RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 MYLK2Q9H1R3 596 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 LRMDAQ9H2I8 198 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 NRDE2Q9H7Z3 1164 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 POPDC2Q9HBU9 364 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 MKS1Q9NXB0 559 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 GDAP2Q9NXN4 497 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 SLC5A4Q9NY91 659 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 GNEQ9Y223 722 aaKnown RBP6.8□□□□□ -1.32
PTPRO-208ENST00000542557 CHKBQ9Y259 395 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 TTLL3Q9Y4R7 772 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 IKBKGQ9Y6K9 419 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 NRCAMQ92823 1304 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 BTBD19C9JJ37 291 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 PIRO00625 290 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 XPOTO43592 962 aaKnown RBP6.8□□□□□ -1.32
PTPRO-208ENST00000542557 GCATO75600 419 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 GABBR2O75899 941 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 TROVE2P10155 538 aaKnown RBP eCLIP6.8□□□□□ -1.32
PTPRO-208ENST00000542557 FGFR1P11362 822 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 DARSP14868 501 aaKnown RBP6.8□□□□□ -1.32
PTPRO-208ENST00000542557 VAMP1P23763 118 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 CYP2F1P24903 491 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 RBL1P28749 1068 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 ETV4P43268 484 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 NRLP54845 237 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 YWHAGP61981 247 aaKnown RBP eCLIP6.8□□□□□ -1.32
PTPRO-208ENST00000542557 CA9Q16790 459 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 SOWAHAQ2M3V2 549 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 PARP6Q2NL67 630 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 KBTBD12Q3ZCT8 623 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 SLC45A4Q5BKX6 768 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 XKR4Q5GH76 650 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 FBXO47Q5MNV8 452 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 SCYL2Q6P3W7 929 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 MAMSTRQ6ZN01 415 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 STRADAQ7RTN6 431 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 GPR142Q7Z601 462 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 AGGF1Q8N302 714 aaeCLIP6.8□□□□□ -1.32
PTPRO-208ENST00000542557 INPP5DQ92835 1189 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 PBXIP1Q96AQ6 731 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 QKIQ96PU8 341 aaKnown RBP eCLIP6.8□□□□□ -1.32
PTPRO-208ENST00000542557 RAB3IPQ96QF0 476 aaPredicted RBP6.8□□□□□ -1.32
PTPRO-208ENST00000542557 TINF2Q9BSI4 451 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 FAM49BQ9NUQ9 324 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 GPATCH2LQ9NWQ4 482 aa6.8□□□□□ -1.32
PTPRO-208ENST00000542557 RCOR3Q9P2K3 495 aaPredicted RBP6.8□□□□□ -1.32
PTPRO-208ENST00000542557 A8MXQ7 604 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 LPXNO60711 386 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 HNRNPCL1O60812 293 aaKnown RBP6.79□□□□□ -1.32
PTPRO-208ENST00000542557 PEX14O75381 377 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 WFS1O76024 890 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 RECQL4O94761 1208 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 TGDSO95455 350 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 KCNE1P15382 129 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 L1CAMP32004 1257 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 TTC39BQ5VTQ0 682 aaPredicted RBP6.79□□□□□ -1.32
PTPRO-208ENST00000542557 DPP9Q86TI2 863 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 PNMA8AQ86V59 439 aaPredicted RBP6.79□□□□□ -1.32
PTPRO-208ENST00000542557 CAND1Q86VP6 1230 aaKnown RBP6.79□□□□□ -1.32
PTPRO-208ENST00000542557 PSTKQ8IV42 348 aaKnown RBP6.79□□□□□ -1.32
PTPRO-208ENST00000542557 SCUBE3Q8IX30 993 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 TAB3Q8N5C8 712 aaPredicted RBP6.79□□□□□ -1.32
PTPRO-208ENST00000542557 OR6B3Q8NGW1 331 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 KBTBD7Q8WVZ9 684 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 C18orf25Q96B23 403 aaPredicted RBP6.79□□□□□ -1.32
PTPRO-208ENST00000542557 ERP27Q96DN0 273 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 TMEM237Q96Q45 408 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 EIF2AQ9BY44 585 aaKnown RBP6.79□□□□□ -1.32
PTPRO-208ENST00000542557 CXCL16Q9H2A7 254 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 HEY1Q9Y5J3 304 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 CCL15-CCL14A0A0B4J2E2 113 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 HACD1B0YJ81 288 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 KLF11O14901 512 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 KRT16P08779 473 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 EZRP15311 586 aaKnown RBP6.79□□□□□ -1.32
PTPRO-208ENST00000542557 CCNFP41002 786 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 FAAP100Q0VG06 881 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 SEMA5AQ13591 1074 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 CCL15Q16663 113 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 FAM110CQ1W6H9 321 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 DNAJC14Q6Y2X3 702 aaPredicted RBP6.79□□□□□ -1.32
PTPRO-208ENST00000542557 CCDC91Q7Z6B0 441 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 PLEKHH3Q7Z736 793 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 LRRC6Q86X45 466 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 VPS52Q8N1B4 723 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 BRI3BPQ8WY22 251 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 MTBPQ96DY7 904 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 SERAC1Q96JX3 654 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 DPEP3Q9H4B8 488 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 NXF3Q9H4D5 531 aaKnown RBP6.79□□□□□ -1.32
PTPRO-208ENST00000542557 SPON1Q9HCB6 807 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 XAB2Q9HCS7 855 aaKnown RBP6.79□□□□□ -1.32
PTPRO-208ENST00000542557 SETD4Q9NVD3 440 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 MTMR10Q9NXD2 777 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 SLC17A7Q9P2U7 560 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 ZC3H7BQ9UGR2 993 aaKnown RBP6.79□□□□□ -1.32
PTPRO-208ENST00000542557 BAIAP2L1Q9UHR4 511 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 AP4E1Q9UPM8 1137 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 USP3Q9Y6I4 520 aa6.79□□□□□ -1.32
PTPRO-208ENST00000542557 SF3B1O75533 1304 aaKnown RBP eCLIP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms