RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 OVCA2Q8WZ82 227 aa12.77□□□□□ -0.37
YBX3-207ENST00000539204 FBXO32Q969P5 355 aa12.77□□□□□ -0.37
YBX3-207ENST00000539204 FAM213AQ9BRX8 229 aa12.77□□□□□ -0.37
YBX3-207ENST00000539204 SEMA4CQ9C0C4 833 aa12.77□□□□□ -0.37
YBX3-207ENST00000539204 NACA2Q9H009 215 aa12.77□□□□□ -0.37
YBX3-207ENST00000539204 OSGEPQ9NPF4 335 aa12.77□□□□□ -0.37
YBX3-207ENST00000539204 MUC22E2RYF6 1773 aaPredicted RBP12.76□□□□□ -0.37
YBX3-207ENST00000539204 NPC1O15118 1278 aa12.76□□□□□ -0.37
YBX3-207ENST00000539204 SLC28A2O43868 658 aa12.76□□□□□ -0.37
YBX3-207ENST00000539204 IGLV3-19P01714 112 aa12.76□□□□□ -0.37
YBX3-207ENST00000539204 IRF1P10914 325 aa12.76□□□□□ -0.37
YBX3-207ENST00000539204 ADSSP30520 456 aa12.76□□□□□ -0.37
YBX3-207ENST00000539204 GNL1P36915 607 aaPredicted RBP12.76□□□□□ -0.37
YBX3-207ENST00000539204 CSRP3P50461 194 aa12.76□□□□□ -0.37
YBX3-207ENST00000539204 TOB1P50616 345 aaPredicted RBP12.76□□□□□ -0.37
YBX3-207ENST00000539204 IL9RQ01113 521 aa12.76□□□□□ -0.37
YBX3-207ENST00000539204 ORC1Q13415 861 aa12.76□□□□□ -0.37
YBX3-207ENST00000539204 LY6DQ14210 128 aa12.76□□□□□ -0.37
YBX3-207ENST00000539204 DHX8Q14562 1220 aaKnown RBP12.76□□□□□ -0.37
YBX3-207ENST00000539204 TBC1D25Q3MII6 688 aa12.76□□□□□ -0.37
YBX3-207ENST00000539204 MDH1BQ5I0G3 518 aa12.76□□□□□ -0.37
YBX3-207ENST00000539204 ARHGAP40Q5TG30 622 aa12.76□□□□□ -0.37
YBX3-207ENST00000539204 HES3Q5TGS1 186 aa12.76□□□□□ -0.37
YBX3-207ENST00000539204 BROXQ5VW32 411 aa12.76□□□□□ -0.37
YBX3-207ENST00000539204 SNX30Q5VWJ9 437 aa12.76□□□□□ -0.37
YBX3-207ENST00000539204 LIMS2Q7Z4I7 341 aa12.76□□□□□ -0.37
YBX3-207ENST00000539204 FAM124AQ86V42 546 aa12.76□□□□□ -0.37
YBX3-207ENST00000539204 FBXO18Q8NFZ0 1043 aa12.76□□□□□ -0.37
YBX3-207ENST00000539204 KBTBD7Q8WVZ9 684 aa12.76□□□□□ -0.37
YBX3-207ENST00000539204 WBP2Q969T9 261 aa12.76□□□□□ -0.37
YBX3-207ENST00000539204 HPDLQ96IR7 371 aa12.76□□□□□ -0.37
YBX3-207ENST00000539204 CNDP2Q96KP4 475 aaKnown RBP12.76□□□□□ -0.37
YBX3-207ENST00000539204 LGMNQ99538 433 aa12.76□□□□□ -0.37
YBX3-207ENST00000539204 CCSER2Q9H7U1 834 aa12.76□□□□□ -0.37
YBX3-207ENST00000539204 TM9SF3Q9HD45 589 aa12.76□□□□□ -0.37
YBX3-207ENST00000539204 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.76□□□□□ -0.37
YBX3-207ENST00000539204 MARK1Q9P0L2 795 aa12.76□□□□□ -0.37
YBX3-207ENST00000539204 SLCO1B1Q9Y6L6 691 aa12.76□□□□□ -0.37
YBX3-207ENST00000539204 PAPSS1O43252 624 aaPredicted RBP12.75□□□□□ -0.37
YBX3-207ENST00000539204 LDHAP00338 332 aaKnown RBP12.75□□□□□ -0.37
YBX3-207ENST00000539204 WARSP23381 471 aaKnown RBP12.75□□□□□ -0.37
YBX3-207ENST00000539204 CTSKP43235 329 aa12.75□□□□□ -0.37
YBX3-207ENST00000539204 TUBP50607 506 aa12.75□□□□□ -0.37
YBX3-207ENST00000539204 UCNP55089 124 aa12.75□□□□□ -0.37
YBX3-207ENST00000539204 WNT7BP56706 349 aa12.75□□□□□ -0.37
YBX3-207ENST00000539204 TMPRSS3P57727 454 aa12.75□□□□□ -0.37
YBX3-207ENST00000539204 DNAJC3Q13217 504 aa12.75□□□□□ -0.37
YBX3-207ENST00000539204 E2F5Q15329 346 aa12.75□□□□□ -0.37
YBX3-207ENST00000539204 FBXL19Q6PCT2 694 aa12.75□□□□□ -0.37
YBX3-207ENST00000539204 ADAT2Q7Z6V5 191 aaKnown RBP12.75□□□□□ -0.37
YBX3-207ENST00000539204 ZNF248Q8NDW4 579 aa12.75□□□□□ -0.37
YBX3-207ENST00000539204 UCMAQ8WVF2 138 aa12.75□□□□□ -0.37
YBX3-207ENST00000539204 FIZ1Q96SL8 496 aa12.75□□□□□ -0.37
YBX3-207ENST00000539204 MMS19Q96T76 1030 aa12.75□□□□□ -0.37
YBX3-207ENST00000539204 C6orf106Q9H6K1 298 aaPredicted RBP12.75□□□□□ -0.37
YBX3-207ENST00000539204 THAP10Q9P2Z0 257 aaPredicted RBP12.75□□□□□ -0.37
YBX3-207ENST00000539204 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.75□□□□□ -0.37
YBX3-207ENST00000539204 COL12A1Q99715 3063 aa12.75□□□□□ -0.37
YBX3-207ENST00000539204 A0A1B0GTQ1 180 aa12.74□□□□□ -0.37
YBX3-207ENST00000539204 TBCAO75347 108 aaKnown RBP12.74□□□□□ -0.37
YBX3-207ENST00000539204 NTRK1P04629 796 aa12.74□□□□□ -0.37
YBX3-207ENST00000539204 ITGAVP06756 1048 aa12.74□□□□□ -0.37
YBX3-207ENST00000539204 TMEM191BP0C7N4 346 aa12.74□□□□□ -0.37
YBX3-207ENST00000539204 PTPN1P18031 435 aaKnown RBP12.74□□□□□ -0.37
YBX3-207ENST00000539204 ACO1P21399 889 aaKnown RBP12.74□□□□□ -0.37
YBX3-207ENST00000539204 COPAP53621 1224 aa12.74□□□□□ -0.37
YBX3-207ENST00000539204 CACNA2D1P54289 1103 aa12.74□□□□□ -0.37
YBX3-207ENST00000539204 CDH8P55286 799 aa12.74□□□□□ -0.37
YBX3-207ENST00000539204 C21orf59P57076 290 aa12.74□□□□□ -0.37
YBX3-207ENST00000539204 ENPP2Q13822 863 aa12.74□□□□□ -0.37
YBX3-207ENST00000539204 TMEM119Q4V9L6 283 aa12.74□□□□□ -0.37
YBX3-207ENST00000539204 KCNT1Q5JUK3 1230 aa12.74□□□□□ -0.37
YBX3-207ENST00000539204 ZNF720Q7Z2F6 126 aa12.74□□□□□ -0.37
YBX3-207ENST00000539204 ERICH1Q86X53 443 aa12.74□□□□□ -0.37
YBX3-207ENST00000539204 GATAD2AQ86YP4 633 aa12.74□□□□□ -0.37
YBX3-207ENST00000539204 BRSK2Q8IWQ3 736 aa12.74□□□□□ -0.37
YBX3-207ENST00000539204 CACTIN-AS1Q8N1I8 211 aa12.74□□□□□ -0.37
YBX3-207ENST00000539204 MED8Q96G25 268 aa12.74□□□□□ -0.37
YBX3-207ENST00000539204 ELOVL4Q9GZR5 314 aa12.74□□□□□ -0.37
YBX3-207ENST00000539204 SNX25Q9H3E2 840 aa12.74□□□□□ -0.37
YBX3-207ENST00000539204 ST6GALNAC4Q9H4F1 302 aa12.74□□□□□ -0.37
YBX3-207ENST00000539204 RBAKQ9NYW8 714 aaPredicted RBP12.74□□□□□ -0.37
YBX3-207ENST00000539204 IL17BQ9UHF5 180 aa12.74□□□□□ -0.37
YBX3-207ENST00000539204 SIX4Q9UIU6 781 aa12.74□□□□□ -0.37
YBX3-207ENST00000539204 FBXO10Q9UK96 956 aa12.74□□□□□ -0.37
YBX3-207ENST00000539204 CBX4O00257 560 aa12.73□□□□□ -0.37
YBX3-207ENST00000539204 GREM1O60565 184 aa12.73□□□□□ -0.37
YBX3-207ENST00000539204 ABCB4P21439 1286 aa12.73□□□□□ -0.37
YBX3-207ENST00000539204 GLDCP23378 1020 aa12.73□□□□□ -0.37
YBX3-207ENST00000539204 CD27P26842 260 aa12.73□□□□□ -0.37
YBX3-207ENST00000539204 ACSL1P33121 698 aa12.73□□□□□ -0.37
YBX3-207ENST00000539204 GOLGA8FQ08AF8 430 aa12.73□□□□□ -0.37
YBX3-207ENST00000539204 GOLGA8DPQ0D2H9 430 aa12.73□□□□□ -0.37
YBX3-207ENST00000539204 PRAMEF14Q5SWL7 426 aa12.73□□□□□ -0.37
YBX3-207ENST00000539204 OR6B3Q8NGW1 331 aa12.73□□□□□ -0.37
YBX3-207ENST00000539204 SCAMP5Q8TAC9 235 aa12.73□□□□□ -0.37
YBX3-207ENST00000539204 BHMTQ93088 406 aa12.73□□□□□ -0.37
YBX3-207ENST00000539204 SKA1Q96BD8 255 aa12.73□□□□□ -0.37
YBX3-207ENST00000539204 BIRC7Q96CA5 298 aa12.73□□□□□ -0.37
YBX3-207ENST00000539204 SAAL1Q96ER3 474 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms