RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 GOLGA8DPQ0D2H9 430 aa13.19□□□□□ -0.3
VAMP1-206ENST00000538970 ZCWPW2Q504Y3 356 aa13.19□□□□□ -0.3
VAMP1-206ENST00000538970 GRAMD4Q6IC98 578 aa13.19□□□□□ -0.3
VAMP1-206ENST00000538970 KLHDC10Q6PID8 442 aa13.19□□□□□ -0.3
VAMP1-206ENST00000538970 KRBA2Q6ZNG9 492 aa13.19□□□□□ -0.3
VAMP1-206ENST00000538970 NUDT18Q6ZVK8 323 aa13.19□□□□□ -0.3
VAMP1-206ENST00000538970 ARMCX6Q7L4S7 300 aa13.19□□□□□ -0.3
VAMP1-206ENST00000538970 MIB1Q86YT6 1006 aa13.19□□□□□ -0.3
VAMP1-206ENST00000538970 TMEFF1Q8IYR6 380 aa13.19□□□□□ -0.3
VAMP1-206ENST00000538970 GUF1Q8N442 669 aaKnown RBP13.19□□□□□ -0.3
VAMP1-206ENST00000538970 PIGKQ92643 395 aa13.19□□□□□ -0.3
VAMP1-206ENST00000538970 MMRN2Q9H8L6 949 aa13.19□□□□□ -0.3
VAMP1-206ENST00000538970 TMEM8AQ9HCN3 771 aa13.19□□□□□ -0.3
VAMP1-206ENST00000538970 TMEM9BQ9NQ34 198 aa13.19□□□□□ -0.3
VAMP1-206ENST00000538970 DNAJC17Q9NVM6 304 aaKnown RBP13.19□□□□□ -0.3
VAMP1-206ENST00000538970 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.19□□□□□ -0.3
VAMP1-206ENST00000538970 EVLQ9UI08 416 aaPredicted RBP13.19□□□□□ -0.3
VAMP1-206ENST00000538970 LSM7Q9UK45 103 aaKnown RBP13.19□□□□□ -0.3
VAMP1-206ENST00000538970 LHX6Q9UPM6 363 aa13.19□□□□□ -0.3
VAMP1-206ENST00000538970 WASF3Q9UPY6 502 aa13.19□□□□□ -0.3
VAMP1-206ENST00000538970 STARD13Q9Y3M8 1113 aa13.19□□□□□ -0.3
VAMP1-206ENST00000538970 LAMA1P25391 3075 aa13.19□□□□□ -0.3
VAMP1-206ENST00000538970 IGF2RP11717 2491 aa13.19□□□□□ -0.3
VAMP1-206ENST00000538970 AKAP13Q12802 2813 aa13.19□□□□□ -0.3
VAMP1-206ENST00000538970 A0A1W2PQ27 194 aa13.18□□□□□ -0.3
VAMP1-206ENST00000538970 A0A1W2PQ64 194 aa13.18□□□□□ -0.3
VAMP1-206ENST00000538970 A0A1W2PQD8 194 aa13.18□□□□□ -0.3
VAMP1-206ENST00000538970 A0A1W2PQF6 199 aa13.18□□□□□ -0.3
VAMP1-206ENST00000538970 A0A1W2PQH9 124 aa13.18□□□□□ -0.3
VAMP1-206ENST00000538970 CDX4O14627 284 aaPredicted RBP13.18□□□□□ -0.3
VAMP1-206ENST00000538970 MDM4O15151 490 aa13.18□□□□□ -0.3
VAMP1-206ENST00000538970 MAP3K13O43283 966 aa13.18□□□□□ -0.3
VAMP1-206ENST00000538970 RARGP13631 454 aa13.18□□□□□ -0.3
VAMP1-206ENST00000538970 HOXB2P14652 356 aa13.18□□□□□ -0.3
VAMP1-206ENST00000538970 TYRP14679 529 aa13.18□□□□□ -0.3
VAMP1-206ENST00000538970 GABRG2P18507 467 aa13.18□□□□□ -0.3
VAMP1-206ENST00000538970 RPL13P26373 211 aaKnown RBP13.18□□□□□ -0.3
VAMP1-206ENST00000538970 PSMC2P35998 433 aaKnown RBP13.18□□□□□ -0.3
VAMP1-206ENST00000538970 NOVA1P51513 510 aaKnown RBP13.18□□□□□ -0.3
VAMP1-206ENST00000538970 KIF11P52732 1056 aa13.18□□□□□ -0.3
VAMP1-206ENST00000538970 MCCD1P59942 119 aaPredicted RBP13.18□□□□□ -0.3
VAMP1-206ENST00000538970 BYSLQ13895 437 aaKnown RBP13.18□□□□□ -0.3
VAMP1-206ENST00000538970 SPDYCQ5MJ68 293 aa13.18□□□□□ -0.3
VAMP1-206ENST00000538970 DAB2IPQ5VWQ8 1189 aa13.18□□□□□ -0.3
VAMP1-206ENST00000538970 EGFLAMQ63HQ2 1017 aa13.18□□□□□ -0.3
VAMP1-206ENST00000538970 Q6ZNB5 142 aa13.18□□□□□ -0.3
VAMP1-206ENST00000538970 PGBD3Q8N328 593 aa13.18□□□□□ -0.3
VAMP1-206ENST00000538970 XPO6Q96QU8 1125 aaKnown RBP13.18□□□□□ -0.3
VAMP1-206ENST00000538970 BBS2Q9BXC9 721 aa13.18□□□□□ -0.3
VAMP1-206ENST00000538970 GOLPH3LQ9H4A5 285 aa13.18□□□□□ -0.3
VAMP1-206ENST00000538970 CD248Q9HCU0 757 aa13.18□□□□□ -0.3
VAMP1-206ENST00000538970 CALCOCO1Q9P1Z2 691 aa13.18□□□□□ -0.3
VAMP1-206ENST00000538970 WDR35Q9P2L0 1181 aa13.18□□□□□ -0.3
VAMP1-206ENST00000538970 NUDT5Q9UKK9 219 aa13.18□□□□□ -0.3
VAMP1-206ENST00000538970 TNRC6BQ9UPQ9 1833 aaKnown RBP13.18□□□□□ -0.3
VAMP1-206ENST00000538970 PLXND1Q9Y4D7 1925 aa13.17□□□□□ -0.3
VAMP1-206ENST00000538970 ATXN2Q99700 1313 aaKnown RBP13.17□□□□□ -0.3
VAMP1-206ENST00000538970 NTSR1P30989 418 aa13.17□□□□□ -0.3
VAMP1-206ENST00000538970 WASP42768 502 aa13.17□□□□□ -0.3
VAMP1-206ENST00000538970 PSEN1P49768 467 aa13.17□□□□□ -0.3
VAMP1-206ENST00000538970 IRX4P78413 519 aa13.17□□□□□ -0.3
VAMP1-206ENST00000538970 FOXC1Q12948 553 aa13.17□□□□□ -0.3
VAMP1-206ENST00000538970 ADAM9Q13443 819 aa13.17□□□□□ -0.3
VAMP1-206ENST00000538970 EDRF1Q3B7T1 1238 aa13.17□□□□□ -0.3
VAMP1-206ENST00000538970 TRIM61Q5EBN2 209 aa13.17□□□□□ -0.3
VAMP1-206ENST00000538970 C10orf120Q5SQS8 335 aa13.17□□□□□ -0.3
VAMP1-206ENST00000538970 PPP1R26Q5T8A7 1209 aaPredicted RBP13.17□□□□□ -0.3
VAMP1-206ENST00000538970 PEAR1Q5VY43 1037 aaPredicted RBP13.17□□□□□ -0.3
VAMP1-206ENST00000538970 LYSMD4Q5XG99 296 aa13.17□□□□□ -0.3
VAMP1-206ENST00000538970 KRT39Q6A163 491 aa13.17□□□□□ -0.3
VAMP1-206ENST00000538970 TPGS1Q6ZTW0 290 aa13.17□□□□□ -0.3
VAMP1-206ENST00000538970 TOGARAM2Q6ZUX3 1019 aa13.17□□□□□ -0.3
VAMP1-206ENST00000538970 CCDC186Q7Z3E2 898 aa13.17□□□□□ -0.3
VAMP1-206ENST00000538970 SCD5Q86SK9 330 aa13.17□□□□□ -0.3
VAMP1-206ENST00000538970 SYT12Q8IV01 421 aa13.17□□□□□ -0.3
VAMP1-206ENST00000538970 CCDC150Q8NCX0 1101 aa13.17□□□□□ -0.3
VAMP1-206ENST00000538970 ACOX2Q99424 681 aa13.17□□□□□ -0.3
VAMP1-206ENST00000538970 GABRG3Q99928 467 aa13.17□□□□□ -0.3
VAMP1-206ENST00000538970 DUSP16Q9BY84 665 aa13.17□□□□□ -0.3
VAMP1-206ENST00000538970 TMEM74BQ9NUR3 256 aa13.17□□□□□ -0.3
VAMP1-206ENST00000538970 DNMT3LQ9UJW3 386 aa13.17□□□□□ -0.3
VAMP1-206ENST00000538970 NAGPAQ9UK23 515 aa13.17□□□□□ -0.3
VAMP1-206ENST00000538970 USP3Q9Y6I4 520 aa13.17□□□□□ -0.3
VAMP1-206ENST00000538970 NUP205Q92621 2012 aa13.17□□□□□ -0.3
VAMP1-206ENST00000538970 MYOFQ9NZM1 2061 aa13.16□□□□□ -0.3
VAMP1-206ENST00000538970 PRRT4C9JH25 899 aa13.16□□□□□ -0.3
VAMP1-206ENST00000538970 AP5Z1O43299 807 aa13.16□□□□□ -0.3
VAMP1-206ENST00000538970 STC2O76061 302 aa13.16□□□□□ -0.3
VAMP1-206ENST00000538970 CISD3P0C7P0 127 aa13.16□□□□□ -0.3
VAMP1-206ENST00000538970 GTF2H1P32780 548 aa13.16□□□□□ -0.3
VAMP1-206ENST00000538970 DPP6P42658 865 aa13.16□□□□□ -0.3
VAMP1-206ENST00000538970 PLA2G4AP47712 749 aa13.16□□□□□ -0.3
VAMP1-206ENST00000538970 DGKGP49619 791 aa13.16□□□□□ -0.3
VAMP1-206ENST00000538970 MXI1P50539 228 aa13.16□□□□□ -0.3
VAMP1-206ENST00000538970 LMAN2Q12907 356 aa13.16□□□□□ -0.3
VAMP1-206ENST00000538970 ZNF394Q53GI3 561 aa13.16□□□□□ -0.3
VAMP1-206ENST00000538970 SH3PXD2AQ5TCZ1 1133 aa13.16□□□□□ -0.3
VAMP1-206ENST00000538970 TADA2BQ86TJ2 420 aa13.16□□□□□ -0.3
VAMP1-206ENST00000538970 SMYD4Q8IYR2 804 aaPredicted RBP13.16□□□□□ -0.3
VAMP1-206ENST00000538970 CHPFQ8IZ52 775 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms