RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 MIB1Q86YT6 1006 aa14.89□□□□□ -0.03
SNHG1-213ENST00000540725 GUF1Q8N442 669 aaKnown RBP14.89□□□□□ -0.03
SNHG1-213ENST00000540725 XPO6Q96QU8 1125 aaKnown RBP14.89□□□□□ -0.03
SNHG1-213ENST00000540725 BBS2Q9BXC9 721 aa14.89□□□□□ -0.03
SNHG1-213ENST00000540725 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.89□□□□□ -0.03
SNHG1-213ENST00000540725 MARK1Q9P0L2 795 aa14.89□□□□□ -0.03
SNHG1-213ENST00000540725 EVLQ9UI08 416 aaPredicted RBP14.89□□□□□ -0.03
SNHG1-213ENST00000540725 NUDT5Q9UKK9 219 aa14.89□□□□□ -0.03
SNHG1-213ENST00000540725 ZDHHC9Q9Y397 364 aa14.89□□□□□ -0.03
SNHG1-213ENST00000540725 STARD13Q9Y3M8 1113 aa14.89□□□□□ -0.03
SNHG1-213ENST00000540725 CDX4O14627 284 aaPredicted RBP14.88□□□□□ -0.03
SNHG1-213ENST00000540725 GIPC1O14908 333 aa14.88□□□□□ -0.03
SNHG1-213ENST00000540725 RARGP13631 454 aa14.88□□□□□ -0.03
SNHG1-213ENST00000540725 GABRG2P18507 467 aa14.88□□□□□ -0.03
SNHG1-213ENST00000540725 RPL13P26373 211 aaKnown RBP14.88□□□□□ -0.03
SNHG1-213ENST00000540725 NTSR1P30989 418 aa14.88□□□□□ -0.03
SNHG1-213ENST00000540725 PSMC2P35998 433 aaKnown RBP14.88□□□□□ -0.03
SNHG1-213ENST00000540725 KIF11P52732 1056 aa14.88□□□□□ -0.03
SNHG1-213ENST00000540725 ENPEPQ07075 957 aa14.88□□□□□ -0.03
SNHG1-213ENST00000540725 TRIM61Q5EBN2 209 aa14.88□□□□□ -0.03
SNHG1-213ENST00000540725 C10orf120Q5SQS8 335 aa14.88□□□□□ -0.03
SNHG1-213ENST00000540725 EGFLAMQ63HQ2 1017 aa14.88□□□□□ -0.03
SNHG1-213ENST00000540725 KLHDC10Q6PID8 442 aa14.88□□□□□ -0.03
SNHG1-213ENST00000540725 KRBA2Q6ZNG9 492 aa14.88□□□□□ -0.03
SNHG1-213ENST00000540725 TPGS1Q6ZTW0 290 aa14.88□□□□□ -0.03
SNHG1-213ENST00000540725 SYT12Q8IV01 421 aa14.88□□□□□ -0.03
SNHG1-213ENST00000540725 CCDC150Q8NCX0 1101 aa14.88□□□□□ -0.03
SNHG1-213ENST00000540725 TMEM8AQ9HCN3 771 aa14.88□□□□□ -0.03
SNHG1-213ENST00000540725 WDR35Q9P2L0 1181 aa14.88□□□□□ -0.03
SNHG1-213ENST00000540725 DNMT3LQ9UJW3 386 aa14.88□□□□□ -0.03
SNHG1-213ENST00000540725 NAGPAQ9UK23 515 aa14.88□□□□□ -0.03
SNHG1-213ENST00000540725 CFAP47Q6ZTR5 3102 aa14.88□□□□□ -0.03
SNHG1-213ENST00000540725 ATXN2Q99700 1313 aaKnown RBP14.87□□□□□ -0.03
SNHG1-213ENST00000540725 AKAP13Q12802 2813 aa14.87□□□□□ -0.03
SNHG1-213ENST00000540725 PLA2G4AP47712 749 aa14.87□□□□□ -0.03
SNHG1-213ENST00000540725 ADAM9Q13443 819 aa14.87□□□□□ -0.03
SNHG1-213ENST00000540725 SPDYCQ5MJ68 293 aa14.87□□□□□ -0.03
SNHG1-213ENST00000540725 PPP1R26Q5T8A7 1209 aaPredicted RBP14.87□□□□□ -0.03
SNHG1-213ENST00000540725 SH3PXD2AQ5TCZ1 1133 aa14.87□□□□□ -0.03
SNHG1-213ENST00000540725 LYSMD4Q5XG99 296 aa14.87□□□□□ -0.03
SNHG1-213ENST00000540725 Q6ZNB5 142 aa14.87□□□□□ -0.03
SNHG1-213ENST00000540725 CCDC186Q7Z3E2 898 aa14.87□□□□□ -0.03
SNHG1-213ENST00000540725 SCD5Q86SK9 330 aa14.87□□□□□ -0.03
SNHG1-213ENST00000540725 CHPFQ8IZ52 775 aa14.87□□□□□ -0.03
SNHG1-213ENST00000540725 ACOX2Q99424 681 aa14.87□□□□□ -0.03
SNHG1-213ENST00000540725 NUSAP1Q9BXS6 441 aaKnown RBP14.87□□□□□ -0.03
SNHG1-213ENST00000540725 DUSP16Q9BY84 665 aa14.87□□□□□ -0.03
SNHG1-213ENST00000540725 DNAI2Q9GZS0 605 aa14.87□□□□□ -0.03
SNHG1-213ENST00000540725 TMEM74BQ9NUR3 256 aa14.87□□□□□ -0.03
SNHG1-213ENST00000540725 CALCOCO1Q9P1Z2 691 aa14.87□□□□□ -0.03
SNHG1-213ENST00000540725 FAM208BQ5VWN6 2430 aa14.87□□□□□ -0.03
SNHG1-213ENST00000540725 KNL1Q8NG31 2342 aa14.87□□□□□ -0.03
SNHG1-213ENST00000540725 A0A1W2PQ27 194 aa14.86□□□□□ -0.03
SNHG1-213ENST00000540725 A0A1W2PQ64 194 aa14.86□□□□□ -0.03
SNHG1-213ENST00000540725 A0A1W2PQD8 194 aa14.86□□□□□ -0.03
SNHG1-213ENST00000540725 A0A1W2PQF6 199 aa14.86□□□□□ -0.03
SNHG1-213ENST00000540725 PRRT4C9JH25 899 aa14.86□□□□□ -0.03
SNHG1-213ENST00000540725 AP5Z1O43299 807 aa14.86□□□□□ -0.03
SNHG1-213ENST00000540725 STC2O76061 302 aa14.86□□□□□ -0.03
SNHG1-213ENST00000540725 GTF2H1P32780 548 aa14.86□□□□□ -0.03
SNHG1-213ENST00000540725 DPP6P42658 865 aa14.86□□□□□ -0.03
SNHG1-213ENST00000540725 DGKGP49619 791 aa14.86□□□□□ -0.03
SNHG1-213ENST00000540725 PSEN1P49768 467 aa14.86□□□□□ -0.03
SNHG1-213ENST00000540725 ZNF252P-AS1Q0IIN9 211 aa14.86□□□□□ -0.03
SNHG1-213ENST00000540725 LMAN2Q12907 356 aa14.86□□□□□ -0.03
SNHG1-213ENST00000540725 UAP1L1Q3KQV9 507 aa14.86□□□□□ -0.03
SNHG1-213ENST00000540725 ZCWPW2Q504Y3 356 aa14.86□□□□□ -0.03
SNHG1-213ENST00000540725 ZNF394Q53GI3 561 aa14.86□□□□□ -0.03
SNHG1-213ENST00000540725 KRT39Q6A163 491 aa14.86□□□□□ -0.03
SNHG1-213ENST00000540725 SDE2Q6IQ49 451 aa14.86□□□□□ -0.03
SNHG1-213ENST00000540725 TOGARAM2Q6ZUX3 1019 aa14.86□□□□□ -0.03
SNHG1-213ENST00000540725 TADA2BQ86TJ2 420 aa14.86□□□□□ -0.03
SNHG1-213ENST00000540725 BHMTQ93088 406 aa14.86□□□□□ -0.03
SNHG1-213ENST00000540725 SCAND2PQ9GZW5 306 aaPredicted RBP14.86□□□□□ -0.03
SNHG1-213ENST00000540725 GOLPH3LQ9H4A5 285 aa14.86□□□□□ -0.03
SNHG1-213ENST00000540725 USP3Q9Y6I4 520 aa14.86□□□□□ -0.03
SNHG1-213ENST00000540725 CKAP5Q14008 2032 aa14.86□□□□□ -0.03
SNHG1-213ENST00000540725 PCDH15Q96QU1 1955 aa14.86□□□□□ -0.03
SNHG1-213ENST00000540725 ZBTB24O43167 697 aaPredicted RBP14.85□□□□□ -0.03
SNHG1-213ENST00000540725 RALAP11233 206 aa14.85□□□□□ -0.03
SNHG1-213ENST00000540725 NDUFV2P19404 249 aa14.85□□□□□ -0.03
SNHG1-213ENST00000540725 CSRP1P21291 193 aaKnown RBP14.85□□□□□ -0.03
SNHG1-213ENST00000540725 ITPKAP23677 461 aa14.85□□□□□ -0.03
SNHG1-213ENST00000540725 MXI1P50539 228 aa14.85□□□□□ -0.03
SNHG1-213ENST00000540725 RPL6Q02878 288 aaKnown RBP14.85□□□□□ -0.03
SNHG1-213ENST00000540725 PEAR1Q5VY43 1037 aaPredicted RBP14.85□□□□□ -0.03
SNHG1-213ENST00000540725 KIAA1211LQ6NV74 962 aa14.85□□□□□ -0.03
SNHG1-213ENST00000540725 SLC36A4Q6YBV0 504 aa14.85□□□□□ -0.03
SNHG1-213ENST00000540725 ZNF276Q8N554 614 aa14.85□□□□□ -0.03
SNHG1-213ENST00000540725 IPO4Q8TEX9 1081 aaKnown RBP14.85□□□□□ -0.03
SNHG1-213ENST00000540725 SEMA4DQ92854 862 aa14.85□□□□□ -0.03
SNHG1-213ENST00000540725 ERLEC1Q96DZ1 483 aa14.85□□□□□ -0.03
SNHG1-213ENST00000540725 HEXIM2Q96MH2 286 aaKnown RBP14.85□□□□□ -0.03
SNHG1-213ENST00000540725 GABRG3Q99928 467 aa14.85□□□□□ -0.03
SNHG1-213ENST00000540725 CD248Q9HCU0 757 aa14.85□□□□□ -0.03
SNHG1-213ENST00000540725 PLK2Q9NYY3 685 aa14.85□□□□□ -0.03
SNHG1-213ENST00000540725 CLIC5Q9NZA1 410 aa14.85□□□□□ -0.03
SNHG1-213ENST00000540725 PILRBQ9UKJ0 227 aa14.85□□□□□ -0.03
SNHG1-213ENST00000540725 GTF3C3Q9Y5Q9 886 aa14.85□□□□□ -0.03
SNHG1-213ENST00000540725 IGHV1OR15-9A0A0B4J2B8 117 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms