RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 DGKGP49619 791 aa28.3■■■□□ 2.12
CHFR-218ENST00000540963 UNC13DQ70J99 1090 aa28.3■■■□□ 2.12
CHFR-218ENST00000540963 GLRX5Q86SX6 157 aa28.3■■■□□ 2.12
CHFR-218ENST00000540963 NAXDQ8IW45 347 aa28.3■■■□□ 2.12
CHFR-218ENST00000540963 CRYBG2Q8N1P7 616 aa28.3■■■□□ 2.12
CHFR-218ENST00000540963 IQUBQ8NA54 791 aa28.3■■■□□ 2.12
CHFR-218ENST00000540963 DNASE2BQ8WZ79 361 aa28.3■■■□□ 2.12
CHFR-218ENST00000540963 SMOQ99835 787 aa28.3■■■□□ 2.12
CHFR-218ENST00000540963 MAGEF1Q9HAY2 307 aa28.3■■■□□ 2.12
CHFR-218ENST00000540963 CISD3P0C7P0 127 aa28.29■■■□□ 2.12
CHFR-218ENST00000540963 BIRC3Q13489 604 aa28.29■■■□□ 2.12
CHFR-218ENST00000540963 NCOA4Q13772 614 aa28.29■■■□□ 2.12
CHFR-218ENST00000540963 UNC93AQ86WB7 457 aa28.29■■■□□ 2.12
CHFR-218ENST00000540963 NELFCDQ8IXH7 590 aa28.29■■■□□ 2.12
CHFR-218ENST00000540963 LINC00301Q8NCQ3 95 aa28.29■■■□□ 2.12
CHFR-218ENST00000540963 FBXO10Q9UK96 956 aa28.29■■■□□ 2.12
CHFR-218ENST00000540963 SCML2Q9UQR0 700 aa28.29■■■□□ 2.12
CHFR-218ENST00000540963 ITPR1Q14643 2758 aa28.29■■■□□ 2.12
CHFR-218ENST00000540963 EXOC3O60645 756 aa28.28■■■□□ 2.12
CHFR-218ENST00000540963 PPP6R2O75170 966 aa28.28■■■□□ 2.12
CHFR-218ENST00000540963 CD6P30203 668 aa28.28■■■□□ 2.12
CHFR-218ENST00000540963 SCAPQ12770 1279 aa28.28■■■□□ 2.12
CHFR-218ENST00000540963 TOGARAM2Q6ZUX3 1019 aa28.28■■■□□ 2.12
CHFR-218ENST00000540963 ACOT1Q86TX2 421 aa28.28■■■□□ 2.12
CHFR-218ENST00000540963 CADM4Q8NFZ8 388 aa28.28■■■□□ 2.12
CHFR-218ENST00000540963 GOLGA5Q8TBA6 731 aa28.28■■■□□ 2.12
CHFR-218ENST00000540963 PARD3BQ8TEW8 1205 aa28.28■■■□□ 2.12
CHFR-218ENST00000540963 CAMK1GQ96NX5 476 aa28.28■■■□□ 2.12
CHFR-218ENST00000540963 TFIP11Q9UBB9 837 aaKnown RBP28.28■■■□□ 2.12
CHFR-218ENST00000540963 APOBEC2Q9Y235 224 aaKnown RBP28.28■■■□□ 2.12
CHFR-218ENST00000540963 GPSM3Q9Y4H4 160 aa28.28■■■□□ 2.12
CHFR-218ENST00000540963 PLXNB3Q9ULL4 1909 aa28.28■■■□□ 2.12
CHFR-218ENST00000540963 A0A1B0GTW7 788 aa28.27■■■□□ 2.12
CHFR-218ENST00000540963 BEST1O76090 585 aa28.27■■■□□ 2.12
CHFR-218ENST00000540963 C4BPAP04003 597 aaKnown RBP28.27■■■□□ 2.12
CHFR-218ENST00000540963 FTH1P19P0C7X4 201 aa28.27■■■□□ 2.12
CHFR-218ENST00000540963 TRIM21P19474 475 aaKnown RBP28.27■■■□□ 2.12
CHFR-218ENST00000540963 PGFP49763 221 aa28.27■■■□□ 2.12
CHFR-218ENST00000540963 GRIK2Q13002 908 aa28.27■■■□□ 2.12
CHFR-218ENST00000540963 STK38Q15208 465 aa28.27■■■□□ 2.12
CHFR-218ENST00000540963 E2F5Q15329 346 aa28.27■■■□□ 2.12
CHFR-218ENST00000540963 KNOP1Q1ED39 458 aaKnown RBP28.27■■■□□ 2.12
CHFR-218ENST00000540963 CCNI2Q6ZMN8 369 aaPredicted RBP28.27■■■□□ 2.12
CHFR-218ENST00000540963 TPGS1Q6ZTW0 290 aa28.27■■■□□ 2.12
CHFR-218ENST00000540963 SLC2A14Q8TDB8 520 aa28.27■■■□□ 2.12
CHFR-218ENST00000540963 TMEM174Q8WUU8 243 aa28.27■■■□□ 2.12
CHFR-218ENST00000540963 DHX58Q96C10 678 aa28.27■■■□□ 2.12
CHFR-218ENST00000540963 SDCBP2Q9H190 292 aa28.27■■■□□ 2.12
CHFR-218ENST00000540963 CACNA2D2Q9NY47 1150 aa28.27■■■□□ 2.12
CHFR-218ENST00000540963 SLC27A6Q9Y2P4 619 aa28.27■■■□□ 2.12
CHFR-218ENST00000540963 TBX18O95935 607 aa28.26■■■□□ 2.11
CHFR-218ENST00000540963 ZNF883P0CG24 379 aa28.26■■■□□ 2.11
CHFR-218ENST00000540963 PLA2G4AP47712 749 aa28.26■■■□□ 2.11
CHFR-218ENST00000540963 STARD3Q14849 445 aa28.26■■■□□ 2.11
CHFR-218ENST00000540963 SGSM1Q2NKQ1 1148 aa28.26■■■□□ 2.11
CHFR-218ENST00000540963 KIAA1324Q6UXG2 1013 aaKnown RBP28.26■■■□□ 2.11
CHFR-218ENST00000540963 Q6ZNB5 142 aa28.26■■■□□ 2.11
CHFR-218ENST00000540963 ZNF276Q8N554 614 aa28.26■■■□□ 2.11
CHFR-218ENST00000540963 TAF4BQ92750 862 aa28.26■■■□□ 2.11
CHFR-218ENST00000540963 PNPLA8Q9NP80 782 aa28.26■■■□□ 2.11
CHFR-218ENST00000540963 WSB2Q9NYS7 404 aaPredicted RBP28.26■■■□□ 2.11
CHFR-218ENST00000540963 KIAA1522Q9P206 1035 aaPredicted RBP28.26■■■□□ 2.11
CHFR-218ENST00000540963 USP36Q9P275 1121 aaKnown RBP28.26■■■□□ 2.11
CHFR-218ENST00000540963 MTMR6Q9Y217 621 aa28.26■■■□□ 2.11
CHFR-218ENST00000540963 PCDHA5Q9Y5H7 936 aa28.26■■■□□ 2.11
CHFR-218ENST00000540963 RAD54BQ9Y620 910 aa28.26■■■□□ 2.11
CHFR-218ENST00000540963 PTPRBP23467 1997 aa28.25■■■□□ 2.11
CHFR-218ENST00000540963 SPTLC2O15270 562 aa28.25■■■□□ 2.11
CHFR-218ENST00000540963 RPN1P04843 607 aaKnown RBP28.25■■■□□ 2.11
CHFR-218ENST00000540963 CCDC130P13994 396 aa28.25■■■□□ 2.11
CHFR-218ENST00000540963 CASP4P49662 377 aa28.25■■■□□ 2.11
CHFR-218ENST00000540963 MAP3K7CLP57077 242 aa28.25■■■□□ 2.11
CHFR-218ENST00000540963 ENPP2Q13822 863 aa28.25■■■□□ 2.11
CHFR-218ENST00000540963 PLEKHO2Q8TD55 490 aa28.25■■■□□ 2.11
CHFR-218ENST00000540963 INTS4Q96HW7 963 aaKnown RBP28.25■■■□□ 2.11
CHFR-218ENST00000540963 PRDM16Q9HAZ2 1276 aa28.25■■■□□ 2.11
CHFR-218ENST00000540963 CD93Q9NPY3 652 aa28.25■■■□□ 2.11
CHFR-218ENST00000540963 ITM2CQ9NQX7 267 aa28.25■■■□□ 2.11
CHFR-218ENST00000540963 DNMT3LQ9UJW3 386 aa28.25■■■□□ 2.11
CHFR-218ENST00000540963 STON1Q9Y6Q2 735 aa28.25■■■□□ 2.11
CHFR-218ENST00000540963 LAMA5O15230 3695 aa28.25■■■□□ 2.11
CHFR-218ENST00000540963 PVALEFA0A1B0GWK0 134 aa28.24■■■□□ 2.11
CHFR-218ENST00000540963 LRRIQ3A6PVS8 624 aaPredicted RBP28.24■■■□□ 2.11
CHFR-218ENST00000540963 CBFA2T3O75081 653 aa28.24■■■□□ 2.11
CHFR-218ENST00000540963 FAM200BP0CF97 657 aa28.24■■■□□ 2.11
CHFR-218ENST00000540963 PSEN1P49768 467 aa28.24■■■□□ 2.11
CHFR-218ENST00000540963 SCARA5Q6ZMJ2 495 aa28.24■■■□□ 2.11
CHFR-218ENST00000540963 TADA2BQ86TJ2 420 aa28.24■■■□□ 2.11
CHFR-218ENST00000540963 CCDC86Q9H6F5 360 aaKnown RBP28.24■■■□□ 2.11
CHFR-218ENST00000540963 OSER1Q9NX31 292 aa28.24■■■□□ 2.11
CHFR-218ENST00000540963 ZNF510Q9Y2H8 683 aa28.24■■■□□ 2.11
CHFR-218ENST00000540963 CLSTN1O94985 981 aa28.23■■■□□ 2.11
CHFR-218ENST00000540963 VNN1O95497 513 aa28.23■■■□□ 2.11
CHFR-218ENST00000540963 OXTRP30559 389 aa28.23■■■□□ 2.11
CHFR-218ENST00000540963 NDST1P52848 882 aa28.23■■■□□ 2.11
CHFR-218ENST00000540963 FUT11Q495W5 492 aa28.23■■■□□ 2.11
CHFR-218ENST00000540963 TOE1Q96GM8 510 aaKnown RBP28.23■■■□□ 2.11
CHFR-218ENST00000540963 HNRNPABQ99729 332 aaKnown RBP28.23■■■□□ 2.11
CHFR-218ENST00000540963 SLC6A17Q9H1V8 727 aa28.23■■■□□ 2.11
CHFR-218ENST00000540963 MTPAPQ9NVV4 582 aaKnown RBP eCLIP28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms