RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 CACNA2D1P54289 1103 aa10.08□□□□□ -0.8
MDH1-215ENST00000539945 HDAC4P56524 1084 aa10.08□□□□□ -0.8
MDH1-215ENST00000539945 ATP11AP98196 1134 aa10.08□□□□□ -0.8
MDH1-215ENST00000539945 ADCY2Q08462 1091 aa10.08□□□□□ -0.8
MDH1-215ENST00000539945 IKBKEQ14164 716 aa10.08□□□□□ -0.8
MDH1-215ENST00000539945 PDK2Q15119 407 aa10.08□□□□□ -0.8
MDH1-215ENST00000539945 CDO1Q16878 200 aa10.08□□□□□ -0.8
MDH1-215ENST00000539945 SMTNL2Q2TAL5 461 aa10.08□□□□□ -0.8
MDH1-215ENST00000539945 SLC25A52Q3SY17 297 aa10.08□□□□□ -0.8
MDH1-215ENST00000539945 KCNT1Q5JUK3 1230 aa10.08□□□□□ -0.8
MDH1-215ENST00000539945 DRICH1Q6PGQ1 229 aaPredicted RBP10.08□□□□□ -0.8
MDH1-215ENST00000539945 C4orf50Q6ZRC1 276 aa10.08□□□□□ -0.8
MDH1-215ENST00000539945 STRADAQ7RTN6 431 aa10.08□□□□□ -0.8
MDH1-215ENST00000539945 VSIG1Q86XK7 387 aa10.08□□□□□ -0.8
MDH1-215ENST00000539945 SCML4Q8N228 414 aa10.08□□□□□ -0.8
MDH1-215ENST00000539945 ATL2Q8NHH9 583 aa10.08□□□□□ -0.8
MDH1-215ENST00000539945 GRK7Q8WTQ7 553 aa10.08□□□□□ -0.8
MDH1-215ENST00000539945 ATG4AQ8WYN0 398 aa10.08□□□□□ -0.8
MDH1-215ENST00000539945 NT5C3BQ969T7 300 aa10.08□□□□□ -0.8
MDH1-215ENST00000539945 ACSF2Q96CM8 615 aaPredicted RBP10.08□□□□□ -0.8
MDH1-215ENST00000539945 TRIM51Q9BSJ1 452 aa10.08□□□□□ -0.8
MDH1-215ENST00000539945 FRMD8P1Q9BZ68 369 aaPredicted RBP10.08□□□□□ -0.8
MDH1-215ENST00000539945 C11orf49Q9H6J7 331 aa10.08□□□□□ -0.8
MDH1-215ENST00000539945 PNPLA8Q9NP80 782 aa10.08□□□□□ -0.8
MDH1-215ENST00000539945 NGRNQ9NPE2 291 aaKnown RBP10.08□□□□□ -0.8
MDH1-215ENST00000539945 DMAP1Q9NPF5 467 aaPredicted RBP10.08□□□□□ -0.8
MDH1-215ENST00000539945 TMEM39AQ9NV64 488 aa10.08□□□□□ -0.8
MDH1-215ENST00000539945 TMEM30AQ9NV96 361 aa10.08□□□□□ -0.8
MDH1-215ENST00000539945 TMLHEQ9NVH6 421 aa10.08□□□□□ -0.8
MDH1-215ENST00000539945 ADAM28Q9UKQ2 775 aa10.08□□□□□ -0.8
MDH1-215ENST00000539945 ATP11BQ9Y2G3 1177 aa10.08□□□□□ -0.8
MDH1-215ENST00000539945 PRG3Q9Y2Y8 225 aaPredicted RBP10.08□□□□□ -0.8
MDH1-215ENST00000539945 CEP350Q5VT06 3117 aa10.08□□□□□ -0.8
MDH1-215ENST00000539945 ZNF487B1APH4 448 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 MDM4O15151 490 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 GAS8O95995 478 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 ZBED1O96006 694 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 BDNFP23560 247 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 NOS2P35228 1153 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 TNNT3P45378 269 aaPredicted RBP10.07□□□□□ -0.8
MDH1-215ENST00000539945 KCNJ1P48048 391 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 GATMP50440 423 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 DAOAP59103 153 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 LMNB2Q03252 620 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 SNX1Q13596 522 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 MRPL58Q14197 206 aaKnown RBP10.07□□□□□ -0.8
MDH1-215ENST00000539945 HLTFQ14527 1009 aaKnown RBP eCLIP10.07□□□□□ -0.8
MDH1-215ENST00000539945 RAB6CQ53S08 254 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 KAZNQ674X7 775 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 PM20D1Q6GTS8 502 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 CNKSR3Q6P9H4 555 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 BBS12Q6ZW61 710 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 SND1Q7KZF4 910 aaKnown RBP eCLIP10.07□□□□□ -0.81e-8■■■■■ 28
MDH1-215ENST00000539945 BNIPLQ7Z465 357 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 DEFB128Q7Z7B8 93 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 DDX42Q86XP3 938 aaKnown RBP eCLIP10.07□□□□□ -0.8
MDH1-215ENST00000539945 MAP7D3Q8IWC1 876 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 DCP1BQ8IZD4 617 aaKnown RBP10.07□□□□□ -0.8
MDH1-215ENST00000539945 DEFB106AQ8N104 65 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 FAM71BQ8TC56 605 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 IRGQQ8WZA9 623 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 HSPH1Q92598 858 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 NKD2Q969F2 451 aaPredicted RBP10.07□□□□□ -0.8
MDH1-215ENST00000539945 SLC2A13Q96QE2 648 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 TMEM209Q96SK2 561 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 ULBP1Q9BZM6 244 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 FAM129AQ9BZQ8 928 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 ZCWPW1Q9H0M4 648 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 RAB6CQ9H0N0 254 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 POPDC2Q9HBU9 364 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 OGFRQ9NZT2 677 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 DRG1Q9Y295 367 aaKnown RBP10.07□□□□□ -0.8
MDH1-215ENST00000539945 FAN1Q9Y2M0 1017 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 BRCA2P51587 3418 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 TBKBP1A7MCY6 615 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 LIASO43766 372 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 RRP9O43818 475 aaKnown RBP10.07□□□□□ -0.8
MDH1-215ENST00000539945 ZIC2O95409 532 aaPredicted RBP10.07□□□□□ -0.8
MDH1-215ENST00000539945 FAM153BP0C7A2 387 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 TFE3P19532 575 aaPredicted RBP10.07□□□□□ -0.8
MDH1-215ENST00000539945 FGFR3P22607 806 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 SLC11A1P49279 550 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 CDH6P55285 790 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 ELAVL2Q12926 359 aaKnown RBP10.07□□□□□ -0.8
MDH1-215ENST00000539945 BYSLQ13895 437 aaKnown RBP10.07□□□□□ -0.8
MDH1-215ENST00000539945 DPYSL3Q14195 570 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 NFE2Q16621 373 aaPredicted RBP10.07□□□□□ -0.8
MDH1-215ENST00000539945 FAM153CQ494X1 144 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 DCAF6Q58WW2 860 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 C6orf118Q5T5N4 469 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 ERMARDQ5T6L9 678 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 SCYL2Q6P3W7 929 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 GPRIN1Q7Z2K8 1008 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 SPATA2LQ8IUW3 424 aaPredicted RBP10.07□□□□□ -0.8
MDH1-215ENST00000539945 LRRC43Q8N309 656 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 MREGQ8N565 214 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 NDRG1Q92597 394 aaKnown RBP10.07□□□□□ -0.8
MDH1-215ENST00000539945 FAM149B1Q96BN6 582 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 VWCEQ96DN2 955 aa10.07□□□□□ -0.8
MDH1-215ENST00000539945 FUBP3Q96I24 572 aaKnown RBP eCLIP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 438.7 ms