RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 USP29Q9HBJ7 922 aa21.05■□□□□ 0.96
TMEM260-203ENST00000539559 PIH1D1Q9NWS0 290 aaKnown RBP21.05■□□□□ 0.96
TMEM260-203ENST00000539559 HBS1LQ9Y450 684 aaKnown RBP21.05■□□□□ 0.96
TMEM260-203ENST00000539559 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.04■□□□□ 0.96
TMEM260-203ENST00000539559 GJB1P08034 283 aa21.04■□□□□ 0.96
TMEM260-203ENST00000539559 CFAP157Q5JU67 520 aa21.04■□□□□ 0.96
TMEM260-203ENST00000539559 SCYL2Q6P3W7 929 aa21.04■□□□□ 0.96
TMEM260-203ENST00000539559 CRLF3Q8IUI8 442 aa21.04■□□□□ 0.96
TMEM260-203ENST00000539559 C7orf26Q96N11 449 aa21.04■□□□□ 0.96
TMEM260-203ENST00000539559 E2F8A0AVK6 867 aa21.04■□□□□ 0.96
TMEM260-203ENST00000539559 KLF11O14901 512 aa21.04■□□□□ 0.96
TMEM260-203ENST00000539559 ADCY3O60266 1144 aa21.04■□□□□ 0.96
TMEM260-203ENST00000539559 RNF111Q6ZNA4 994 aa21.04■□□□□ 0.96
TMEM260-203ENST00000539559 RSPH3Q86UC2 560 aa21.04■□□□□ 0.96
TMEM260-203ENST00000539559 AP2B1P63010 937 aa21.03■□□□□ 0.96
TMEM260-203ENST00000539559 RASIP1Q5U651 963 aa21.03■□□□□ 0.96
TMEM260-203ENST00000539559 ATG16L1Q676U5 607 aa21.03■□□□□ 0.96
TMEM260-203ENST00000539559 UNC5AQ6ZN44 842 aa21.03■□□□□ 0.96
TMEM260-203ENST00000539559 DENND5BQ6ZUT9 1274 aa21.03■□□□□ 0.96
TMEM260-203ENST00000539559 LRRC71Q8N4P6 559 aa21.03■□□□□ 0.96
TMEM260-203ENST00000539559 RNF217Q8TC41 542 aa21.03■□□□□ 0.96
TMEM260-203ENST00000539559 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.03■□□□□ 0.96
TMEM260-203ENST00000539559 CYP4F11Q9HBI6 524 aa21.03■□□□□ 0.96
TMEM260-203ENST00000539559 SIRPGQ9P1W8 387 aa21.03■□□□□ 0.96
TMEM260-203ENST00000539559 HMGCRP04035 888 aa21.03■□□□□ 0.96
TMEM260-203ENST00000539559 GSTA2P09210 222 aa21.03■□□□□ 0.96
TMEM260-203ENST00000539559 OSBPP22059 807 aa21.03■□□□□ 0.96
TMEM260-203ENST00000539559 RPL10AP62906 217 aaKnown RBP21.03■□□□□ 0.96
TMEM260-203ENST00000539559 TRMT5Q32P41 509 aaKnown RBP21.03■□□□□ 0.96
TMEM260-203ENST00000539559 CYP4V2Q6ZWL3 525 aaPredicted RBP21.03■□□□□ 0.96
TMEM260-203ENST00000539559 ZNF778Q96MU6 729 aa21.03■□□□□ 0.96
TMEM260-203ENST00000539559 ADPGKQ9BRR6 497 aa21.03■□□□□ 0.96
TMEM260-203ENST00000539559 PPME1Q9Y570 386 aa21.03■□□□□ 0.96
TMEM260-203ENST00000539559 A0A088AWK7 358 aa21.02■□□□□ 0.96
TMEM260-203ENST00000539559 SPATA31C2B4DYI2 1134 aa21.02■□□□□ 0.96
TMEM260-203ENST00000539559 F8W8V4 182 aa21.02■□□□□ 0.96
TMEM260-203ENST00000539559 M0QYV0 167 aa21.02■□□□□ 0.96
TMEM260-203ENST00000539559 MAFGO15525 162 aa21.02■□□□□ 0.96
TMEM260-203ENST00000539559 HOXC6P09630 235 aa21.02■□□□□ 0.96
TMEM260-203ENST00000539559 GSTT1P30711 240 aa21.02■□□□□ 0.96
TMEM260-203ENST00000539559 STIP1P31948 543 aaKnown RBP21.02■□□□□ 0.96
TMEM260-203ENST00000539559 C6orf163Q5TEZ5 329 aa21.02■□□□□ 0.96
TMEM260-203ENST00000539559 MTHFD1LQ6UB35 978 aa21.02■□□□□ 0.96
TMEM260-203ENST00000539559 ATG14Q6ZNE5 492 aa21.02■□□□□ 0.96
TMEM260-203ENST00000539559 TRAPPC9Q96Q05 1148 aa21.02■□□□□ 0.96
TMEM260-203ENST00000539559 MAGEB5Q9BZ81 275 aa21.02■□□□□ 0.96
TMEM260-203ENST00000539559 RSAD1Q9HA92 442 aa21.02■□□□□ 0.96
TMEM260-203ENST00000539559 MAFBQ9Y5Q3 323 aaPredicted RBP21.02■□□□□ 0.96
TMEM260-203ENST00000539559 MSCO60682 206 aa21.02■□□□□ 0.96
TMEM260-203ENST00000539559 KCNA4P22459 653 aa21.02■□□□□ 0.96
TMEM260-203ENST00000539559 CNTN2Q02246 1040 aa21.02■□□□□ 0.96
TMEM260-203ENST00000539559 STX3Q13277 289 aa21.02■□□□□ 0.96
TMEM260-203ENST00000539559 ADGRF2Q8IZF7 708 aa21.02■□□□□ 0.96
TMEM260-203ENST00000539559 PPP1R14CQ8TAE6 165 aa21.02■□□□□ 0.96
TMEM260-203ENST00000539559 FRMD8P1Q9BZ68 369 aaPredicted RBP21.02■□□□□ 0.96
TMEM260-203ENST00000539559 SLC15A5A6NIM6 579 aa21.01■□□□□ 0.95
TMEM260-203ENST00000539559 B4GALT5O43286 388 aa21.01■□□□□ 0.95
TMEM260-203ENST00000539559 ZMPSTE24O75844 475 aa21.01■□□□□ 0.95
TMEM260-203ENST00000539559 MICAL2O94851 1124 aa21.01■□□□□ 0.95
TMEM260-203ENST00000539559 TSHRP16473 764 aa21.01■□□□□ 0.95
TMEM260-203ENST00000539559 ADORA2AP29274 412 aa21.01■□□□□ 0.95
TMEM260-203ENST00000539559 CRADDP78560 199 aa21.01■□□□□ 0.95
TMEM260-203ENST00000539559 TMEM132BQ14DG7 1078 aa21.01■□□□□ 0.95
TMEM260-203ENST00000539559 NOL9Q5SY16 702 aaKnown RBP21.01■□□□□ 0.95
TMEM260-203ENST00000539559 APLFQ8IW19 511 aaPredicted RBP21.01■□□□□ 0.95
TMEM260-203ENST00000539559 CHADO15335 359 aa21.01■□□□□ 0.95
TMEM260-203ENST00000539559 DDNO94850 711 aaPredicted RBP21.01■□□□□ 0.95
TMEM260-203ENST00000539559 IL1BP01584 269 aa21.01■□□□□ 0.95
TMEM260-203ENST00000539559 BPGMP07738 259 aa21.01■□□□□ 0.95
TMEM260-203ENST00000539559 CPOXP36551 454 aa21.01■□□□□ 0.95
TMEM260-203ENST00000539559 OAZ1P54368 228 aa21.01■□□□□ 0.95
TMEM260-203ENST00000539559 CA9Q16790 459 aa21.01■□□□□ 0.95
TMEM260-203ENST00000539559 CNPY1Q3B7I2 92 aa21.01■□□□□ 0.95
TMEM260-203ENST00000539559 SFT2D3Q587I9 215 aa21.01■□□□□ 0.95
TMEM260-203ENST00000539559 FAM91A1Q658Y4 838 aa21.01■□□□□ 0.95
TMEM260-203ENST00000539559 STKLD1Q8NE28 680 aa21.01■□□□□ 0.95
TMEM260-203ENST00000539559 SLC26A7Q8TE54 656 aa21.01■□□□□ 0.95
TMEM260-203ENST00000539559 RXFP2Q8WXD0 754 aa21.01■□□□□ 0.95
TMEM260-203ENST00000539559 PCYT2Q99447 389 aa21.01■□□□□ 0.95
TMEM260-203ENST00000539559 DDX43Q9NXZ2 648 aaKnown RBP21.01■□□□□ 0.95
TMEM260-203ENST00000539559 PACSIN3Q9UKS6 424 aa21.01■□□□□ 0.95
TMEM260-203ENST00000539559 DNAJC16Q9Y2G8 782 aa21.01■□□□□ 0.95
TMEM260-203ENST00000539559 BUD23O43709 281 aaKnown RBP21.01■□□□□ 0.95
TMEM260-203ENST00000539559 APOEP02649 317 aa21.01■□□□□ 0.95
TMEM260-203ENST00000539559 PRKG1Q13976 671 aa21.01■□□□□ 0.95
TMEM260-203ENST00000539559 KRT81Q14533 505 aa21.01■□□□□ 0.95
TMEM260-203ENST00000539559 VWA5B1Q5TIE3 1220 aa21.01■□□□□ 0.95
TMEM260-203ENST00000539559 PLD5Q8N7P1 536 aa21.01■□□□□ 0.95
TMEM260-203ENST00000539559 RNF149Q8NC42 400 aa21.01■□□□□ 0.95
TMEM260-203ENST00000539559 NETO2Q8NC67 525 aa21.01■□□□□ 0.95
TMEM260-203ENST00000539559 FNIP1Q8TF40 1166 aa21.01■□□□□ 0.95
TMEM260-203ENST00000539559 ELOVL4Q9GZR5 314 aa21.01■□□□□ 0.95
TMEM260-203ENST00000539559 XAB2Q9HCS7 855 aaKnown RBP21.01■□□□□ 0.95
TMEM260-203ENST00000539559 ETNK2Q9NVF9 386 aa21.01■□□□□ 0.95
TMEM260-203ENST00000539559 PDP2Q9P2J9 529 aa21.01■□□□□ 0.95
TMEM260-203ENST00000539559 ZNF214Q9UL59 606 aaPredicted RBP21.01■□□□□ 0.95
TMEM260-203ENST00000539559 SSC5DA1L4H1 1573 aa21■□□□□ 0.95
TMEM260-203ENST00000539559 CSDE1O75534 798 aaKnown RBP21■□□□□ 0.95
TMEM260-203ENST00000539559 STK10O94804 968 aaKnown RBP21■□□□□ 0.95
TMEM260-203ENST00000539559 RTN3O95197 1032 aaPredicted RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms