RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 GON4LQ3T8J9 2241 aa16.64■□□□□ 0.25
VARS2-212ENST00000542001 MAFO75444 373 aaPredicted RBP16.64■□□□□ 0.25
VARS2-212ENST00000542001 LYPLA2O95372 231 aa16.64■□□□□ 0.25
VARS2-212ENST00000542001 MMP14P50281 582 aa16.64■□□□□ 0.25
VARS2-212ENST00000542001 HUNKP57058 714 aa16.64■□□□□ 0.25
VARS2-212ENST00000542001 GBE1Q04446 702 aa16.64■□□□□ 0.25
VARS2-212ENST00000542001 KLC1Q07866 573 aa16.64■□□□□ 0.25
VARS2-212ENST00000542001 TRABD2AQ86V40 505 aa16.64■□□□□ 0.25
VARS2-212ENST00000542001 PHF13Q86YI8 300 aaPredicted RBP16.64■□□□□ 0.25
VARS2-212ENST00000542001 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.64■□□□□ 0.25
VARS2-212ENST00000542001 TMEM59LQ9UK28 342 aa16.64■□□□□ 0.25
VARS2-212ENST00000542001 ZNF268Q14587 947 aaPredicted RBP16.63■□□□□ 0.25
VARS2-212ENST00000542001 TCHHL1Q5QJ38 904 aaPredicted RBP16.63■□□□□ 0.25
VARS2-212ENST00000542001 AP1ARQ63HQ0 302 aa16.63■□□□□ 0.25
VARS2-212ENST00000542001 OTOAQ7RTW8 1153 aa16.63■□□□□ 0.25
VARS2-212ENST00000542001 TFAP2DQ7Z6R9 452 aa16.63■□□□□ 0.25
VARS2-212ENST00000542001 C12orf56Q8IXR9 622 aa16.63■□□□□ 0.25
VARS2-212ENST00000542001 SPATA6LQ8N4H0 392 aa16.63■□□□□ 0.25
VARS2-212ENST00000542001 EFHBQ8N7U6 833 aa16.63■□□□□ 0.25
VARS2-212ENST00000542001 SLC16A10Q8TF71 515 aa16.63■□□□□ 0.25
VARS2-212ENST00000542001 UBQLN1Q9UMX0 589 aaKnown RBP16.63■□□□□ 0.25
VARS2-212ENST00000542001 MYPNQ86TC9 1320 aa16.63■□□□□ 0.25
VARS2-212ENST00000542001 NUP188Q5SRE5 1749 aa16.63■□□□□ 0.25
VARS2-212ENST00000542001 SDR42E2A6NKP2 422 aa16.63■□□□□ 0.25
VARS2-212ENST00000542001 GOT1P17174 413 aa16.63■□□□□ 0.25
VARS2-212ENST00000542001 NCALDP61601 193 aa16.63■□□□□ 0.25
VARS2-212ENST00000542001 BIRC2Q13490 618 aa16.63■□□□□ 0.25
VARS2-212ENST00000542001 KPNB1Q14974 876 aaKnown RBP16.63■□□□□ 0.25
VARS2-212ENST00000542001 FSCBQ5H9T9 825 aa16.63■□□□□ 0.25
VARS2-212ENST00000542001 EFHC1Q5JVL4 640 aa16.63■□□□□ 0.25
VARS2-212ENST00000542001 CELF3Q5SZQ8 465 aaKnown RBP16.63■□□□□ 0.25
VARS2-212ENST00000542001 TNS4Q8IZW8 715 aa16.63■□□□□ 0.25
VARS2-212ENST00000542001 ATPAF2Q8N5M1 289 aa16.63■□□□□ 0.25
VARS2-212ENST00000542001 PGLYRP2Q96PD5 576 aa16.63■□□□□ 0.25
VARS2-212ENST00000542001 GPRC5DQ9NZD1 345 aa16.63■□□□□ 0.25
VARS2-212ENST00000542001 IPO11Q9UI26 975 aaKnown RBP16.63■□□□□ 0.25
VARS2-212ENST00000542001 MYH14Q7Z406 1995 aaKnown RBP16.63■□□□□ 0.25
VARS2-212ENST00000542001 TCRBV9S1A1TA0A576 114 aa16.63■□□□□ 0.25
VARS2-212ENST00000542001 RNF103O00237 685 aa16.63■□□□□ 0.25
VARS2-212ENST00000542001 PHGDHO43175 533 aaKnown RBP16.63■□□□□ 0.25
VARS2-212ENST00000542001 BUD23O43709 281 aaKnown RBP16.63■□□□□ 0.25
VARS2-212ENST00000542001 CELF2O95319 508 aaKnown RBP16.63■□□□□ 0.25
VARS2-212ENST00000542001 ATP6V1B1P15313 513 aa16.63■□□□□ 0.25
VARS2-212ENST00000542001 TAC1P20366 129 aa16.63■□□□□ 0.25
VARS2-212ENST00000542001 NUDT2P50583 147 aa16.63■□□□□ 0.25
VARS2-212ENST00000542001 C1orf127Q8N9H9 656 aa16.63■□□□□ 0.25
VARS2-212ENST00000542001 IFT43Q96FT9 208 aa16.63■□□□□ 0.25
VARS2-212ENST00000542001 EPS15L1Q9UBC2 864 aa16.63■□□□□ 0.25
VARS2-212ENST00000542001 AURKCQ9UQB9 309 aa16.63■□□□□ 0.25
VARS2-212ENST00000542001 PDHXO00330 501 aa16.62■□□□□ 0.25
VARS2-212ENST00000542001 SPRP35270 261 aaPredicted RBP16.62■□□□□ 0.25
VARS2-212ENST00000542001 MSX2P35548 267 aaPredicted RBP16.62■□□□□ 0.25
VARS2-212ENST00000542001 WNT7BP56706 349 aa16.62■□□□□ 0.25
VARS2-212ENST00000542001 KLC3Q6P597 504 aa16.62■□□□□ 0.25
VARS2-212ENST00000542001 ECHDC2Q86YB7 292 aa16.62■□□□□ 0.25
VARS2-212ENST00000542001 THEM5Q8N1Q8 247 aa16.62■□□□□ 0.25
VARS2-212ENST00000542001 USP13Q92995 863 aaPredicted RBP16.62■□□□□ 0.25
VARS2-212ENST00000542001 LRFN2Q9ULH4 789 aa16.62■□□□□ 0.25
VARS2-212ENST00000542001 ANGPTL3Q9Y5C1 460 aa16.62■□□□□ 0.25
VARS2-212ENST00000542001 PHRF1Q9P1Y6 1649 aaKnown RBP16.62■□□□□ 0.25
VARS2-212ENST00000542001 PAX7P23759 505 aa16.62■□□□□ 0.25
VARS2-212ENST00000542001 STILQ15468 1287 aa16.62■□□□□ 0.25
VARS2-212ENST00000542001 RFWD2Q8NHY2 731 aa16.62■□□□□ 0.25
VARS2-212ENST00000542001 LMO3Q8TAP4 145 aa16.62■□□□□ 0.25
VARS2-212ENST00000542001 GAD1Q99259 594 aa16.62■□□□□ 0.25
VARS2-212ENST00000542001 MRPL45Q9BRJ2 306 aaKnown RBP16.62■□□□□ 0.25
VARS2-212ENST00000542001 HERPUD2Q9BSE4 406 aa16.62■□□□□ 0.25
VARS2-212ENST00000542001 ELOVL4Q9GZR5 314 aa16.62■□□□□ 0.25
VARS2-212ENST00000542001 LYPLA1O75608 230 aaPredicted RBP16.62■□□□□ 0.25
VARS2-212ENST00000542001 USP17L7P0C7H9 530 aa16.62■□□□□ 0.25
VARS2-212ENST00000542001 UNGP13051 313 aaPredicted RBP16.62■□□□□ 0.25
VARS2-212ENST00000542001 EEF1B2P24534 225 aaKnown RBP16.62■□□□□ 0.25
VARS2-212ENST00000542001 FOXN2P32314 431 aa16.62■□□□□ 0.25
VARS2-212ENST00000542001 OR1G1P47890 313 aa16.62■□□□□ 0.25
VARS2-212ENST00000542001 ITPRIPL1Q6GPH6 555 aa16.62■□□□□ 0.25
VARS2-212ENST00000542001 PLEKHA7Q6IQ23 1121 aa16.62■□□□□ 0.25
VARS2-212ENST00000542001 BORCS6Q96GS4 357 aa16.62■□□□□ 0.25
VARS2-212ENST00000542001 FIZ1Q96SL8 496 aa16.62■□□□□ 0.25
VARS2-212ENST00000542001 GPR88Q9GZN0 384 aa16.62■□□□□ 0.25
VARS2-212ENST00000542001 NXF3Q9H4D5 531 aaKnown RBP16.62■□□□□ 0.25
VARS2-212ENST00000542001 BCAP29Q9UHQ4 241 aa16.62■□□□□ 0.25
VARS2-212ENST00000542001 CASQ2O14958 399 aaPredicted RBP16.61■□□□□ 0.25
VARS2-212ENST00000542001 GNAT1P11488 350 aa16.61■□□□□ 0.25
VARS2-212ENST00000542001 BST1Q10588 318 aa16.61■□□□□ 0.25
VARS2-212ENST00000542001 ALYREFQ86V81 257 aaKnown RBP16.61■□□□□ 0.25
VARS2-212ENST00000542001 NUP93Q8N1F7 819 aa16.61■□□□□ 0.25
VARS2-212ENST00000542001 DDX43Q9NXZ2 648 aaKnown RBP16.61■□□□□ 0.25
VARS2-212ENST00000542001 CD4P01730 458 aa16.61■□□□□ 0.25
VARS2-212ENST00000542001 LMNAP02545 664 aaKnown RBP16.61■□□□□ 0.25
VARS2-212ENST00000542001 GFAPP14136 432 aa16.61■□□□□ 0.25
VARS2-212ENST00000542001 PSMB4P28070 264 aa16.61■□□□□ 0.25
VARS2-212ENST00000542001 BCAT1P54687 386 aa16.61■□□□□ 0.25
VARS2-212ENST00000542001 ZNF484Q5JVG2 852 aa16.61■□□□□ 0.25
VARS2-212ENST00000542001 SPATA2LQ8IUW3 424 aaPredicted RBP16.61■□□□□ 0.25
VARS2-212ENST00000542001 TTC39CQ8N584 583 aa16.61■□□□□ 0.25
VARS2-212ENST00000542001 TWNKQ96RR1 684 aa16.61■□□□□ 0.25
VARS2-212ENST00000542001 DHX33Q9H6R0 707 aaKnown RBP16.61■□□□□ 0.25
VARS2-212ENST00000542001 MINDY3Q9H8M7 445 aa16.61■□□□□ 0.25
VARS2-212ENST00000542001 XAB2Q9HCS7 855 aaKnown RBP16.61■□□□□ 0.25
VARS2-212ENST00000542001 NWD2Q9ULI1 1742 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms