RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 TSR3Q9UJK0 312 aaKnown RBP15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 GPR75-ASB3A0A0A6YYF3 556 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 C2CD2LO14523 706 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 SMNDC1O75940 238 aaKnown RBP eCLIP15.39■□□□□ 0.051e-8■□□□□ 10.1
SMARCA4-207ENST00000541122 PROCP04070 461 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 PGK2P07205 417 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 IL12RB1P42701 662 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 LRRC74AQ0VAA2 488 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 DCAF6Q58WW2 860 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 DUPD1Q68J44 220 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 C19orf18Q8NEA5 215 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 ART4Q93070 314 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 SLC35C1Q96A29 364 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 CDRT15Q96T59 188 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 TBCBQ99426 244 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 KCNH7Q9NS40 1196 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 IARS2Q9NSE4 1012 aaKnown RBP15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 DDHD2O94830 711 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 CDC25CP30307 473 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 DMPKQ09013 629 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 KCTD21Q4G0X4 260 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 PTRHD1Q6GMV3 140 aaKnown RBP15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 FAM45BPQ6NSW5 357 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 DPY19L2Q6NUT2 758 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 ARHGEF19Q8IW93 802 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 RAB42Q8N4Z0 105 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 URGCPQ8TCY9 931 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 OTULINQ96BN8 352 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 PABPC5Q96DU9 382 aaKnown RBP15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 KAZALD1Q96I82 304 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 HPDLQ96IR7 371 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 FOPNLQ96NB1 174 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 SMARCAD1Q9H4L7 1026 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 FANCEQ9HB96 536 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 A0A087X0B3 334 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 ASB14A6NK59 587 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 MRASO14807 208 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 RPA3P35244 121 aaPredicted RBP15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 IL5RAQ01344 420 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 CYP24A1Q07973 514 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 NEDD8Q15843 81 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 ZNF618Q5T7W0 954 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 SNX32Q86XE0 403 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 AK5Q9Y6K8 562 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 KBTBD13C9JR72 458 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 KRT36O76013 467 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 PGAM1P18669 254 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 NNMTP40261 264 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 GCNT1Q02742 428 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 PCSK7Q16549 785 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 SNX31Q8N9S9 440 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 PYDC1Q8WXC3 89 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 GPRASP2Q96D09 838 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 PPP1R10Q96QC0 940 aaKnown RBP15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 CPNE1Q99829 537 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 TRMT6Q9UJA5 497 aaKnown RBP15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 RNF112Q9ULX5 631 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 DMTF1Q9Y222 760 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 KATNA1O75449 491 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 PDE9AO76083 593 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 SHBGP04278 402 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 PNPLA4P41247 253 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 TRAF2Q12933 501 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 WDR59Q6PJI9 974 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 EXOC3L1Q86VI1 746 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 DGCR14Q96DF8 476 aaKnown RBP15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 SH2D3AQ9BRG2 576 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 CBWD1Q9BRT8 395 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 NOL6Q9H6R4 1146 aaKnown RBP15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 USE1Q9NZ43 259 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 STK39Q9UEW8 545 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 VPS4BO75351 444 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 ARIH2O95376 493 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 ST13P50502 369 aaKnown RBP15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 C1DQ13901 141 aaKnown RBP15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 FASTKQ14296 549 aaKnown RBP15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 SPANXN3Q5MJ09 141 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 FOXR2Q6PJQ5 311 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 ZNF554Q86TJ5 538 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 PALB2Q86YC2 1186 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 EID3Q8N140 333 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 POU5F2Q8N7G0 328 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 SH3KBP1Q96B97 665 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 RPAP3Q9H6T3 665 aaPredicted RBP15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 COPS7BQ9H9Q2 264 aaPredicted RBP15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 FAM49BQ9NUQ9 324 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 POLG2Q9UHN1 485 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 ENOPH1Q9UHY7 261 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 OGTO15294 1046 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 NCAM2O15394 837 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 PEX1O43933 1283 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 ENTPD5O75356 428 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 SSTR1P30872 391 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 RRM2P31350 389 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 TMEM63BQ5T3F8 832 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 UGT2B28Q9BY64 529 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 SYTL2Q9HCH5 934 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 TRPC7Q9HCX4 862 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 VTA1Q9NP79 307 aa15.38■□□□□ 0.05
SMARCA4-207ENST00000541122 TIMMDC1Q9NPL8 285 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms