RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 TCF4P15884 667 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 NNMTP40261 264 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 KDSRQ06136 332 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 MCL1Q07820 350 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 DUSP4Q13115 394 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 NUP188Q5SRE5 1749 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 TSHZ1Q6ZSZ6 1077 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 RP1L1Q8IWN7 2480 aaPredicted RBP9.88□□□□□ -0.83
TTC39C-203ENST00000540918 PPFIBP2Q8ND30 876 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 MYLPFQ96A32 169 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 STAMBPL1Q96FJ0 436 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 EGFL8Q99944 293 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 TRIM55Q9BYV6 548 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 DMAP1Q9NPF5 467 aaPredicted RBP9.88□□□□□ -0.83
TTC39C-203ENST00000540918 IL1RAPL1Q9NZN1 696 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 LOC100653049A0A140TA62 436 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 GMNNO75496 209 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 KRT34O76011 436 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 NPR3P17342 541 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 PAMP19021 973 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 OR1D2P34982 312 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 VCPP55072 806 aaKnown RBP9.88□□□□□ -0.83
TTC39C-203ENST00000540918 MARSP56192 900 aaKnown RBP9.88□□□□□ -0.83
TTC39C-203ENST00000540918 RTP1P59025 263 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 MAXP61244 160 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 RBBP5Q15291 538 aaKnown RBP9.88□□□□□ -0.83
TTC39C-203ENST00000540918 MAPRE1Q15691 268 aaKnown RBP9.88□□□□□ -0.83
TTC39C-203ENST00000540918 CCNG2Q16589 344 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 ILDR2Q71H61 639 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 PYROXD2Q8N2H3 581 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 KIF2BQ8N4N8 673 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 TASP1Q9H6P5 420 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 CHST12Q9NRB3 414 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 OR12D3Q9UGF7 316 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 SPEF2Q9C093 1822 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 TRIM66O15016 1216 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 CA12O43570 354 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 KPNA6O60684 536 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 CHRNB2P17787 502 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 TPD52P55327 224 aaPredicted RBP9.87□□□□□ -0.83
TTC39C-203ENST00000540918 AMPD2Q01433 879 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 CENPCQ03188 943 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 NOMO2Q5JPE7 1267 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 SMARCD1Q96GM5 515 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 ELMO2Q96JJ3 720 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 HIPK3Q9H422 1215 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 UTP6Q9NYH9 597 aaKnown RBP9.87□□□□□ -0.83
TTC39C-203ENST00000540918 PCDHB5Q9Y5E4 795 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 BTAF1O14981 1849 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 VGLL3A8MV65 326 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 MAPK13O15264 365 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 DNAJC6O75061 913 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 DUSP11O75319 330 aaKnown RBP9.87□□□□□ -0.83
TTC39C-203ENST00000540918 PAEPP09466 180 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 KLRC2P26717 231 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 OR1E1P30953 314 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 STIP1P31948 543 aaKnown RBP9.87□□□□□ -0.83
TTC39C-203ENST00000540918 HSPA9P38646 679 aaKnown RBP9.87□□□□□ -0.83
TTC39C-203ENST00000540918 GRM5P41594 1212 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 ALDH18A1P54886 795 aaKnown RBP9.87□□□□□ -0.83
TTC39C-203ENST00000540918 WNT7BP56706 349 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 NFE2Q16621 373 aaPredicted RBP9.87□□□□□ -0.83
TTC39C-203ENST00000540918 SH2D4BQ5SQS7 431 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 TRMT10CQ7L0Y3 403 aaKnown RBP9.87□□□□□ -0.83
TTC39C-203ENST00000540918 PTAR1Q7Z6K3 402 aaPredicted RBP9.87□□□□□ -0.83
TTC39C-203ENST00000540918 CFAP52Q8N1V2 620 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 VPS28Q9UK41 221 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 SLC8A2Q9UPR5 921 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 SHOC2Q9UQ13 582 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 ZMYM2Q9UBW7 1377 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 NCF1BA6NI72 391 aaPredicted RBP9.87□□□□□ -0.83
TTC39C-203ENST00000540918 NCF1CA8MVU1 366 aaPredicted RBP9.87□□□□□ -0.83
TTC39C-203ENST00000540918 SETSIPP0DME0 302 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 NCF1P14598 390 aaPredicted RBP9.87□□□□□ -0.83
TTC39C-203ENST00000540918 CYP2C18P33260 490 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 CHKAP35790 457 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 RAD23BP54727 409 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 RAP1GAP2Q684P5 730 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 TXNRD3NBQ6F5E7 133 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 LRRC6Q86X45 466 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.87□□□□□ -0.83
TTC39C-203ENST00000540918 CATSPERBQ9H7T0 1116 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 ETNK1Q9HBU6 452 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 CYP4F12Q9HCS2 524 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 LATS2Q9NRM7 1088 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 TRPM5Q9NZQ8 1165 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 LSM7Q9UK45 103 aaKnown RBP9.87□□□□□ -0.83
TTC39C-203ENST00000540918 RPTORQ8N122 1335 aa9.87□□□□□ -0.83
TTC39C-203ENST00000540918 EP400Q96L91 3159 aa9.86□□□□□ -0.83
TTC39C-203ENST00000540918 SIGLEC16A6NMB1 481 aa9.86□□□□□ -0.83
TTC39C-203ENST00000540918 MEIS3P2A8K0S8 358 aa9.86□□□□□ -0.83
TTC39C-203ENST00000540918 ASMTLO95671 621 aa9.86□□□□□ -0.83
TTC39C-203ENST00000540918 SYF2O95926 243 aaKnown RBP9.86□□□□□ -0.83
TTC39C-203ENST00000540918 SKIP12755 728 aa9.86□□□□□ -0.83
TTC39C-203ENST00000540918 GFAPP14136 432 aa9.86□□□□□ -0.83
TTC39C-203ENST00000540918 MMP8P22894 467 aa9.86□□□□□ -0.83
TTC39C-203ENST00000540918 YWHAQP27348 245 aa9.86□□□□□ -0.83
TTC39C-203ENST00000540918 LILRA4P59901 499 aa9.86□□□□□ -0.83
TTC39C-203ENST00000540918 ZRANB3Q5FWF4 1079 aa9.86□□□□□ -0.83
TTC39C-203ENST00000540918 GDF6Q6KF10 455 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms