RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 SYNJ2BP-COX16A0A087WUM0 186 aa16.07■□□□□ 0.16
VAMP1-207ENST00000539047 GOLGA6L10A0A0M3HER8 536 aa16.07■□□□□ 0.16
VAMP1-207ENST00000539047 A0A1W2PQH9 124 aa16.07■□□□□ 0.16
VAMP1-207ENST00000539047 FAM92AA1XBS5 289 aa16.07■□□□□ 0.16
VAMP1-207ENST00000539047 SRGAP2O75044 1071 aa16.07■□□□□ 0.16
VAMP1-207ENST00000539047 ARHGEF15O94989 841 aa16.07■□□□□ 0.16
VAMP1-207ENST00000539047 ZRANB2O95218 330 aaKnown RBP eCLIP16.07■□□□□ 0.16
VAMP1-207ENST00000539047 C8AP07357 584 aa16.07■□□□□ 0.16
VAMP1-207ENST00000539047 AIF1P55008 147 aa16.07■□□□□ 0.16
VAMP1-207ENST00000539047 TAS2R40P59535 323 aa16.07■□□□□ 0.16
VAMP1-207ENST00000539047 COPS2P61201 443 aa16.07■□□□□ 0.16
VAMP1-207ENST00000539047 SMAD3P84022 425 aaKnown RBP16.07■□□□□ 0.16
VAMP1-207ENST00000539047 TAF10Q12962 218 aa16.07■□□□□ 0.16
VAMP1-207ENST00000539047 NME3Q13232 169 aa16.07■□□□□ 0.16
VAMP1-207ENST00000539047 KRT81Q14533 505 aa16.07■□□□□ 0.16
VAMP1-207ENST00000539047 BOLA3Q53S33 107 aa16.07■□□□□ 0.16
VAMP1-207ENST00000539047 TRNP1Q6NT89 227 aa16.07■□□□□ 0.16
VAMP1-207ENST00000539047 MAP7D3Q8IWC1 876 aa16.07■□□□□ 0.16
VAMP1-207ENST00000539047 RCOR2Q8IZ40 523 aa16.07■□□□□ 0.16
VAMP1-207ENST00000539047 TEKT4Q8WW24 435 aa16.07■□□□□ 0.16
VAMP1-207ENST00000539047 RNF34Q969K3 372 aa16.07■□□□□ 0.16
VAMP1-207ENST00000539047 TIFAQ96CG3 184 aa16.07■□□□□ 0.16
VAMP1-207ENST00000539047 SERPINB11Q96P15 392 aa16.07■□□□□ 0.16
VAMP1-207ENST00000539047 NACA2Q9H009 215 aa16.07■□□□□ 0.16
VAMP1-207ENST00000539047 SMOC2Q9H3U7 446 aa16.07■□□□□ 0.16
VAMP1-207ENST00000539047 PLEKHA4Q9H4M7 779 aa16.07■□□□□ 0.16
VAMP1-207ENST00000539047 TRPM5Q9NZQ8 1165 aa16.07■□□□□ 0.16
VAMP1-207ENST00000539047 COX16Q9P0S2 106 aa16.07■□□□□ 0.16
VAMP1-207ENST00000539047 PCSK1NQ9UHG2 260 aa16.07■□□□□ 0.16
VAMP1-207ENST00000539047 ATG2AQ2TAZ0 1938 aa16.07■□□□□ 0.16
VAMP1-207ENST00000539047 A0A0C4DFX4 3053 aa16.06■□□□□ 0.16
VAMP1-207ENST00000539047 OBSL1O75147 1896 aa16.06■□□□□ 0.16
VAMP1-207ENST00000539047 LRRD1A4D1F6 860 aa16.06■□□□□ 0.16
VAMP1-207ENST00000539047 CTAGE15A4D2H0 777 aa16.06■□□□□ 0.16
VAMP1-207ENST00000539047 HIDE1A8MVS5 230 aa16.06■□□□□ 0.16
VAMP1-207ENST00000539047 SLU7O95391 586 aaKnown RBP16.06■□□□□ 0.16
VAMP1-207ENST00000539047 FGF19O95750 216 aa16.06■□□□□ 0.16
VAMP1-207ENST00000539047 TRUB2O95900 331 aaKnown RBP16.06■□□□□ 0.16
VAMP1-207ENST00000539047 CTAGE8P0CG41 777 aa16.06■□□□□ 0.16
VAMP1-207ENST00000539047 DNAJB1P25685 340 aa16.06■□□□□ 0.16
VAMP1-207ENST00000539047 MARCKSL1P49006 195 aa16.06■□□□□ 0.16
VAMP1-207ENST00000539047 USP46P62068 366 aa16.06■□□□□ 0.16
VAMP1-207ENST00000539047 SLC25A11Q02978 314 aaKnown RBP16.06■□□□□ 0.16
VAMP1-207ENST00000539047 PABPC1LQ4VXU2 614 aaKnown RBP16.06■□□□□ 0.16
VAMP1-207ENST00000539047 DAB2IPQ5VWQ8 1189 aa16.06■□□□□ 0.16
VAMP1-207ENST00000539047 BHLHA9Q7RTU4 235 aa16.06■□□□□ 0.16
VAMP1-207ENST00000539047 CTAGE6Q86UF2 777 aa16.06■□□□□ 0.16
VAMP1-207ENST00000539047 CTAGE4Q8IX94 777 aa16.06■□□□□ 0.16
VAMP1-207ENST00000539047 KCTD6Q8NC69 237 aa16.06■□□□□ 0.16
VAMP1-207ENST00000539047 ACTRT1Q8TDG2 376 aa16.06■□□□□ 0.16
VAMP1-207ENST00000539047 COG1Q8WTW3 980 aa16.06■□□□□ 0.16
VAMP1-207ENST00000539047 HDAC7Q8WUI4 952 aa16.06■□□□□ 0.16
VAMP1-207ENST00000539047 HSPH1Q92598 858 aa16.06■□□□□ 0.16
VAMP1-207ENST00000539047 CENPIQ92674 756 aaPredicted RBP16.06■□□□□ 0.16
VAMP1-207ENST00000539047 ALG3Q92685 438 aa16.06■□□□□ 0.16
VAMP1-207ENST00000539047 PSMG2Q969U7 264 aa16.06■□□□□ 0.16
VAMP1-207ENST00000539047 PGAP3Q96FM1 320 aaPredicted RBP16.06■□□□□ 0.16
VAMP1-207ENST00000539047 CERS4Q9HA82 394 aa16.06■□□□□ 0.16
VAMP1-207ENST00000539047 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.06■□□□□ 0.16
VAMP1-207ENST00000539047 ZNF185O15231 689 aa16.05■□□□□ 0.16
VAMP1-207ENST00000539047 SPATA31D3P0C874 917 aa16.05■□□□□ 0.16
VAMP1-207ENST00000539047 SLC2A3P11169 496 aa16.05■□□□□ 0.16
VAMP1-207ENST00000539047 RARGP13631 454 aa16.05■□□□□ 0.16
VAMP1-207ENST00000539047 PEX5P50542 639 aa16.05■□□□□ 0.16
VAMP1-207ENST00000539047 CLCN4P51793 760 aa16.05■□□□□ 0.16
VAMP1-207ENST00000539047 KPNA1P52294 538 aaPredicted RBP16.05■□□□□ 0.16
VAMP1-207ENST00000539047 HDAC4P56524 1084 aa16.05■□□□□ 0.16
VAMP1-207ENST00000539047 TUBB4BP68371 445 aa16.05■□□□□ 0.16
VAMP1-207ENST00000539047 ZNF211Q13398 564 aaPredicted RBP16.05■□□□□ 0.16
VAMP1-207ENST00000539047 MTMR3Q13615 1198 aa16.05■□□□□ 0.16
VAMP1-207ENST00000539047 LONRF2Q1L5Z9 754 aa16.05■□□□□ 0.16
VAMP1-207ENST00000539047 SMTNL2Q2TAL5 461 aa16.05■□□□□ 0.16
VAMP1-207ENST00000539047 EFHC2Q5JST6 749 aa16.05■□□□□ 0.16
VAMP1-207ENST00000539047 C10orf120Q5SQS8 335 aa16.05■□□□□ 0.16
VAMP1-207ENST00000539047 SYPL2Q5VXT5 272 aa16.05■□□□□ 0.16
VAMP1-207ENST00000539047 CCDC70Q6NSX1 233 aa16.05■□□□□ 0.16
VAMP1-207ENST00000539047 MSANTD2Q6P1R3 559 aa16.05■□□□□ 0.16
VAMP1-207ENST00000539047 LILRA6Q6PI73 481 aa16.05■□□□□ 0.16
VAMP1-207ENST00000539047 SPATA31D4Q6ZUB0 917 aa16.05■□□□□ 0.16
VAMP1-207ENST00000539047 CPNE8Q86YQ8 564 aa16.05■□□□□ 0.16
VAMP1-207ENST00000539047 PSTKQ8IV42 348 aaKnown RBP16.05■□□□□ 0.16
VAMP1-207ENST00000539047 DQX1Q8TE96 717 aaKnown RBP16.05■□□□□ 0.16
VAMP1-207ENST00000539047 GDPD5Q8WTR4 605 aa16.05■□□□□ 0.16
VAMP1-207ENST00000539047 NT5C3BQ969T7 300 aa16.05■□□□□ 0.16
VAMP1-207ENST00000539047 MYRFLQ96LU7 910 aa16.05■□□□□ 0.16
VAMP1-207ENST00000539047 MAN1C1Q9NR34 630 aa16.05■□□□□ 0.16
VAMP1-207ENST00000539047 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.05■□□□□ 0.16
VAMP1-207ENST00000539047 RIOK3O14730 519 aaKnown RBP16.04■□□□□ 0.16
VAMP1-207ENST00000539047 MDM4O15151 490 aa16.04■□□□□ 0.16
VAMP1-207ENST00000539047 XYLBO75191 536 aa16.04■□□□□ 0.16
VAMP1-207ENST00000539047 ENDOD1O94919 500 aa16.04■□□□□ 0.16
VAMP1-207ENST00000539047 FYNP06241 537 aa16.04■□□□□ 0.16
VAMP1-207ENST00000539047 SRGAP2BP0DMP2 458 aa16.04■□□□□ 0.16
VAMP1-207ENST00000539047 HOXA9P31269 272 aa16.04■□□□□ 0.16
VAMP1-207ENST00000539047 MTA1Q13330 715 aa16.04■□□□□ 0.16
VAMP1-207ENST00000539047 PDK2Q15119 407 aa16.04■□□□□ 0.16
VAMP1-207ENST00000539047 BRMS1LQ5PSV4 323 aa16.04■□□□□ 0.16
VAMP1-207ENST00000539047 ERMARDQ5T6L9 678 aa16.04■□□□□ 0.16
VAMP1-207ENST00000539047 SH3PXD2AQ5TCZ1 1133 aa16.04■□□□□ 0.16
VAMP1-207ENST00000539047 SPRED2Q7Z698 418 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms