RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 DHX40Q8IX18 779 aaKnown RBP14.03□□□□□ -0.16
CCDC130-202ENST00000540216 CCDC26Q8TAB7 109 aa14.03□□□□□ -0.16
CCDC130-202ENST00000540216 RNF139Q8WU17 664 aa14.03□□□□□ -0.16
CCDC130-202ENST00000540216 CD101Q93033 1021 aa14.03□□□□□ -0.16
CCDC130-202ENST00000540216 CHFRQ96EP1 664 aa14.03□□□□□ -0.16
CCDC130-202ENST00000540216 NOX5Q96PH1 765 aa14.03□□□□□ -0.16
CCDC130-202ENST00000540216 ERGIC2Q96RQ1 377 aa14.03□□□□□ -0.16
CCDC130-202ENST00000540216 SLC4A5Q9BY07 1137 aa14.03□□□□□ -0.16
CCDC130-202ENST00000540216 DCLK3Q9C098 648 aa14.03□□□□□ -0.16
CCDC130-202ENST00000540216 GANQ9H2C0 597 aa14.03□□□□□ -0.16
CCDC130-202ENST00000540216 ACP6Q9NPH0 428 aa14.03□□□□□ -0.16
CCDC130-202ENST00000540216 ST7Q9NRC1 585 aa14.03□□□□□ -0.16
CCDC130-202ENST00000540216 RASAL2Q9UJF2 1139 aa14.03□□□□□ -0.16
CCDC130-202ENST00000540216 NUDT5Q9UKK9 219 aa14.03□□□□□ -0.16
CCDC130-202ENST00000540216 FBXO4Q9UKT5 387 aa14.03□□□□□ -0.16
CCDC130-202ENST00000540216 SIK3Q9Y2K2 1263 aa14.03□□□□□ -0.16
CCDC130-202ENST00000540216 CEP83Q9Y592 693 aa14.03□□□□□ -0.16
CCDC130-202ENST00000540216 MDM4O15151 490 aa14.02□□□□□ -0.17
CCDC130-202ENST00000540216 LAMTOR5O43504 91 aa14.02□□□□□ -0.17
CCDC130-202ENST00000540216 GREM1O60565 184 aa14.02□□□□□ -0.17
CCDC130-202ENST00000540216 STC2O76061 302 aa14.02□□□□□ -0.17
CCDC130-202ENST00000540216 LTFP02788 710 aa14.02□□□□□ -0.17
CCDC130-202ENST00000540216 ADH5P11766 374 aa14.02□□□□□ -0.17
CCDC130-202ENST00000540216 UBXN1Q04323 297 aa14.02□□□□□ -0.17
CCDC130-202ENST00000540216 GAD2Q05329 585 aa14.02□□□□□ -0.17
CCDC130-202ENST00000540216 PDCLQ13371 301 aa14.02□□□□□ -0.17
CCDC130-202ENST00000540216 PPP2R5DQ14738 602 aa14.02□□□□□ -0.17
CCDC130-202ENST00000540216 FSTL4Q6MZW2 842 aa14.02□□□□□ -0.17
CCDC130-202ENST00000540216 MSANTD2Q6P1R3 559 aa14.02□□□□□ -0.17
CCDC130-202ENST00000540216 Q6ZNB5 142 aa14.02□□□□□ -0.17
CCDC130-202ENST00000540216 BEND5Q7L4P6 421 aa14.02□□□□□ -0.17
CCDC130-202ENST00000540216 APTXQ7Z2E3 356 aaKnown RBP14.02□□□□□ -0.17
CCDC130-202ENST00000540216 TMEM110Q86TL2 294 aa14.02□□□□□ -0.17
CCDC130-202ENST00000540216 SLC47A2Q86VL8 602 aa14.02□□□□□ -0.17
CCDC130-202ENST00000540216 NDRG1Q92597 394 aaKnown RBP14.02□□□□□ -0.17
CCDC130-202ENST00000540216 PLD4Q96BZ4 506 aa14.02□□□□□ -0.17
CCDC130-202ENST00000540216 FAM122AQ96E09 287 aa14.02□□□□□ -0.17
CCDC130-202ENST00000540216 FAM207AQ9NSI2 230 aaPredicted RBP14.02□□□□□ -0.17
CCDC130-202ENST00000540216 HBS1LQ9Y450 684 aaKnown RBP14.02□□□□□ -0.17
CCDC130-202ENST00000540216 H0Y858 1186 aa14.01□□□□□ -0.17
CCDC130-202ENST00000540216 SCAMP3O14828 347 aaKnown RBP14.01□□□□□ -0.17
CCDC130-202ENST00000540216 HOXC11O43248 304 aaPredicted RBP14.01□□□□□ -0.17
CCDC130-202ENST00000540216 PNMA6AP0CW24 399 aaPredicted RBP14.01□□□□□ -0.17
CCDC130-202ENST00000540216 ATP1A3P13637 1013 aa14.01□□□□□ -0.17
CCDC130-202ENST00000540216 CYP11B1P15538 503 aa14.01□□□□□ -0.17
CCDC130-202ENST00000540216 GALK1P51570 392 aa14.01□□□□□ -0.17
CCDC130-202ENST00000540216 CCR3P51677 355 aa14.01□□□□□ -0.17
CCDC130-202ENST00000540216 MTAPQ13126 283 aa14.01□□□□□ -0.17
CCDC130-202ENST00000540216 SYCP1Q15431 976 aa14.01□□□□□ -0.17
CCDC130-202ENST00000540216 GAB4Q2WGN9 574 aa14.01□□□□□ -0.17
CCDC130-202ENST00000540216 PREPLQ4J6C6 727 aaPredicted RBP14.01□□□□□ -0.17
CCDC130-202ENST00000540216 LY6G5CQ5SRR4 150 aa14.01□□□□□ -0.17
CCDC130-202ENST00000540216 RHBDF2Q6PJF5 856 aa14.01□□□□□ -0.17
CCDC130-202ENST00000540216 SPEM1Q8N4L4 309 aa14.01□□□□□ -0.17
CCDC130-202ENST00000540216 NEK11Q8NG66 645 aa14.01□□□□□ -0.17
CCDC130-202ENST00000540216 ATOH1Q92858 354 aaPredicted RBP14.01□□□□□ -0.17
CCDC130-202ENST00000540216 WBP2Q969T9 261 aa14.01□□□□□ -0.17
CCDC130-202ENST00000540216 MIS12Q9H081 205 aa14.01□□□□□ -0.17
CCDC130-202ENST00000540216 PRMT8Q9NR22 394 aaPredicted RBP14.01□□□□□ -0.17
CCDC130-202ENST00000540216 SPHK2Q9NRA0 654 aa14.01□□□□□ -0.17
CCDC130-202ENST00000540216 SLC12A8A0AV02 714 aa14□□□□□ -0.17
CCDC130-202ENST00000540216 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14□□□□□ -0.17
CCDC130-202ENST00000540216 E5RJQ4 531 aa14□□□□□ -0.17
CCDC130-202ENST00000540216 PIK3R2O00459 728 aa14□□□□□ -0.17
CCDC130-202ENST00000540216 ATG13O75143 517 aa14□□□□□ -0.17
CCDC130-202ENST00000540216 LSM8O95777 96 aaKnown RBP14□□□□□ -0.17
CCDC130-202ENST00000540216 CDH5P33151 784 aaPredicted RBP14□□□□□ -0.17
CCDC130-202ENST00000540216 CHKAP35790 457 aa14□□□□□ -0.17
CCDC130-202ENST00000540216 OPRD1P41143 372 aa14□□□□□ -0.17
CCDC130-202ENST00000540216 KLK7P49862 253 aa14□□□□□ -0.17
CCDC130-202ENST00000540216 POLR2FP61218 127 aaKnown RBP14□□□□□ -0.17
CCDC130-202ENST00000540216 TPM4P67936 248 aa14□□□□□ -0.17
CCDC130-202ENST00000540216 IQCB1Q15051 598 aa14□□□□□ -0.17
CCDC130-202ENST00000540216 TRIP4Q15650 581 aaPredicted RBP14□□□□□ -0.17
CCDC130-202ENST00000540216 ZNF528Q3MIS6 628 aa14□□□□□ -0.17
CCDC130-202ENST00000540216 ZSCAN23Q3MJ62 389 aa14□□□□□ -0.17
CCDC130-202ENST00000540216 FILIP1LQ4L180 1135 aa14□□□□□ -0.17
CCDC130-202ENST00000540216 ZNF677Q86XU0 584 aa14□□□□□ -0.17
CCDC130-202ENST00000540216 FMNL3Q8IVF7 1028 aa14□□□□□ -0.17
CCDC130-202ENST00000540216 SCUBE3Q8IX30 993 aa14□□□□□ -0.17
CCDC130-202ENST00000540216 TMEM35BQ8NCS4 154 aa14□□□□□ -0.17
CCDC130-202ENST00000540216 IPO4Q8TEX9 1081 aaKnown RBP14□□□□□ -0.17
CCDC130-202ENST00000540216 CLEC4CQ8WTT0 213 aa14□□□□□ -0.17
CCDC130-202ENST00000540216 EDEM1Q92611 657 aa14□□□□□ -0.17
CCDC130-202ENST00000540216 FAM149B1Q96BN6 582 aa14□□□□□ -0.17
CCDC130-202ENST00000540216 PPP1R13BQ96KQ4 1090 aa14□□□□□ -0.17
CCDC130-202ENST00000540216 PCMTD1Q96MG8 357 aaPredicted RBP14□□□□□ -0.17
CCDC130-202ENST00000540216 SPAG5Q96R06 1193 aa14□□□□□ -0.17
CCDC130-202ENST00000540216 RBM12Q9NTZ6 932 aaKnown RBP14□□□□□ -0.17
CCDC130-202ENST00000540216 MARK1Q9P0L2 795 aa14□□□□□ -0.17
CCDC130-202ENST00000540216 WDR35Q9P2L0 1181 aa14□□□□□ -0.17
CCDC130-202ENST00000540216 CYTH4Q9UIA0 394 aa14□□□□□ -0.17
CCDC130-202ENST00000540216 CACNA1IQ9P0X4 2223 aa14□□□□□ -0.17
CCDC130-202ENST00000540216 PAPSS1O43252 624 aaPredicted RBP13.99□□□□□ -0.17
CCDC130-202ENST00000540216 PAPSS2O95340 614 aaPredicted RBP13.99□□□□□ -0.17
CCDC130-202ENST00000540216 LATS1O95835 1130 aa13.99□□□□□ -0.17
CCDC130-202ENST00000540216 KLKB1P03952 638 aa13.99□□□□□ -0.17
CCDC130-202ENST00000540216 GLI1P08151 1106 aa13.99□□□□□ -0.17
CCDC130-202ENST00000540216 CORO1AP31146 461 aaKnown RBP13.99□□□□□ -0.17
CCDC130-202ENST00000540216 SOX5P35711 763 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms