RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 NR1D1P20393 614 aa6.5□□□□□ -1.37
DMD-228ENST00000541735 MAP2K2P36507 400 aa6.5□□□□□ -1.37
DMD-228ENST00000541735 ANXA11P50995 505 aaKnown RBP6.5□□□□□ -1.37
DMD-228ENST00000541735 TBX4P57082 545 aa6.5□□□□□ -1.37
DMD-228ENST00000541735 PLGLB1Q02325 96 aa6.5□□□□□ -1.37
DMD-228ENST00000541735 SUZ12Q15022 739 aaKnown RBP6.5□□□□□ -1.37
DMD-228ENST00000541735 VPS72Q15906 364 aa6.5□□□□□ -1.37
DMD-228ENST00000541735 LPAL2Q16609 132 aa6.5□□□□□ -1.37
DMD-228ENST00000541735 ZNF611Q8N823 705 aa6.5□□□□□ -1.37
DMD-228ENST00000541735 OR6K2Q8NGY2 324 aa6.5□□□□□ -1.37
DMD-228ENST00000541735 MRFAP1L1Q96HT8 127 aa6.5□□□□□ -1.37
DMD-228ENST00000541735 TMEM88BA6NKF7 163 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 IFNAR1P17181 557 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 NFKB1P19838 968 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 PSMD8P48556 350 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 CASP4P49662 377 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 HERVK_113P62684 666 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 POU6F1Q14863 301 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 MINDY4Q4G0A6 757 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 OR14C36Q8NHC7 312 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 UTP15Q8TED0 518 aaKnown RBP6.49□□□□□ -1.37
DMD-228ENST00000541735 KIFC1Q9BW19 673 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 ACAT2Q9BWD1 397 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 ELOVL6Q9H5J4 265 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 VPS51Q9UID3 782 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 DMTF1Q9Y222 760 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 PODXLO00592 558 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 BUD23O43709 281 aaKnown RBP6.49□□□□□ -1.37
DMD-228ENST00000541735 SLC2A4P14672 509 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 RPS12P25398 132 aaKnown RBP6.49□□□□□ -1.37
DMD-228ENST00000541735 S100A5P33763 92 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 GDI2P50395 445 aaKnown RBP6.49□□□□□ -1.37
DMD-228ENST00000541735 AP3M2P53677 418 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 CDH8P55286 799 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 STX4Q12846 297 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 ACVR2BQ13705 512 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 DNAJC14Q6Y2X3 702 aaPredicted RBP6.49□□□□□ -1.37
DMD-228ENST00000541735 SETD6Q8TBK2 473 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 MXRA8Q9BRK3 442 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 OSER1Q9NX31 292 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 MTMR4Q9NYA4 1195 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 INVSQ9Y283 1065 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 MCIDASD6RGH6 385 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 TBL1XO60907 577 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 PNMA6AP0CW24 399 aaPredicted RBP6.49□□□□□ -1.37
DMD-228ENST00000541735 SLC2A3P11169 496 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 VAV1P15498 845 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 HDCP19113 662 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 TFE3P19532 575 aaPredicted RBP6.49□□□□□ -1.37
DMD-228ENST00000541735 CDC27P30260 824 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 RFC5P40937 340 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 LONRF1Q17RB8 773 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 STYK1Q6J9G0 422 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 ILDR2Q71H61 639 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 SRLQ86TD4 932 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 CNDP1Q96KN2 507 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 TNKS2Q9H2K2 1166 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 DPEP2Q9H4A9 486 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 PDGFCQ9NRA1 345 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 ING3Q9NXR8 418 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 VANGL2Q9ULK5 521 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 A0A096LPK6 155 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 RBAK-RBAKDNI3L0D1 243 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 NCAM2O15394 837 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 CST8O60676 142 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 RNASEH2AO75792 299 aaKnown RBP6.49□□□□□ -1.37
DMD-228ENST00000541735 EYA4O95677 639 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 PLGP00747 810 aaPredicted RBP6.49□□□□□ -1.37
DMD-228ENST00000541735 APOA1P02647 267 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 CXCL8P10145 99 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 HTR1BP28222 390 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 BCL2L1Q07817 233 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 KBTBD12Q3ZCT8 623 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 P4HA3Q7Z4N8 544 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 ZNF280BQ86YH2 543 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 USP13Q92995 863 aaPredicted RBP6.49□□□□□ -1.37
DMD-228ENST00000541735 ARHGEF26Q96DR7 871 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 PHF21BQ96EK2 531 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 MCRS1Q96EZ8 462 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 NSMCE4AQ9NXX6 385 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 DNMT3LQ9UJW3 386 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 CHKBQ9Y259 395 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 KANSL1LA0AUZ9 987 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 GOLGA8TH3BQL2 631 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 XPO1O14980 1071 aaKnown RBP6.49□□□□□ -1.37
DMD-228ENST00000541735 JCHAINP01591 159 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 USP17L7P0C7H9 530 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 MYBL1P10243 752 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 KLRK1P26718 216 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 CLCN1P35523 988 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 CPA2P48052 419 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 BACE1P56817 501 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 RPTNQ6XPR3 784 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 RASGRP3Q8IV61 690 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 TSPAN14Q8NG11 270 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 C9orf72Q96LT7 481 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 CRAMP1Q96RY5 1269 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 SPRTNQ9H040 489 aaPredicted RBP6.49□□□□□ -1.37
DMD-228ENST00000541735 HDHD2Q9H0R4 259 aa6.49□□□□□ -1.37
DMD-228ENST00000541735 TMEM60Q9H2L4 133 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms