RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 ASIC4Q96FT7 647 aa10.51□□□□□ -0.73
TOP3A-208ENST00000542570 NCAPGQ9BPX3 1015 aa10.51□□□□□ -0.73
TOP3A-208ENST00000542570 DMAP1Q9NPF5 467 aaPredicted RBP10.51□□□□□ -0.73
TOP3A-208ENST00000542570 PGAP2Q9UHJ9 254 aa10.51□□□□□ -0.73
TOP3A-208ENST00000542570 LCMT1Q9UIC8 334 aa10.51□□□□□ -0.73
TOP3A-208ENST00000542570 C9IYK1 514 aa10.51□□□□□ -0.73
TOP3A-208ENST00000542570 H0Y626 953 aa10.51□□□□□ -0.73
TOP3A-208ENST00000542570 CYP1A2P05177 515 aa10.51□□□□□ -0.73
TOP3A-208ENST00000542570 PIRTP0C851 137 aa10.51□□□□□ -0.73
TOP3A-208ENST00000542570 RECQLP46063 649 aaPredicted RBP10.51□□□□□ -0.73
TOP3A-208ENST00000542570 GJA9P57773 515 aa10.51□□□□□ -0.73
TOP3A-208ENST00000542570 OVGP1Q12889 678 aa10.51□□□□□ -0.73
TOP3A-208ENST00000542570 PDK1Q15118 436 aa10.51□□□□□ -0.73
TOP3A-208ENST00000542570 CFAP52Q8N1V2 620 aa10.51□□□□□ -0.73
TOP3A-208ENST00000542570 ANKRD52Q8NB46 1076 aa10.51□□□□□ -0.73
TOP3A-208ENST00000542570 DDI1Q8WTU0 396 aa10.51□□□□□ -0.73
TOP3A-208ENST00000542570 ZNF296Q8WUU4 475 aaPredicted RBP10.51□□□□□ -0.73
TOP3A-208ENST00000542570 SMARCD1Q96GM5 515 aa10.51□□□□□ -0.73
TOP3A-208ENST00000542570 DDX27Q96GQ7 796 aaKnown RBP10.51□□□□□ -0.73
TOP3A-208ENST00000542570 C20orf96Q9NUD7 363 aaPredicted RBP10.51□□□□□ -0.73
TOP3A-208ENST00000542570 OR12D3Q9UGF7 316 aa10.51□□□□□ -0.73
TOP3A-208ENST00000542570 PCDHB5Q9Y5E4 795 aa10.51□□□□□ -0.73
TOP3A-208ENST00000542570 CDY1Q9Y6F8 540 aa10.51□□□□□ -0.73
TOP3A-208ENST00000542570 SETSIPP0DME0 302 aa10.51□□□□□ -0.73
TOP3A-208ENST00000542570 ZFXP17010 805 aaPredicted RBP10.51□□□□□ -0.73
TOP3A-208ENST00000542570 AVPR1AP37288 418 aa10.51□□□□□ -0.73
TOP3A-208ENST00000542570 CENPCQ03188 943 aa10.51□□□□□ -0.73
TOP3A-208ENST00000542570 IKBKEQ14164 716 aa10.51□□□□□ -0.73
TOP3A-208ENST00000542570 CCNG2Q16589 344 aa10.51□□□□□ -0.73
TOP3A-208ENST00000542570 SOWAHAQ2M3V2 549 aa10.51□□□□□ -0.73
TOP3A-208ENST00000542570 TIGD5Q53EQ6 642 aa10.51□□□□□ -0.73
TOP3A-208ENST00000542570 WDR93Q6P2C0 686 aa10.51□□□□□ -0.73
TOP3A-208ENST00000542570 RASSF3Q86WH2 238 aa10.51□□□□□ -0.73
TOP3A-208ENST00000542570 CARNMT1Q8N4J0 409 aa10.51□□□□□ -0.73
TOP3A-208ENST00000542570 HES6Q96HZ4 224 aa10.51□□□□□ -0.73
TOP3A-208ENST00000542570 TGS1Q96RS0 853 aaKnown RBP10.51□□□□□ -0.73
TOP3A-208ENST00000542570 SDCBP2Q9H190 292 aa10.51□□□□□ -0.73
TOP3A-208ENST00000542570 PABPC3Q9H361 631 aaKnown RBP10.51□□□□□ -0.73
TOP3A-208ENST00000542570 SIX4Q9UIU6 781 aa10.51□□□□□ -0.73
TOP3A-208ENST00000542570 COL22A1Q8NFW1 1626 aaPredicted RBP10.51□□□□□ -0.73
TOP3A-208ENST00000542570 TMEM191CA6NGB0 347 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 MAPK13O15264 365 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 KRT38O76015 456 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 LRG1P02750 347 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 SKIP12755 728 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 CASP2P42575 452 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 SCNN1BP51168 640 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 MAXP61244 160 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 NFE2Q16621 373 aaPredicted RBP10.5□□□□□ -0.73
TOP3A-208ENST00000542570 ASTE1Q2TB18 679 aaPredicted RBP10.5□□□□□ -0.73
TOP3A-208ENST00000542570 PRSS55Q6UWB4 352 aaPredicted RBP10.5□□□□□ -0.73
TOP3A-208ENST00000542570 COLGALT1Q8NBJ5 622 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 GABPB2Q8TAK5 448 aaPredicted RBP10.5□□□□□ -0.73
TOP3A-208ENST00000542570 TTC25Q96NG3 672 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 RBM22Q9NW64 420 aaKnown RBP eCLIP10.5□□□□□ -0.73
TOP3A-208ENST00000542570 IL1RAPL1Q9NZN1 696 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 CPSF2Q9P2I0 782 aaKnown RBP10.5□□□□□ -0.73
TOP3A-208ENST00000542570 LRCH4O75427 683 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 SUN1O94901 812 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 ATG7O95352 703 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 TBX18O95935 607 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 EDNRBP24530 442 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 KLRC2P26717 231 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 ELK3P41970 407 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 GLRBP48167 497 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 VCPP55072 806 aaKnown RBP10.5□□□□□ -0.73
TOP3A-208ENST00000542570 MAPRE1Q15691 268 aaKnown RBP10.5□□□□□ -0.73
TOP3A-208ENST00000542570 MAP7D1Q3KQU3 841 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 FASTKD1Q53R41 847 aaKnown RBP10.5□□□□□ -0.73
TOP3A-208ENST00000542570 C6orf163Q5TEZ5 329 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 UNC45BQ8IWX7 931 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 CDC26Q8NHZ8 85 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 PCED1BQ96HM7 432 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 CYTH2Q99418 400 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 UNC93B1Q9H1C4 597 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 PAK5Q9P286 719 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 ZMYND8Q9ULU4 1186 aaPredicted RBP10.5□□□□□ -0.73
TOP3A-208ENST00000542570 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.5□□□□□ -0.73
TOP3A-208ENST00000542570 SH3BP1Q9Y3L3 701 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 LGR5O75473 907 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 F2P00734 622 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 KRT4P19013 534 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 CHKAP35790 457 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 FNTAP49354 379 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 GBE1Q04446 702 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 DNAJC3Q13217 504 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 PTK7Q13308 1070 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 TBC1D1Q86TI0 1168 aaPredicted RBP10.5□□□□□ -0.73
TOP3A-208ENST00000542570 DDX53Q86TM3 631 aaKnown RBP10.5□□□□□ -0.73
TOP3A-208ENST00000542570 FAM35AQ86V20 835 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 PIWIL1Q96J94 861 aaKnown RBP10.5□□□□□ -0.73
TOP3A-208ENST00000542570 CXCL16Q9H2A7 254 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 AVENQ9NQS1 362 aaPredicted RBP10.5□□□□□ -0.73
TOP3A-208ENST00000542570 PPME1Q9Y570 386 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 NHSQ6T4R5 1651 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 C4AP0C0L4 1744 aa10.5□□□□□ -0.73
TOP3A-208ENST00000542570 DDX60Q8IY21 1712 aaKnown RBP10.5□□□□□ -0.73
TOP3A-208ENST00000542570 TRIM49D1C9J1S8 452 aa10.49□□□□□ -0.73
TOP3A-208ENST00000542570 GPC4O75487 556 aa10.49□□□□□ -0.73
TOP3A-208ENST00000542570 YWHAQP27348 245 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms