RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 ADAMTS6Q9UKP5 1117 aa10.75□□□□□ -0.69
CDC42SE1-207ENST00000540998 A0A088AWK7 358 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 INO80B-WBP1J3KQ70 363 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 PROCP04070 461 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 ITGB3P05106 788 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 PDGFRAP16234 1089 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 GSTT1P30711 240 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 AQP4P55087 323 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 CXCL9Q07325 125 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 DLG1Q12959 904 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 KRT72Q14CN4 511 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 NOMO1Q15155 1222 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 LY6KQ17RY6 165 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 DUOXA2Q1HG44 320 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 TTC39BQ5VTQ0 682 aaPredicted RBP10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 DPY19L2Q6NUT2 758 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 PAOXQ6QHF9 649 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 PQLC3Q8N755 202 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 NIPA2Q8N8Q9 360 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 SLC4A11Q8NBS3 891 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 PPP1R14CQ8TAE6 165 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 ALKBH8Q96BT7 664 aaKnown RBP10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 CCDC106Q9BWC9 280 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 INO80BQ9C086 356 aaPredicted RBP10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 RGPD3A6NKT7 1758 aaPredicted RBP10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 RGPD4Q7Z3J3 1758 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 SLC15A5A6NIM6 579 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 ADCY3O60266 1144 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 RNF8O76064 485 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 PGM3O95394 542 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 LSM8O95777 96 aaKnown RBP10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 SNRPAP09012 282 aaKnown RBP10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 EIF4BP23588 611 aaKnown RBP10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 IL4RP24394 825 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 KRT81Q14533 505 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 RBBP5Q15291 538 aaKnown RBP10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 SLFN12LQ6IEE8 588 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 HPS6Q86YV9 775 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 TMPRSS6Q8IU80 811 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 PHTF2Q8N3S3 785 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 PLD5Q8N7P1 536 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 ADAM32Q8TC27 787 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 PPP1R13LQ8WUF5 828 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 HEXIM2Q96MH2 286 aaKnown RBP10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 ANKRD27Q96NW4 1050 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 MIS12Q9H081 205 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 RNPEPQ9H4A4 650 aa10.74□□□□□ -0.69
CDC42SE1-207ENST00000540998 TM7SF2O76062 418 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 IQCF3P0C7M6 154 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 OSBPP22059 807 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 PTPN7P35236 360 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 CCNFP41002 786 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 ROR2Q01974 943 aaKnown RBP10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 DSG1Q02413 1049 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 FASTKD1Q53R41 847 aaKnown RBP10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 STYK1Q6J9G0 422 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 FAM183BPQ6ZVS7 135 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 WDR49Q8IV35 697 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 CMASQ8NFW8 434 aaPredicted RBP10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 PCDH19Q8TAB3 1148 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 LPAR1Q92633 364 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 TMPRSS4Q9NRS4 437 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 FAM49BQ9NUQ9 324 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 TAGLN3Q9UI15 199 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 MAGEA13PA6NCF6 341 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 OPHN1O60890 802 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 CIB2O75838 187 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 ZBED1O96006 694 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 PRKCBP05771 671 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 UBA1P22314 1058 aaKnown RBP10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 CPOXP36551 454 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 ACTR3P61158 418 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 YWHAEP62258 255 aaKnown RBP10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 SLC10A2Q12908 348 aaPredicted RBP10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 USP4Q13107 963 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 MSLNQ13421 630 aaPredicted RBP10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 CNPY1Q3B7I2 92 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 ZNF534Q76KX8 674 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 MYLK4Q86YV6 388 aaPredicted RBP10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 CRLF3Q8IUI8 442 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 TNS4Q8IZW8 715 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 RNF148Q8N7C7 305 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 C1orf127Q8N9H9 656 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 STKLD1Q8NE28 680 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 CLEC4CQ8WTT0 213 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 AZIN2Q96A70 460 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 UBE2OQ9C0C9 1292 aaKnown RBP10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 XAB2Q9HCS7 855 aaKnown RBP10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 ETNK2Q9NVF9 386 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 ZNF212Q9UDV6 495 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 EVPLQ92817 2033 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 CCDC78A2IDD5 438 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 WDR27A2RRH5 827 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 SPATA31C2B4DYI2 1134 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 KIF3CO14782 793 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 BUD23O43709 281 aaKnown RBP10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 TBC1D12O60347 775 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 KRT37O76014 449 aa10.73□□□□□ -0.69
CDC42SE1-207ENST00000540998 TGDSO95455 350 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms