RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 HNRNPA1P09651 372 aaKnown RBP eCLIP11.13□□□□□ -0.63
DDB1-221ENST00000543162 ZDHHC11BP0C7U3 371 aa11.13□□□□□ -0.63
DDB1-221ENST00000543162 RARGP13631 454 aa11.13□□□□□ -0.63
DDB1-221ENST00000543162 TCF4P15884 667 aa11.13□□□□□ -0.63
DDB1-221ENST00000543162 PRLRP16471 622 aa11.13□□□□□ -0.63
DDB1-221ENST00000543162 HOXA9P31269 272 aa11.13□□□□□ -0.63
DDB1-221ENST00000543162 CXCR5P32302 372 aa11.13□□□□□ -0.63
DDB1-221ENST00000543162 GBP1P32455 592 aa11.13□□□□□ -0.63
DDB1-221ENST00000543162 RDXP35241 583 aaKnown RBP11.13□□□□□ -0.63
DDB1-221ENST00000543162 PPP3CCP48454 512 aa11.13□□□□□ -0.63
DDB1-221ENST00000543162 MARCKSL1P49006 195 aa11.13□□□□□ -0.63
DDB1-221ENST00000543162 HDAC4P56524 1084 aa11.13□□□□□ -0.63
DDB1-221ENST00000543162 RWDD2BP57060 319 aa11.13□□□□□ -0.63
DDB1-221ENST00000543162 PITX1P78337 314 aaPredicted RBP11.13□□□□□ -0.63
DDB1-221ENST00000543162 AMPD2Q01433 879 aa11.13□□□□□ -0.63
DDB1-221ENST00000543162 DEUP1Q05D60 604 aa11.13□□□□□ -0.63
DDB1-221ENST00000543162 NME3Q13232 169 aa11.13□□□□□ -0.63
DDB1-221ENST00000543162 PABPC1LQ4VXU2 614 aaKnown RBP11.13□□□□□ -0.63
DDB1-221ENST00000543162 RAB6CQ53S08 254 aa11.13□□□□□ -0.63
DDB1-221ENST00000543162 ZFYVE27Q5T4F4 411 aa11.13□□□□□ -0.63
DDB1-221ENST00000543162 MSANTD2Q6P1R3 559 aa11.13□□□□□ -0.63
DDB1-221ENST00000543162 SND1Q7KZF4 910 aaKnown RBP eCLIP11.13□□□□□ -0.633e-7■■■□□ 15.4
DDB1-221ENST00000543162 POLNQ7Z5Q5 900 aa11.13□□□□□ -0.63
DDB1-221ENST00000543162 TADA2BQ86TJ2 420 aa11.13□□□□□ -0.63
DDB1-221ENST00000543162 ADAM32Q8TC27 787 aa11.13□□□□□ -0.63
DDB1-221ENST00000543162 DQX1Q8TE96 717 aaKnown RBP11.13□□□□□ -0.63
DDB1-221ENST00000543162 OSBPL9Q96SU4 736 aa11.13□□□□□ -0.63
DDB1-221ENST00000543162 CDK5RAP1Q96SZ6 601 aaKnown RBP11.13□□□□□ -0.63
DDB1-221ENST00000543162 CDCA3Q99618 268 aaPredicted RBP11.13□□□□□ -0.63
DDB1-221ENST00000543162 RAB6CQ9H0N0 254 aa11.13□□□□□ -0.63
DDB1-221ENST00000543162 SMOC2Q9H3U7 446 aa11.13□□□□□ -0.63
DDB1-221ENST00000543162 ZWILCHQ9H900 591 aa11.13□□□□□ -0.63
DDB1-221ENST00000543162 OLA1Q9NTK5 396 aaKnown RBP11.13□□□□□ -0.63
DDB1-221ENST00000543162 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.13□□□□□ -0.63
DDB1-221ENST00000543162 DDIT4Q9NX09 232 aa11.13□□□□□ -0.63
DDB1-221ENST00000543162 COX16Q9P0S2 106 aa11.13□□□□□ -0.63
DDB1-221ENST00000543162 PCSK1NQ9UHG2 260 aa11.13□□□□□ -0.63
DDB1-221ENST00000543162 USP18Q9UMW8 372 aa11.13□□□□□ -0.63
DDB1-221ENST00000543162 RANBP2P49792 3224 aaKnown RBP11.13□□□□□ -0.63
DDB1-221ENST00000543162 ATG2AQ2TAZ0 1938 aa11.13□□□□□ -0.63
DDB1-221ENST00000543162 LAMA2P24043 3122 aaKnown RBP11.12□□□□□ -0.63
DDB1-221ENST00000543162 ZNF840PA6NDX5 716 aa11.12□□□□□ -0.63
DDB1-221ENST00000543162 TLR5O60602 858 aa11.12□□□□□ -0.63
DDB1-221ENST00000543162 SRGAP2O75044 1071 aa11.12□□□□□ -0.63
DDB1-221ENST00000543162 XYLBO75191 536 aa11.12□□□□□ -0.63
DDB1-221ENST00000543162 RFPL2O75678 378 aa11.12□□□□□ -0.63
DDB1-221ENST00000543162 ENDOD1O94919 500 aa11.12□□□□□ -0.63
DDB1-221ENST00000543162 PEX5P50542 639 aa11.12□□□□□ -0.63
DDB1-221ENST00000543162 SLC25A11Q02978 314 aaKnown RBP11.12□□□□□ -0.63
DDB1-221ENST00000543162 TUBB2AQ13885 445 aa11.12□□□□□ -0.63
DDB1-221ENST00000543162 ODF2Q5BJF6 829 aa11.12□□□□□ -0.63
DDB1-221ENST00000543162 C10orf120Q5SQS8 335 aa11.12□□□□□ -0.63
DDB1-221ENST00000543162 HECTD3Q5T447 861 aa11.12□□□□□ -0.63
DDB1-221ENST00000543162 OTUD1Q5VV17 481 aaPredicted RBP11.12□□□□□ -0.63
DDB1-221ENST00000543162 SNX30Q5VWJ9 437 aa11.12□□□□□ -0.63
DDB1-221ENST00000543162 BNIPLQ7Z465 357 aa11.12□□□□□ -0.63
DDB1-221ENST00000543162 TAC4Q86UU9 113 aa11.12□□□□□ -0.63
DDB1-221ENST00000543162 KATNAL2Q8IYT4 538 aa11.12□□□□□ -0.63
DDB1-221ENST00000543162 ALG3Q92685 438 aa11.12□□□□□ -0.63
DDB1-221ENST00000543162 PGAP3Q96FM1 320 aaPredicted RBP11.12□□□□□ -0.63
DDB1-221ENST00000543162 PBKQ96KB5 322 aa11.12□□□□□ -0.63
DDB1-221ENST00000543162 GCNAQ96QF7 691 aa11.12□□□□□ -0.63
DDB1-221ENST00000543162 CORO1BQ9BR76 489 aa11.12□□□□□ -0.63
DDB1-221ENST00000543162 TUBB2BQ9BVA1 445 aa11.12□□□□□ -0.63
DDB1-221ENST00000543162 ADAM33Q9BZ11 813 aa11.12□□□□□ -0.63
DDB1-221ENST00000543162 NACA2Q9H009 215 aa11.12□□□□□ -0.63
DDB1-221ENST00000543162 NSUN3Q9H649 340 aaKnown RBP11.12□□□□□ -0.63
DDB1-221ENST00000543162 ZNF334Q9HCZ1 680 aaPredicted RBP11.12□□□□□ -0.63
DDB1-221ENST00000543162 ASAH2Q9NR71 780 aa11.12□□□□□ -0.63
DDB1-221ENST00000543162 PIGVQ9NUD9 493 aa11.12□□□□□ -0.63
DDB1-221ENST00000543162 TMEM51Q9NW97 253 aa11.12□□□□□ -0.63
DDB1-221ENST00000543162 ZDHHC7Q9NXF8 308 aa11.12□□□□□ -0.63
DDB1-221ENST00000543162 DDX56Q9NY93 547 aaKnown RBP11.12□□□□□ -0.63
DDB1-221ENST00000543162 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.12□□□□□ -0.63
DDB1-221ENST00000543162 CALCOCO1Q9P1Z2 691 aa11.12□□□□□ -0.63
DDB1-221ENST00000543162 NUDT5Q9UKK9 219 aa11.12□□□□□ -0.63
DDB1-221ENST00000543162 TRIOBPQ9H2D6 2365 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 TMEM265A0A087WTH1 108 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 CES2O00748 559 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 CEP104O60308 925 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 ZRANB2O95218 330 aaKnown RBP eCLIP11.11□□□□□ -0.63
DDB1-221ENST00000543162 FGF19O95750 216 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 IGLV3-25P01717 112 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 F11P03951 625 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 KRT1P04264 644 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 MYL4P12829 197 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 PTPN2P17706 415 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 IL1R2P27930 398 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 GABRR2P28476 465 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 ATXN1P54253 815 aaKnown RBP11.11□□□□□ -0.63
DDB1-221ENST00000543162 EFEMP1Q12805 493 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 SMTNL2Q2TAL5 461 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 BOLA3Q53S33 107 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 KCNT1Q5JUK3 1230 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 ZNF697Q5TEC3 545 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 TXNRD3NBQ6F5E7 133 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 FAM131BQ86XD5 332 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 HS6ST3Q8IZP7 471 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 ZNF276Q8N554 614 aa11.11□□□□□ -0.63
DDB1-221ENST00000543162 COG1Q8WTW3 980 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms