RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 PCDHAC1Q9H158 963 aa3.77□□□□□ -1.81
USP28-210ENST00000542033 AS3MTQ9HBK9 375 aa3.77□□□□□ -1.81
USP28-210ENST00000542033 RGL1Q9NZL6 768 aa3.77□□□□□ -1.81
USP28-210ENST00000542033 LUZP4Q9P127 313 aa3.77□□□□□ -1.81
USP28-210ENST00000542033 MGAT4CQ9UBM8 478 aa3.77□□□□□ -1.81
USP28-210ENST00000542033 ZMYND8Q9ULU4 1186 aaPredicted RBP3.77□□□□□ -1.81
USP28-210ENST00000542033 SLC27A6Q9Y2P4 619 aa3.77□□□□□ -1.81
USP28-210ENST00000542033 MORC2Q9Y6X9 1032 aaPredicted RBP3.77□□□□□ -1.81
USP28-210ENST00000542033 hCG_1642624A0A1W2PR95 340 aa3.76□□□□□ -1.81
USP28-210ENST00000542033 A8MVJ9 347 aa3.76□□□□□ -1.81
USP28-210ENST00000542033 TARM1B6A8C7 271 aa3.76□□□□□ -1.81
USP28-210ENST00000542033 TMPRSS11DO60235 418 aa3.76□□□□□ -1.81
USP28-210ENST00000542033 EXOC3O60645 756 aa3.76□□□□□ -1.81
USP28-210ENST00000542033 NBNO60934 754 aa3.76□□□□□ -1.81
USP28-210ENST00000542033 EGR1P18146 543 aa3.76□□□□□ -1.81
USP28-210ENST00000542033 CD53P19397 219 aa3.76□□□□□ -1.81
USP28-210ENST00000542033 GABRB3P28472 473 aa3.76□□□□□ -1.81
USP28-210ENST00000542033 TECP42680 631 aa3.76□□□□□ -1.81
USP28-210ENST00000542033 C21orf58P58505 322 aa3.76□□□□□ -1.81
USP28-210ENST00000542033 EIF4A1P60842 406 aaKnown RBP3.76□□□□□ -1.81
USP28-210ENST00000542033 CYP4F2P78329 520 aa3.76□□□□□ -1.81
USP28-210ENST00000542033 HOXA4Q00056 320 aaPredicted RBP3.76□□□□□ -1.81
USP28-210ENST00000542033 STARD3Q14849 445 aa3.76□□□□□ -1.81
USP28-210ENST00000542033 CLCA4Q14CN2 919 aa3.76□□□□□ -1.81
USP28-210ENST00000542033 MPEG1Q2M385 716 aa3.76□□□□□ -1.81
USP28-210ENST00000542033 TRIM72Q6ZMU5 477 aa3.76□□□□□ -1.81
USP28-210ENST00000542033 USP49Q70CQ1 688 aa3.76□□□□□ -1.81
USP28-210ENST00000542033 P3H2Q8IVL5 708 aa3.76□□□□□ -1.81
USP28-210ENST00000542033 SFTPA1Q8IWL2 248 aa3.76□□□□□ -1.81
USP28-210ENST00000542033 NKAPQ8N5F7 415 aaKnown RBP3.76□□□□□ -1.81
USP28-210ENST00000542033 PAF1Q8N7H5 531 aa3.76□□□□□ -1.81
USP28-210ENST00000542033 TERB1Q8NA31 727 aa3.76□□□□□ -1.81
USP28-210ENST00000542033 GLIS1Q8NBF1 620 aa3.76□□□□□ -1.81
USP28-210ENST00000542033 MUL1Q969V5 352 aa3.76□□□□□ -1.81
USP28-210ENST00000542033 GRAMD1AQ96CP6 724 aa3.76□□□□□ -1.81
USP28-210ENST00000542033 LENG8Q96PV6 779 aaPredicted RBP3.76□□□□□ -1.81
USP28-210ENST00000542033 CIPCQ9C0C6 399 aa3.76□□□□□ -1.81
USP28-210ENST00000542033 WDR12Q9GZL7 423 aaKnown RBP3.76□□□□□ -1.81
USP28-210ENST00000542033 ADARB2Q9NS39 739 aaKnown RBP3.76□□□□□ -1.81
USP28-210ENST00000542033 TM7SF3Q9NS93 570 aa3.76□□□□□ -1.81
USP28-210ENST00000542033 VPS51Q9UID3 782 aa3.76□□□□□ -1.81
USP28-210ENST00000542033 ADAM21Q9UKJ8 722 aa3.76□□□□□ -1.81
USP28-210ENST00000542033 PNMA2Q9UL42 364 aa3.76□□□□□ -1.81
USP28-210ENST00000542033 MAGED2Q9UNF1 606 aaPredicted RBP3.76□□□□□ -1.81
USP28-210ENST00000542033 GTF2A1LQ9UNN4 478 aa3.76□□□□□ -1.81
USP28-210ENST00000542033 ADAMTS3O15072 1205 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 ZSCAN9O15535 394 aaPredicted RBP3.75□□□□□ -1.81
USP28-210ENST00000542033 SPRY2O43597 315 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 PIP5K1CO60331 668 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 PLA2G6O60733 806 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 C1QL1O75973 258 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 WDR47O94967 919 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 SRGAP2BP0DMP2 458 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 TMEM225BP0DP42 221 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 FPR3P25089 353 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 MST1P26927 711 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 SLC5A2P31639 672 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 PPM1AP35813 382 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 CCT5P48643 541 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 TNFAIP2Q03169 654 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 NSUN2Q08J23 767 aaKnown RBP eCLIP3.75□□□□□ -1.81
USP28-210ENST00000542033 BIRC3Q13489 604 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 MAPKAPK3Q16644 382 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 SLC5A9Q2M3M2 681 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 ALFQ53S48 1182 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 ARL6IP4Q66PJ3 421 aaKnown RBP3.75□□□□□ -1.81
USP28-210ENST00000542033 RAP1GAP2Q684P5 730 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 FCRLBQ6BAA4 426 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 CCDC70Q6NSX1 233 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 SERPINA13PQ6UXR4 307 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 KIAA0408Q6ZU52 694 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 TTC30AQ86WT1 665 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 SKAP1Q86WV1 359 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 METTL25Q8N6Q8 603 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 SPATA5Q8NB90 893 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 CYP2W1Q8TAV3 490 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 HASPINQ8TF76 798 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 ANP32BQ92688 251 aaKnown RBP3.75□□□□□ -1.81
USP28-210ENST00000542033 WDYHV1Q96HA8 205 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 CRB3Q9BUF7 120 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 STK33Q9BYT3 514 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 NECTIN3Q9NQS3 549 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 LPAR3Q9UBY5 353 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 ZNF69Q9UC07 566 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 CDC23Q9UJX2 597 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 SLC39A10Q9ULF5 831 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 LZTS1Q9Y250 596 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 DGKBQ9Y6T7 804 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 COL15A1P39059 1388 aa3.75□□□□□ -1.81
USP28-210ENST00000542033 CENPJQ9HC77 1338 aaPredicted RBP3.74□□□□□ -1.81
USP28-210ENST00000542033 LRRC3CA6NJW4 275 aa3.74□□□□□ -1.81
USP28-210ENST00000542033 SMIM22K7EJ46 135 aa3.74□□□□□ -1.81
USP28-210ENST00000542033 ZNF213O14771 459 aa3.74□□□□□ -1.81
USP28-210ENST00000542033 GCATO75600 419 aa3.74□□□□□ -1.81
USP28-210ENST00000542033 VIPP01282 170 aa3.74□□□□□ -1.81
USP28-210ENST00000542033 ARP10275 920 aa3.74□□□□□ -1.81
USP28-210ENST00000542033 PECAM1P16284 738 aaPredicted RBP3.74□□□□□ -1.81
USP28-210ENST00000542033 ZNF37AP17032 561 aaPredicted RBP3.74□□□□□ -1.81
USP28-210ENST00000542033 ADRA1DP25100 572 aa3.74□□□□□ -1.81
USP28-210ENST00000542033 GRK6P43250 576 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms