RNA–Protein interactions for RNA: ENST00000542930.1

C2CD3-219, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 524 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-219ENST00000542930 SNX19Q92543 992 aa9.97□□□□□ -0.81
C2CD3-219ENST00000542930 TTC9Q92623 222 aa9.97□□□□□ -0.81
C2CD3-219ENST00000542930 MED8Q96G25 268 aa9.97□□□□□ -0.81
C2CD3-219ENST00000542930 PCED1BQ96HM7 432 aa9.97□□□□□ -0.81
C2CD3-219ENST00000542930 CNDP2Q96KP4 475 aaKnown RBP9.97□□□□□ -0.81
C2CD3-219ENST00000542930 REEP2Q9BRK0 252 aa9.97□□□□□ -0.81
C2CD3-219ENST00000542930 PARVGQ9HBI0 331 aa9.97□□□□□ -0.81
C2CD3-219ENST00000542930 TM9SF3Q9HD45 589 aa9.97□□□□□ -0.81
C2CD3-219ENST00000542930 DACH1Q9UI36 760 aa9.97□□□□□ -0.81
C2CD3-219ENST00000542930 ITGA11Q9UKX5 1188 aa9.97□□□□□ -0.81
C2CD3-219ENST00000542930 NOL7Q9UMY1 257 aaKnown RBP9.97□□□□□ -0.81
C2CD3-219ENST00000542930 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.97□□□□□ -0.81
C2CD3-219ENST00000542930 A0A1B0GTQ1 180 aa9.96□□□□□ -0.82
C2CD3-219ENST00000542930 SYNCRIPO60506 623 aaKnown RBP9.96□□□□□ -0.82
C2CD3-219ENST00000542930 FAM13AO94988 1023 aa9.96□□□□□ -0.82
C2CD3-219ENST00000542930 KRT19P08727 400 aa9.96□□□□□ -0.82
C2CD3-219ENST00000542930 YWHAQP27348 245 aa9.96□□□□□ -0.82
C2CD3-219ENST00000542930 ACADVLP49748 655 aa9.96□□□□□ -0.82
C2CD3-219ENST00000542930 TUBP50607 506 aa9.96□□□□□ -0.82
C2CD3-219ENST00000542930 WNT7BP56706 349 aa9.96□□□□□ -0.82
C2CD3-219ENST00000542930 IRX6P78412 446 aaPredicted RBP9.96□□□□□ -0.82
C2CD3-219ENST00000542930 RBP5P82980 135 aa9.96□□□□□ -0.82
C2CD3-219ENST00000542930 IL9RQ01113 521 aa9.96□□□□□ -0.82
C2CD3-219ENST00000542930 IFRD2Q12894 506 aaPredicted RBP9.96□□□□□ -0.82
C2CD3-219ENST00000542930 DNAJC3Q13217 504 aa9.96□□□□□ -0.82
C2CD3-219ENST00000542930 ARHGAP40Q5TG30 622 aa9.96□□□□□ -0.82
C2CD3-219ENST00000542930 SCARA3Q6AZY7 606 aa9.96□□□□□ -0.82
C2CD3-219ENST00000542930 HTR3DQ70Z44 454 aa9.96□□□□□ -0.82
C2CD3-219ENST00000542930 POMGNT1Q8WZA1 660 aa9.96□□□□□ -0.82
C2CD3-219ENST00000542930 FBXO32Q969P5 355 aa9.96□□□□□ -0.82
C2CD3-219ENST00000542930 WBP2Q969T9 261 aa9.96□□□□□ -0.82
C2CD3-219ENST00000542930 FIZ1Q96SL8 496 aa9.96□□□□□ -0.82
C2CD3-219ENST00000542930 CPNE5Q9HCH3 593 aa9.96□□□□□ -0.82
C2CD3-219ENST00000542930 IL17BQ9UHF5 180 aa9.96□□□□□ -0.82
C2CD3-219ENST00000542930 TMEM131Q92545 1883 aa9.96□□□□□ -0.82
C2CD3-219ENST00000542930 CBX4O00257 560 aa9.95□□□□□ -0.82
C2CD3-219ENST00000542930 GREM1O60565 184 aa9.95□□□□□ -0.82
C2CD3-219ENST00000542930 RTN3O95197 1032 aaPredicted RBP9.95□□□□□ -0.82
C2CD3-219ENST00000542930 PDGFRBP09619 1106 aa9.95□□□□□ -0.82
C2CD3-219ENST00000542930 IRF1P10914 325 aa9.95□□□□□ -0.82
C2CD3-219ENST00000542930 ACO1P21399 889 aaKnown RBP9.95□□□□□ -0.82
C2CD3-219ENST00000542930 ADSSP30520 456 aa9.95□□□□□ -0.82
C2CD3-219ENST00000542930 COPAP53621 1224 aa9.95□□□□□ -0.82
C2CD3-219ENST00000542930 CACNA2D1P54289 1103 aa9.95□□□□□ -0.82
C2CD3-219ENST00000542930 PCBP4P57723 403 aaKnown RBP9.95□□□□□ -0.82
C2CD3-219ENST00000542930 ILKQ13418 452 aa9.95□□□□□ -0.82
C2CD3-219ENST00000542930 GNL2Q13823 731 aaKnown RBP9.95□□□□□ -0.82
C2CD3-219ENST00000542930 POSTNQ15063 836 aa9.95□□□□□ -0.82
C2CD3-219ENST00000542930 KCNT1Q5JUK3 1230 aa9.95□□□□□ -0.82
C2CD3-219ENST00000542930 COLEC12Q5KU26 742 aa9.95□□□□□ -0.82
C2CD3-219ENST00000542930 LAYNQ6UX15 382 aa9.95□□□□□ -0.82
C2CD3-219ENST00000542930 TPGS1Q6ZTW0 290 aa9.95□□□□□ -0.82
C2CD3-219ENST00000542930 HS2ST1Q7LGA3 356 aa9.95□□□□□ -0.82
C2CD3-219ENST00000542930 ADAT2Q7Z6V5 191 aaKnown RBP9.95□□□□□ -0.82
C2CD3-219ENST00000542930 FAM124AQ86V42 546 aa9.95□□□□□ -0.82
C2CD3-219ENST00000542930 BRSK2Q8IWQ3 736 aa9.95□□□□□ -0.82
C2CD3-219ENST00000542930 NUP93Q8N1F7 819 aa9.95□□□□□ -0.82
C2CD3-219ENST00000542930 SNRNP27Q8WVK2 155 aaKnown RBP9.95□□□□□ -0.82
C2CD3-219ENST00000542930 TSC1Q92574 1164 aa9.95□□□□□ -0.82
C2CD3-219ENST00000542930 CDK5RAP3Q96JB5 506 aa9.95□□□□□ -0.82
C2CD3-219ENST00000542930 C8orf76Q96K31 380 aa9.95□□□□□ -0.82
C2CD3-219ENST00000542930 PLIN2Q99541 437 aa9.95□□□□□ -0.82
C2CD3-219ENST00000542930 TRIM9Q9C026 710 aa9.95□□□□□ -0.82
C2CD3-219ENST00000542930 ELOVL4Q9GZR5 314 aa9.95□□□□□ -0.82
C2CD3-219ENST00000542930 ST6GALNAC4Q9H4F1 302 aa9.95□□□□□ -0.82
C2CD3-219ENST00000542930 C6orf106Q9H6K1 298 aaPredicted RBP9.95□□□□□ -0.82
C2CD3-219ENST00000542930 CCSER2Q9H7U1 834 aa9.95□□□□□ -0.82
C2CD3-219ENST00000542930 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.95□□□□□ -0.82
C2CD3-219ENST00000542930 TMEM30AQ9NV96 361 aa9.95□□□□□ -0.82
C2CD3-219ENST00000542930 THAP10Q9P2Z0 257 aaPredicted RBP9.95□□□□□ -0.82
C2CD3-219ENST00000542930 NXF1Q9UBU9 619 aaKnown RBP9.95□□□□□ -0.82
C2CD3-219ENST00000542930 CHORDC1Q9UHD1 332 aaPredicted RBP9.95□□□□□ -0.82
C2CD3-219ENST00000542930 SIX4Q9UIU6 781 aa9.95□□□□□ -0.82
C2CD3-219ENST00000542930 FBXO10Q9UK96 956 aa9.95□□□□□ -0.82
C2CD3-219ENST00000542930 SLC27A6Q9Y2P4 619 aa9.95□□□□□ -0.82
C2CD3-219ENST00000542930 FLNCQ14315 2725 aa9.95□□□□□ -0.82
C2CD3-219ENST00000542930 TULP1O00294 542 aaPredicted RBP9.94□□□□□ -0.82
C2CD3-219ENST00000542930 GLDCP23378 1020 aa9.94□□□□□ -0.82
C2CD3-219ENST00000542930 WARSP23381 471 aaKnown RBP9.94□□□□□ -0.82
C2CD3-219ENST00000542930 CD27P26842 260 aa9.94□□□□□ -0.82
C2CD3-219ENST00000542930 ACSL1P33121 698 aa9.94□□□□□ -0.82
C2CD3-219ENST00000542930 TOB1P50616 345 aaPredicted RBP9.94□□□□□ -0.82
C2CD3-219ENST00000542930 CDH8P55286 799 aa9.94□□□□□ -0.82
C2CD3-219ENST00000542930 E2F5Q15329 346 aa9.94□□□□□ -0.82
C2CD3-219ENST00000542930 MDH1BQ5I0G3 518 aa9.94□□□□□ -0.82
C2CD3-219ENST00000542930 PRICKLE2Q7Z3G6 844 aa9.94□□□□□ -0.82
C2CD3-219ENST00000542930 GPBP1Q86WP2 473 aa9.94□□□□□ -0.82
C2CD3-219ENST00000542930 GATAD2AQ86YP4 633 aa9.94□□□□□ -0.82
C2CD3-219ENST00000542930 SAP25Q8TEE9 199 aa9.94□□□□□ -0.82
C2CD3-219ENST00000542930 RFFLQ8WZ73 363 aa9.94□□□□□ -0.82
C2CD3-219ENST00000542930 BIRC7Q96CA5 298 aa9.94□□□□□ -0.82
C2CD3-219ENST00000542930 NAF1Q96HR8 494 aaKnown RBP9.94□□□□□ -0.82
C2CD3-219ENST00000542930 HIC2Q96JB3 615 aa9.94□□□□□ -0.82
C2CD3-219ENST00000542930 ZNF578Q96N58 590 aaPredicted RBP9.94□□□□□ -0.82
C2CD3-219ENST00000542930 ELF4Q99607 663 aaPredicted RBP9.94□□□□□ -0.82
C2CD3-219ENST00000542930 FAM213AQ9BRX8 229 aa9.94□□□□□ -0.82
C2CD3-219ENST00000542930 NACA2Q9H009 215 aa9.94□□□□□ -0.82
C2CD3-219ENST00000542930 ZHX3Q9H4I2 956 aa9.94□□□□□ -0.82
C2CD3-219ENST00000542930 CLCA2Q9UQC9 943 aa9.94□□□□□ -0.82
C2CD3-219ENST00000542930 R3HCC1Q9Y3T6 440 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms