RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 NCAM2O15394 837 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 DUSP11O75319 330 aaKnown RBP7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 SERPINF2P08697 491 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 MYCLP1P12525 358 aaPredicted RBP7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 TGM2P21980 687 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 RFC1P35251 1148 aaPredicted RBP7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 ARFIP2P53365 341 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 CDH8P55286 799 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 MAPRE2Q15555 327 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 TFDP3Q5H9I0 405 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 FAXCQ5TGI0 409 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 MARC1Q5VT66 337 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 TFAP2DQ7Z6R9 452 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 MTMR14Q8NCE2 650 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 IL31RAQ8NI17 732 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 CNDP2Q96KP4 475 aaKnown RBP7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 ZSWIM1Q9BR11 485 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 FRMD8P1Q9BZ68 369 aaPredicted RBP7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 GIMAP4Q9NUV9 329 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 HNRNPCL2B2RXH8 293 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 SMIM22K7EJ46 135 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 MUSKO15146 869 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 HNRNPCL1O60812 293 aaKnown RBP7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 CRTAMO95727 393 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 HNRNPCP07910 306 aaKnown RBP eCLIP7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 PAEPP09466 180 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 RENBPP51606 427 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 C6orf10Q5SRN2 563 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 ZNF574Q6ZN55 896 aaPredicted RBP7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 C3orf62Q6ZUJ4 267 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 DENND5BQ6ZUT9 1274 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 SLC13A5Q86YT5 568 aaPredicted RBP7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 SUSD6Q92537 303 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 SLC39A3Q9BRY0 314 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 CLPBQ9H078 707 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 KCNMB3Q9NPA1 279 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 NT5MQ9NPB1 228 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 TMEM51Q9NW97 253 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 TRIM10Q9UDY6 481 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 MAFFQ9ULX9 164 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 RPS6KL1Q9Y6S9 549 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 LUC7L3O95232 432 aaKnown RBP7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 ATP5C1P36542 298 aaKnown RBP7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 C1QBPQ07021 282 aaKnown RBP7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 PDCLQ13371 301 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 ANGPT1Q15389 498 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 PDCD2Q16342 344 aaPredicted RBP7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 E4F1Q66K89 784 aaPredicted RBP7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 HIPK4Q8NE63 616 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 LRRC1Q9BTT6 524 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 ADAM33Q9BZ11 813 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 PSMC3IPQ9P2W1 217 aaPredicted RBP7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 A0A1W2PRQ8 180 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 PHF20L1A8MW92 1017 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 NFKBIEO00221 500 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 SRP72O76094 671 aaKnown RBP7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 ASGR1P07306 291 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 SELPP16109 830 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 ITGB5P18084 799 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 KRT4P19013 534 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 CLNS1AP54105 237 aaKnown RBP7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 PPP2R2AP63151 447 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 PLCL1Q15111 1095 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 FIGNQ5HY92 759 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 WSCD1Q658N2 575 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 KRT80Q6KB66 452 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 FBXO38Q6PIJ6 1188 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 CACUL1Q86Y37 369 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 KIAA0895Q8NCT3 520 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 TPCN2Q8NHX9 752 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 COG1Q8WTW3 980 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 IPCEF1Q8WWN9 437 aaPredicted RBP7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 TGS1Q96RS0 853 aaKnown RBP7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 CORO1BQ9BR76 489 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 FAM129AQ9BZQ8 928 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 ZCWPW1Q9H0M4 648 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 RNPEPQ9H4A4 650 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 MARCH2Q9P0N8 246 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 TRAV19A0A0A6YYK7 116 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 KPNA3O00505 521 aaPredicted RBP7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 GYG2O15488 501 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 ATP9AO75110 1047 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 VPS26AO75436 327 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 HAUS5O94927 633 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 AARSP49588 968 aaKnown RBP eCLIP7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 ZNF280AP59817 542 aaPredicted RBP7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 MCL1Q07820 350 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 FNDC3BQ53EP0 1204 aaKnown RBP7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 LGI2Q8N0V4 545 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 CASP10Q92851 521 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 MTBPQ96DY7 904 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 TBCBQ99426 244 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 RUBCNLQ9H714 662 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 RNF19AQ9NV58 838 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 PCMTD2Q9NV79 361 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 RBM22Q9NW64 420 aaKnown RBP eCLIP7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 WWOXQ9NZC7 414 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 ZIM2Q9NZV7 527 aa7.11□□□□□ -1.27
SRGAP1-206ENST00000543397 FBXO10Q9UK96 956 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms