0.33
SMCR5-201ENST00000543475 NCF2P19878 526 aaPredicted RBP12.98□□□□□ -0.33
SMCR5-201ENST00000543475 YY1P25490 414 aa12.98□□□□□ -0.33
SMCR5-201ENST00000543475 SLC1A6P48664 564 aa12.98□□□□□ -0.33
SMCR5-201ENST00000543475 PSMC1P62191 440 aaKnown RBP12.98□□□□□ -0.33
SMCR5-201ENST00000543475 HPCAP84074 193 aa12.98□□□□□ -0.33
SMCR5-201ENST00000543475 BTKQ06187 659 aa12.98□□□□□ -0.33
SMCR5-201ENST00000543475 TBL3Q12788 808 aaKnown RBP12.98□□□□□ -0.33
SMCR5-201ENST00000543475 SEZ6Q53EL9 994 aa12.98□□□□□ -0.33
SMCR5-201ENST00000543475 HSP90AA5PQ58FG0 334 aa12.98□□□□□ -0.33
SMCR5-201ENST00000543475 KLC3Q6P597 504 aa12.98□□□□□ -0.33
SMCR5-201ENST00000543475 NCAPG2Q86XI2 1143 aa12.98□□□□□ -0.33
SMCR5-201ENST00000543475 RBM12BQ8IXT5 1001 aaKnown RBP12.98□□□□□ -0.33
SMCR5-201ENST00000543475 FBXW8Q8N3Y1 598 aa12.98□□□□□ -0.33
SMCR5-201ENST00000543475 TFAP2BQ92481 460 aa12.98□□□□□ -0.33
SMCR5-201ENST00000543475 ATP6V0A1Q93050 837 aa12.98□□□□□ -0.33
SMCR5-201ENST00000543475 ZNF778Q96MU6 729 aa12.98□□□□□ -0.33
SMCR5-201ENST00000543475 RSAD1Q9HA92 442 aa12.98□□□□□ -0.33
SMCR5-201ENST00000543475 USP29Q9HBJ7 922 aa12.98□□□□□ -0.33
SMCR5-201ENST00000543475 TJP2Q9UDY2 1190 aa12.98□□□□□ -0.33
SMCR5-201ENST00000543475 TCP10L2B9ZVM9 353 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 POLRMTO00411 1230 aaKnown RBP12.97□□□□□ -0.33
SMCR5-201ENST00000543475 LDHAP00338 332 aaKnown RBP12.97□□□□□ -0.33
SMCR5-201ENST00000543475 CST3P01034 146 aaPredicted RBP12.97□□□□□ -0.33
SMCR5-201ENST00000543475 APRTP07741 180 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 ATP6V1B1P15313 513 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 RPL10AP62906 217 aaKnown RBP12.97□□□□□ -0.33
SMCR5-201ENST00000543475 MMRN1Q13201 1228 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 PEX6Q13608 980 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 CNGA3Q16281 694 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 NADK2Q4G0N4 442 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 PTPN20Q4JDL3 420 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 OGFRL1Q5TC84 451 aaPredicted RBP12.97□□□□□ -0.33
SMCR5-201ENST00000543475 SLFN12LQ6IEE8 588 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 SEPT12Q8IYM1 358 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 ADGRF2Q8IZF7 708 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 MARVELD2Q8N4S9 558 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 UBR7Q8N806 425 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 PPP4R1Q8TF05 950 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 LZICQ8WZA0 190 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 DCUN1D1Q96GG9 259 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 FRMD8Q9BZ67 464 aaPredicted RBP12.97□□□□□ -0.33
SMCR5-201ENST00000543475 GRIP2Q9C0E4 1043 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 NRDE2Q9H7Z3 1164 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 IFT122Q9HBG6 1241 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 PAK5Q9P286 719 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 STYXL1Q9Y6J8 313 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 AHDC1Q5TGY3 1603 aaPredicted RBP12.97□□□□□ -0.33
SMCR5-201ENST00000543475 H3BNX3 289 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 ZSCAN9O15535 394 aaPredicted RBP12.97□□□□□ -0.33
SMCR5-201ENST00000543475 KCNN4O15554 427 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 DENRO43583 198 aaKnown RBP12.97□□□□□ -0.33
SMCR5-201ENST00000543475 ADCY3O60266 1144 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 CCDC166P0CW27 439 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 DESP17661 470 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 ITGAXP20702 1163 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 MIPP30301 263 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 L1CAMP32004 1257 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 ABCD1P33897 745 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 CAP2P40123 477 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 SP4Q02446 784 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 SNAPC2Q13487 334 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 NOMO1Q15155 1222 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 TEDDM1Q5T9Z0 273 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 PDPK2PQ6A1A2 396 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 SWSAP1Q6NVH7 229 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 UNC5AQ6ZN44 842 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 KBTBD6Q86V97 674 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 CMASQ8NFW8 434 aaPredicted RBP12.97□□□□□ -0.33
SMCR5-201ENST00000543475 PRMT6Q96LA8 375 aaPredicted RBP12.97□□□□□ -0.33
SMCR5-201ENST00000543475 NLRP4Q96MN2 994 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 ARID2Q68CP9 1835 aa12.97□□□□□ -0.33
SMCR5-201ENST00000543475 SCN9AQ15858 1988 aa12.96□□□□□ -0.33
SMCR5-201ENST00000543475 HMX2A2RU54 273 aa12.96□□□□□ -0.33
SMCR5-201ENST00000543475 ASS1P00966 412 aaKnown RBP12.96□□□□□ -0.33
SMCR5-201ENST00000543475 CDH5P33151 784 aaPredicted RBP12.96□□□□□ -0.33
SMCR5-201ENST00000543475 PTGER2P43116 358 aa12.96□□□□□ -0.33
SMCR5-201ENST00000543475 MBLAC2Q68D91 279 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms