RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 SLC1A1P43005 524 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 GSSP48637 474 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 SSTP61278 116 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 ITGA9Q13797 1035 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 SNX17Q15036 470 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 LIN52Q52LA3 116 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 ZBTB41Q5SVQ8 909 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 PADI6Q6TGC4 694 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 RAD9BQ6WBX8 426 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 FAM178BQ8IXR5 827 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 ZBED8Q8IZ13 594 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 PLEKHO2Q8TD55 490 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 ADAMTS19Q8TE59 1207 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 GAB3Q8WWW8 586 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 TIFAQ96CG3 184 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 INPP4AQ96PE3 977 aaPredicted RBP13.05□□□□□ -0.32
DDX55-206ENST00000539934 CCDC77Q9BR77 488 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 SPATC1LQ9H0A9 340 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 BCAS3Q9H6U6 928 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 ABI2Q9NYB9 513 aaPredicted RBP13.05□□□□□ -0.32
DDX55-206ENST00000539934 RWDD3Q9Y3V2 267 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 PCDHGA11Q9Y5H2 935 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.05□□□□□ -0.32
DDX55-206ENST00000539934 GOLGA8RI6L899 631 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 PDXKO00764 312 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 NCAM2O15394 837 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 ST8SIA5O15466 376 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 MAGEB3O15480 346 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 POP4O95707 220 aaKnown RBP13.05□□□□□ -0.32
DDX55-206ENST00000539934 ACRP10323 421 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 RPS2P15880 293 aaKnown RBP13.05□□□□□ -0.32
DDX55-206ENST00000539934 FECHP22830 423 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 NMT1P30419 496 aaKnown RBP13.05□□□□□ -0.32
DDX55-206ENST00000539934 HSPA9P38646 679 aaKnown RBP13.05□□□□□ -0.32
DDX55-206ENST00000539934 PPP2R2BQ00005 443 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 GUCY2DQ02846 1103 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 FPGSQ05932 587 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 GSTA3Q16772 222 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 BMT2Q1RMZ1 405 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 STXBP4Q6ZWJ1 553 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 SYTL1Q8IYJ3 562 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 CACNA2D3Q8IZS8 1091 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 LILRB4Q8NHJ6 448 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 IFT74Q96LB3 600 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 EPB41L1Q9H4G0 881 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 APOL1O14791 398 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 EIF3DO15371 548 aaKnown RBP eCLIP13.04□□□□□ -0.32
DDX55-206ENST00000539934 RARBP10826 455 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 VAV1P15498 845 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 SERPINB3P29508 390 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 YWHABP31946 246 aaKnown RBP13.04□□□□□ -0.32
DDX55-206ENST00000539934 VASPP50552 380 aaPredicted RBP13.04□□□□□ -0.32
DDX55-206ENST00000539934 ATP11AP98196 1134 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 FAPQ12884 760 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 ADGRE1Q14246 886 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 LEXMQ3ZCV2 418 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 SPDYAQ5MJ70 313 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 ODR4Q5SWX8 454 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 CLVS2Q5SYC1 327 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 SPOPLQ6IQ16 392 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 KLHL35Q6PF15 583 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 MAEAQ7L5Y9 396 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 TRMT1LQ7Z2T5 733 aaKnown RBP13.04□□□□□ -0.32
DDX55-206ENST00000539934 CACNA2D4Q7Z3S7 1137 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 NAT14Q8WUY8 206 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 IQCDQ96DY2 449 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 MMRN2Q9H8L6 949 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 CNTN3Q9P232 1028 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 FNIP2Q9P278 1114 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 MBD2Q9UBB5 411 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 FBXO40Q9UH90 709 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 DBR1Q9UK59 544 aaKnown RBP13.04□□□□□ -0.32
DDX55-206ENST00000539934 PCDHB13Q9Y5F0 798 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.04□□□□□ -0.32
DDX55-206ENST00000539934 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.04□□□□□ -0.32
DDX55-206ENST00000539934 A0A1W2PQ45 241 aaPredicted RBP13.04□□□□□ -0.32
DDX55-206ENST00000539934 A0A1W2PQY0 241 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 A6NCN8 305 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 EIF4E1BA6NMX2 242 aaKnown RBP13.04□□□□□ -0.32
DDX55-206ENST00000539934 ATMINO43313 823 aaPredicted RBP13.04□□□□□ -0.32
DDX55-206ENST00000539934 CCNE2O96020 404 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 ITGB3P05106 788 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 NQO1P15559 274 aaKnown RBP13.04□□□□□ -0.32
DDX55-206ENST00000539934 HOXD13P35453 343 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 SLC26A3P40879 764 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 ASMTP46597 345 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 RARRES1P49788 294 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 GNG11P61952 73 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 PSMC5P62195 406 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 FAAP100Q0VG06 881 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 KPNB1Q14974 876 aaKnown RBP13.04□□□□□ -0.32
DDX55-206ENST00000539934 ODF2Q5BJF6 829 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 FIGNQ5HY92 759 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 KIAA1841Q6NSI8 718 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 TRPM8Q7Z2W7 1104 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 LONP2Q86WA8 852 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 RIOX2Q8IUF8 465 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 ZC3H3Q8IXZ2 948 aaKnown RBP13.04□□□□□ -0.32
DDX55-206ENST00000539934 C4orf19Q8IY42 314 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 ELMOD1Q8N336 334 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms