RNA–Protein interactions for RNA: ENST00000542287.6

ATXN2-215, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATXN2, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-215ENST00000542287 DEFB103AP81534 67 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 OTUD4Q01804 1114 aaKnown RBP6.06□□□□□ -1.44
ATXN2-215ENST00000542287 GPS1Q13098 491 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 IFT88Q13099 833 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 MMRN1Q13201 1228 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 HABP4Q5JVS0 413 aaKnown RBP6.06□□□□□ -1.44
ATXN2-215ENST00000542287 C6orf89Q6UWU4 347 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 CYP4V2Q6ZWL3 525 aaPredicted RBP6.06□□□□□ -1.44
ATXN2-215ENST00000542287 MAB21L3Q8N8X9 362 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 ACTL9Q8TC94 416 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 MGARPQ8TDB4 240 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 ARHGEF2Q92974 986 aaKnown RBP6.06□□□□□ -1.44
ATXN2-215ENST00000542287 CLP1Q92989 425 aaKnown RBP6.06□□□□□ -1.44
ATXN2-215ENST00000542287 C18orf25Q96B23 403 aaPredicted RBP6.06□□□□□ -1.44
ATXN2-215ENST00000542287 CCDC97Q96F63 343 aaPredicted RBP6.06□□□□□ -1.44
ATXN2-215ENST00000542287 KIF12Q96FN5 646 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 CASD1Q96PB1 797 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 RBM15Q96T37 977 aaKnown RBP eCLIP6.06□□□□□ -1.445e-6■■□□□ 11.5
ATXN2-215ENST00000542287 ASB7Q9H672 318 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 SYNCQ9H7C4 482 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 DPP3Q9NY33 737 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 SNTG2Q9NY99 539 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 CXXC1Q9P0U4 656 aaPredicted RBP6.06□□□□□ -1.44
ATXN2-215ENST00000542287 TUBGCP4Q9UGJ1 667 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 E5RJQ4 531 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 DNALI1O14645 258 aaPredicted RBP6.06□□□□□ -1.44
ATXN2-215ENST00000542287 SKAP2O75563 359 aaPredicted RBP6.06□□□□□ -1.44
ATXN2-215ENST00000542287 GABBR2O75899 941 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 FSBPO95073 299 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 NPTXRO95502 500 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 POU3F3P20264 500 aaPredicted RBP6.06□□□□□ -1.44
ATXN2-215ENST00000542287 GCAP28676 217 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 GCKP35557 465 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 VCPP55072 806 aaKnown RBP6.06□□□□□ -1.44
ATXN2-215ENST00000542287 SLC8A3P57103 927 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 ERVK-21P61565 698 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 PLCB3Q01970 1234 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 CNGA2Q16280 664 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 FAM102AQ5T9C2 384 aaPredicted RBP6.06□□□□□ -1.44
ATXN2-215ENST00000542287 ANKRD22Q5VYY1 191 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 PPP1R2P3Q6NXS1 205 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 NPNTQ6UXI9 565 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 OTOP2Q7RTS6 562 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 NT5DC4Q86YG4 428 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 GPR65Q8IYL9 337 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 SLC35B2Q8TB61 432 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 LRRN4Q8WUT4 740 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 HSPH1Q92598 858 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 UROC1Q96N76 676 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 ACAP3Q96P50 834 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 MRPL45Q9BRJ2 306 aaKnown RBP6.06□□□□□ -1.44
ATXN2-215ENST00000542287 VRTNQ9H8Y1 702 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 HOMER3Q9NSC5 361 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 FAM49BQ9NUQ9 324 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 TSPAN16Q9UKR8 245 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 STRIP2Q9ULQ0 834 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 TCRBV7S3A2A0A539 114 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 C5orf60A6NFR6 353 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 ZBBXA8MT70 800 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 SGK1O00141 431 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 ZSCAN9O15535 394 aaPredicted RBP6.06□□□□□ -1.44
ATXN2-215ENST00000542287 KCNE1P15382 129 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 KDELR1P24390 212 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 MAGEA4P43358 317 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 CDO1Q16878 200 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 SYCP2LQ5T4T6 812 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 PPP1R26Q5T8A7 1209 aaPredicted RBP6.06□□□□□ -1.44
ATXN2-215ENST00000542287 DRICH1Q6PGQ1 229 aaPredicted RBP6.06□□□□□ -1.44
ATXN2-215ENST00000542287 ALKAL1Q6UXT8 129 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 FAM183BPQ6ZVS7 135 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 LRRC34Q8IZ02 419 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 LRRC43Q8N309 656 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 ZCCHC9Q8N567 271 aaKnown RBP6.06□□□□□ -1.44
ATXN2-215ENST00000542287 URGCPQ8TCY9 931 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 MCRS1Q96EZ8 462 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 SEC16BQ96JE7 1060 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 PLEKHG4BQ96PX9 1271 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 WDR83Q9BRX9 315 aaKnown RBP6.06□□□□□ -1.44
ATXN2-215ENST00000542287 NXF3Q9H4D5 531 aaKnown RBP6.06□□□□□ -1.44
ATXN2-215ENST00000542287 CNOT10Q9H9A5 744 aaKnown RBP6.06□□□□□ -1.44
ATXN2-215ENST00000542287 SAYSD1Q9NPB0 183 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 INTS9Q9NV88 658 aaKnown RBP6.06□□□□□ -1.44
ATXN2-215ENST00000542287 EURLQ9NYK6 297 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 BARX2Q9UMQ3 279 aaPredicted RBP6.06□□□□□ -1.44
ATXN2-215ENST00000542287 IPPQ9Y573 584 aa6.06□□□□□ -1.44
ATXN2-215ENST00000542287 TDRD15B5MCY1 1934 aaKnown RBP6.05□□□□□ -1.44
ATXN2-215ENST00000542287 TMEM120BA0PK00 339 aa6.05□□□□□ -1.44
ATXN2-215ENST00000542287 SRRM3A6NNA2 597 aaPredicted RBP6.05□□□□□ -1.44
ATXN2-215ENST00000542287 MED7O43513 233 aa6.05□□□□□ -1.44
ATXN2-215ENST00000542287 RTN3O95197 1032 aaPredicted RBP6.05□□□□□ -1.44
ATXN2-215ENST00000542287 MAP3K6O95382 1288 aa6.05□□□□□ -1.44
ATXN2-215ENST00000542287 C1RP00736 705 aa6.05□□□□□ -1.44
ATXN2-215ENST00000542287 LAG3P18627 525 aa6.05□□□□□ -1.44
ATXN2-215ENST00000542287 TFE3P19532 575 aaPredicted RBP6.05□□□□□ -1.44
ATXN2-215ENST00000542287 AKAP5P24588 427 aa6.05□□□□□ -1.44
ATXN2-215ENST00000542287 RDXP35241 583 aaKnown RBP6.05□□□□□ -1.44
ATXN2-215ENST00000542287 GABRB2P47870 512 aa6.05□□□□□ -1.44
ATXN2-215ENST00000542287 TAP1Q03518 808 aa6.05□□□□□ -1.44
ATXN2-215ENST00000542287 UBE3AQ05086 875 aa6.05□□□□□ -1.44
ATXN2-215ENST00000542287 INCA1Q0VD86 236 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms