RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 BRWD3Q6RI45 1802 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 PHIPQ8WWQ0 1821 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 SDR42E2A6NKP2 422 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 MDM4O15151 490 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 GCATO75600 419 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 SNUPNO95149 360 aaKnown RBP13.74□□□□□ -0.21
UBE3B-209ENST00000539584 PDGFRAP16234 1089 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 PSMC4P43686 418 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 NR2C2P49116 596 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 ATF7IP2Q5U623 682 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 TREML1Q86YW5 311 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 DTX3LQ8TDB6 740 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 PRR11Q96HE9 360 aaPredicted RBP13.74□□□□□ -0.21
UBE3B-209ENST00000539584 PRDM16Q9HAZ2 1276 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 ZDHHC7Q9NXF8 308 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 ARMCX1Q9P291 453 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 CPSF2Q9P2I0 782 aaKnown RBP13.74□□□□□ -0.21
UBE3B-209ENST00000539584 TNFSF13BQ9Y275 285 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 PCDHA11Q9Y5I1 949 aa13.74□□□□□ -0.21
UBE3B-209ENST00000539584 E5RJQ4 531 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 STAU1O95793 577 aaKnown RBP13.73□□□□□ -0.21
UBE3B-209ENST00000539584 GNAT1P11488 350 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 MLNP12872 115 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 PTPRAP18433 802 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 UBA1P22314 1058 aaKnown RBP13.73□□□□□ -0.21
UBE3B-209ENST00000539584 TUBP50607 506 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 TNFAIP2Q03169 654 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 HNRNPDQ14103 355 aaKnown RBP13.73□□□□□ -0.21
UBE3B-209ENST00000539584 HIC1Q14526 733 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 INSCQ1MX18 579 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 HSF5Q4G112 596 aaPredicted RBP13.73□□□□□ -0.21
UBE3B-209ENST00000539584 SCARA3Q6AZY7 606 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 MTHFD1LQ6UB35 978 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 METTL7BQ6UX53 244 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 RIPOR1Q6ZS17 1223 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 CYP4V2Q6ZWL3 525 aaPredicted RBP13.73□□□□□ -0.21
UBE3B-209ENST00000539584 NDUFAF2Q8N183 169 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 RNF149Q8NC42 400 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 STKLD1Q8NE28 680 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 PIP4K2CQ8TBX8 421 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 PIWIL2Q8TC59 973 aaKnown RBP13.73□□□□□ -0.21
UBE3B-209ENST00000539584 UCMAQ8WVF2 138 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 RILPQ96NA2 401 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 GBP5Q96PP8 586 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 PEBP4Q96S96 227 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 NFKBIZQ9BYH8 718 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 ASB7Q9H672 318 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 TJP2Q9UDY2 1190 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 SLC7A8Q9UHI5 535 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 C2CD2Q9Y426 696 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 DOCK5Q9H7D0 1870 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 COL4A5P29400 1685 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 TTLL13PA6NNM8 815 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 M0QYV0 167 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 APRTP07741 180 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 AMPD1P23109 780 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 EDNRBP24530 442 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 GRK2P25098 689 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 DYNC1I2Q13409 638 aaKnown RBP13.73□□□□□ -0.21
UBE3B-209ENST00000539584 TAF5Q15542 800 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 THEMIS2Q5TEJ8 643 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 C1orf146Q5VVC0 180 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 LCLAT1Q6UWP7 414 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 UNC5AQ6ZN44 842 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 ZDHHC17Q8IUH5 632 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 HACE1Q8IYU2 909 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 TAB3Q8N5C8 712 aaPredicted RBP13.73□□□□□ -0.21
UBE3B-209ENST00000539584 RXFP2Q8WXD0 754 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 CDKL2Q92772 493 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 FGD4Q96M96 766 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 PANX3Q96QZ0 392 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 ECSITQ9BQ95 431 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 THTPAQ9BU02 230 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 MOCS1Q9NZB8 636 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 DCDC2Q9UHG0 476 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 ITGA11Q9UKX5 1188 aa13.73□□□□□ -0.21
UBE3B-209ENST00000539584 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.73□□□□□ -0.21
UBE3B-209ENST00000539584 RLFQ13129 1914 aa13.72□□□□□ -0.21
UBE3B-209ENST00000539584 DOCK1Q14185 1865 aa13.72□□□□□ -0.21
UBE3B-209ENST00000539584 CXorf49A8MYA2 514 aaPredicted RBP13.72□□□□□ -0.21
UBE3B-209ENST00000539584 CCNT2O60583 730 aaKnown RBP13.72□□□□□ -0.21
UBE3B-209ENST00000539584 GLRA3O75311 464 aa13.72□□□□□ -0.21
UBE3B-209ENST00000539584 AVILO75366 819 aa13.72□□□□□ -0.21
UBE3B-209ENST00000539584 ZNF189O75820 626 aaPredicted RBP13.72□□□□□ -0.21
UBE3B-209ENST00000539584 ALDH1A2O94788 518 aa13.72□□□□□ -0.21
UBE3B-209ENST00000539584 KRT19P08727 400 aa13.72□□□□□ -0.21
UBE3B-209ENST00000539584 SETSIPP0DME0 302 aa13.72□□□□□ -0.21
UBE3B-209ENST00000539584 RBL1P28749 1068 aa13.72□□□□□ -0.21
UBE3B-209ENST00000539584 SLC26A2P50443 739 aa13.72□□□□□ -0.21
UBE3B-209ENST00000539584 POU5F1BQ06416 359 aa13.72□□□□□ -0.21
UBE3B-209ENST00000539584 INCA1Q0VD86 236 aa13.72□□□□□ -0.21
UBE3B-209ENST00000539584 MMRN1Q13201 1228 aa13.72□□□□□ -0.21
UBE3B-209ENST00000539584 NPNTQ6UXI9 565 aa13.72□□□□□ -0.21
UBE3B-209ENST00000539584 PLPPR4Q7Z2D5 763 aa13.72□□□□□ -0.21
UBE3B-209ENST00000539584 PPP1R14CQ8TAE6 165 aa13.72□□□□□ -0.21
UBE3B-209ENST00000539584 SIGLEC10Q96LC7 697 aa13.72□□□□□ -0.21
UBE3B-209ENST00000539584 NAT9Q9BTE0 207 aa13.72□□□□□ -0.21
UBE3B-209ENST00000539584 SLC13A1Q9BZW2 595 aa13.72□□□□□ -0.21
UBE3B-209ENST00000539584 SIX4Q9UIU6 781 aa13.72□□□□□ -0.21
UBE3B-209ENST00000539584 BARX2Q9UMQ3 279 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms