RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 E5RJQ4 531 aa17.21■□□□□ 0.35
KDM2B-216ENST00000543025 GPR25O00155 361 aa17.21■□□□□ 0.35
KDM2B-216ENST00000543025 APOL1O14791 398 aa17.21■□□□□ 0.35
KDM2B-216ENST00000543025 NVLO15381 856 aaKnown RBP17.21■□□□□ 0.35
KDM2B-216ENST00000543025 RARBP10826 455 aa17.21■□□□□ 0.35
KDM2B-216ENST00000543025 BCAR1P56945 870 aa17.21■□□□□ 0.35
KDM2B-216ENST00000543025 SESN3P58005 492 aa17.21■□□□□ 0.35
KDM2B-216ENST00000543025 ARHGAP24Q8N264 748 aa17.21■□□□□ 0.35
KDM2B-216ENST00000543025 CXorf38Q8TB03 319 aa17.21■□□□□ 0.35
KDM2B-216ENST00000543025 TRAPPC12Q8WVT3 735 aa17.21■□□□□ 0.35
KDM2B-216ENST00000543025 LRRC39Q96DD0 335 aa17.21■□□□□ 0.35
KDM2B-216ENST00000543025 PTPN18Q99952 460 aa17.21■□□□□ 0.35
KDM2B-216ENST00000543025 MINDY3Q9H8M7 445 aa17.21■□□□□ 0.35
KDM2B-216ENST00000543025 ETNK2Q9NVF9 386 aa17.21■□□□□ 0.35
KDM2B-216ENST00000543025 NMRK1Q9NWW6 199 aa17.21■□□□□ 0.35
KDM2B-216ENST00000543025 MKS1Q9NXB0 559 aa17.21■□□□□ 0.35
KDM2B-216ENST00000543025 BCLAF3A2AJT9 711 aaKnown RBP17.2■□□□□ 0.34
KDM2B-216ENST00000543025 CXorf49A8MYA2 514 aaPredicted RBP17.2■□□□□ 0.34
KDM2B-216ENST00000543025 PIK3R2O00459 728 aa17.2■□□□□ 0.34
KDM2B-216ENST00000543025 APRTP07741 180 aa17.2■□□□□ 0.34
KDM2B-216ENST00000543025 STAG3L1P0CL83 205 aa17.2■□□□□ 0.34
KDM2B-216ENST00000543025 IL4RP24394 825 aa17.2■□□□□ 0.34
KDM2B-216ENST00000543025 CCNFP41002 786 aa17.2■□□□□ 0.34
KDM2B-216ENST00000543025 MRPS5P82675 430 aaKnown RBP17.2■□□□□ 0.34
KDM2B-216ENST00000543025 TMPRSS15P98073 1019 aa17.2■□□□□ 0.34
KDM2B-216ENST00000543025 BOLA3Q53S33 107 aa17.2■□□□□ 0.34
KDM2B-216ENST00000543025 FAXCQ5TGI0 409 aa17.2■□□□□ 0.34
KDM2B-216ENST00000543025 ANKRD23Q86SG2 305 aa17.2■□□□□ 0.34
KDM2B-216ENST00000543025 CAND1Q86VP6 1230 aaKnown RBP17.2■□□□□ 0.34
KDM2B-216ENST00000543025 E2F7Q96AV8 911 aa17.2■□□□□ 0.34
KDM2B-216ENST00000543025 PIWIL1Q96J94 861 aaKnown RBP17.2■□□□□ 0.34
KDM2B-216ENST00000543025 MECRQ9BV79 373 aa17.2■□□□□ 0.34
KDM2B-216ENST00000543025 BARX2Q9UMQ3 279 aaPredicted RBP17.2■□□□□ 0.34
KDM2B-216ENST00000543025 PDHXO00330 501 aa17.2■□□□□ 0.34
KDM2B-216ENST00000543025 KRT38O76015 456 aa17.2■□□□□ 0.34
KDM2B-216ENST00000543025 APOEP02649 317 aa17.2■□□□□ 0.34
KDM2B-216ENST00000543025 GSTA2P09210 222 aa17.2■□□□□ 0.34
KDM2B-216ENST00000543025 MAGEA6P43360 314 aa17.2■□□□□ 0.34
KDM2B-216ENST00000543025 APLP1P51693 650 aa17.2■□□□□ 0.34
KDM2B-216ENST00000543025 EFCAB12Q6NXP0 572 aa17.2■□□□□ 0.34
KDM2B-216ENST00000543025 SCYL2Q6P3W7 929 aa17.2■□□□□ 0.34
KDM2B-216ENST00000543025 ALYREFQ86V81 257 aaKnown RBP17.2■□□□□ 0.34
KDM2B-216ENST00000543025 ARMC2Q8NEN0 867 aa17.2■□□□□ 0.34
KDM2B-216ENST00000543025 STMN2Q93045 179 aa17.2■□□□□ 0.34
KDM2B-216ENST00000543025 MTBPQ96DY7 904 aa17.2■□□□□ 0.34
KDM2B-216ENST00000543025 ZNF333Q96JL9 665 aa17.2■□□□□ 0.34
KDM2B-216ENST00000543025 PRMT7Q9NVM4 692 aaPredicted RBP17.2■□□□□ 0.34
KDM2B-216ENST00000543025 ARMCX1Q9P291 453 aa17.2■□□□□ 0.34
KDM2B-216ENST00000543025 TSPAN16Q9UKR8 245 aa17.2■□□□□ 0.34
KDM2B-216ENST00000543025 RFPL1O75677 317 aa17.19■□□□□ 0.34
KDM2B-216ENST00000543025 GRAP2O75791 330 aa17.19■□□□□ 0.34
KDM2B-216ENST00000543025 PSMG1O95456 288 aa17.19■□□□□ 0.34
KDM2B-216ENST00000543025 IQCF3P0C7M6 154 aa17.19■□□□□ 0.34
KDM2B-216ENST00000543025 CLCN3P51790 818 aa17.19■□□□□ 0.34
KDM2B-216ENST00000543025 BST1Q10588 318 aa17.19■□□□□ 0.34
KDM2B-216ENST00000543025 CELF3Q5SZQ8 465 aaKnown RBP17.19■□□□□ 0.34
KDM2B-216ENST00000543025 FAM182AQ5T1J6 154 aa17.19■□□□□ 0.34
KDM2B-216ENST00000543025 SNX30Q5VWJ9 437 aa17.19■□□□□ 0.34
KDM2B-216ENST00000543025 SLC9A4Q6AI14 798 aa17.19■□□□□ 0.34
KDM2B-216ENST00000543025 PQLC3Q8N755 202 aa17.19■□□□□ 0.34
KDM2B-216ENST00000543025 HPDLQ96IR7 371 aa17.19■□□□□ 0.34
KDM2B-216ENST00000543025 SPATC1LQ9H0A9 340 aa17.19■□□□□ 0.34
KDM2B-216ENST00000543025 ASB7Q9H672 318 aa17.19■□□□□ 0.34
KDM2B-216ENST00000543025 PLAC1Q9HBJ0 212 aa17.19■□□□□ 0.34
KDM2B-216ENST00000543025 CREBZFQ9NS37 354 aa17.19■□□□□ 0.34
KDM2B-216ENST00000543025 SLC45A1Q9Y2W3 748 aa17.19■□□□□ 0.34
KDM2B-216ENST00000543025 LRRC37A2A6NM11 1700 aa17.19■□□□□ 0.34
KDM2B-216ENST00000543025 MANSC4A6NHS7 340 aaPredicted RBP17.19■□□□□ 0.34
KDM2B-216ENST00000543025 SLC15A5A6NIM6 579 aa17.19■□□□□ 0.34
KDM2B-216ENST00000543025 EIF4E1BA6NMX2 242 aaKnown RBP17.19■□□□□ 0.34
KDM2B-216ENST00000543025 A8MXQ7 604 aa17.19■□□□□ 0.34
KDM2B-216ENST00000543025 CAPN9O14815 690 aa17.19■□□□□ 0.34
KDM2B-216ENST00000543025 KRT36O76013 467 aa17.19■□□□□ 0.34
KDM2B-216ENST00000543025 PDHA1P08559 390 aa17.19■□□□□ 0.34
KDM2B-216ENST00000543025 CYP2C8P10632 490 aa17.19■□□□□ 0.34
KDM2B-216ENST00000543025 NDST1P52848 882 aa17.19■□□□□ 0.34
KDM2B-216ENST00000543025 TNFAIP2Q03169 654 aa17.19■□□□□ 0.34
KDM2B-216ENST00000543025 SLC34A1Q06495 639 aa17.19■□□□□ 0.34
KDM2B-216ENST00000543025 KLC1Q07866 573 aa17.19■□□□□ 0.34
KDM2B-216ENST00000543025 INCA1Q0VD86 236 aa17.19■□□□□ 0.34
KDM2B-216ENST00000543025 CCDC14Q49A88 953 aa17.19■□□□□ 0.34
KDM2B-216ENST00000543025 LCLAT1Q6UWP7 414 aa17.19■□□□□ 0.34
KDM2B-216ENST00000543025 PAXIP1Q6ZW49 1069 aaPredicted RBP17.19■□□□□ 0.34
KDM2B-216ENST00000543025 TEKT4Q8WW24 435 aa17.19■□□□□ 0.34
KDM2B-216ENST00000543025 SLC13A1Q9BZW2 595 aa17.19■□□□□ 0.34
KDM2B-216ENST00000543025 PCDH18Q9HCL0 1135 aa17.19■□□□□ 0.34
KDM2B-216ENST00000543025 SIRPGQ9P1W8 387 aa17.19■□□□□ 0.34
KDM2B-216ENST00000543025 SLC26A2P50443 739 aa17.18■□□□□ 0.34
KDM2B-216ENST00000543025 C4orf22Q6V702 233 aa17.18■□□□□ 0.34
KDM2B-216ENST00000543025 ARID3BQ8IVW6 561 aaPredicted RBP17.18■□□□□ 0.34
KDM2B-216ENST00000543025 MCUQ8NE86 351 aa17.18■□□□□ 0.34
KDM2B-216ENST00000543025 PCDH19Q8TAB3 1148 aa17.18■□□□□ 0.34
KDM2B-216ENST00000543025 RAB3IL1Q8TBN0 382 aa17.18■□□□□ 0.34
KDM2B-216ENST00000543025 WDR60Q8WVS4 1066 aa17.18■□□□□ 0.34
KDM2B-216ENST00000543025 USP6NLQ92738 828 aa17.18■□□□□ 0.34
KDM2B-216ENST00000543025 MPHOSPH6Q99547 160 aaKnown RBP17.18■□□□□ 0.34
KDM2B-216ENST00000543025 NFKBIZQ9BYH8 718 aa17.18■□□□□ 0.34
KDM2B-216ENST00000543025 WWP1Q9H0M0 922 aa17.18■□□□□ 0.34
KDM2B-216ENST00000543025 NGRNQ9NPE2 291 aaKnown RBP17.18■□□□□ 0.34
KDM2B-216ENST00000543025 ARHGEF4Q9NR80 690 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms