RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 HADHQ16836 314 aaKnown RBP19.24■□□□□ 0.67
SFSWAP-207ENST00000538548 USP41Q3LFD5 358 aa19.24■□□□□ 0.67
SFSWAP-207ENST00000538548 SPDYE2Q495Y8 402 aa19.24■□□□□ 0.67
SFSWAP-207ENST00000538548 CC2D2BQ6DHV5 1058 aa19.24■□□□□ 0.67
SFSWAP-207ENST00000538548 TMEM35BQ8NCS4 154 aa19.24■□□□□ 0.67
SFSWAP-207ENST00000538548 FAM96AQ9H5X1 160 aa19.24■□□□□ 0.67
SFSWAP-207ENST00000538548 TBC1D22BQ9NU19 505 aa19.24■□□□□ 0.67
SFSWAP-207ENST00000538548 PTPRJQ12913 1337 aa19.24■□□□□ 0.67
SFSWAP-207ENST00000538548 LRCH4O75427 683 aa19.24■□□□□ 0.67
SFSWAP-207ENST00000538548 ATP6V1B1P15313 513 aa19.24■□□□□ 0.67
SFSWAP-207ENST00000538548 NRLP54845 237 aa19.24■□□□□ 0.67
SFSWAP-207ENST00000538548 WNT7BP56706 349 aa19.24■□□□□ 0.67
SFSWAP-207ENST00000538548 SAMD1Q6SPF0 538 aaPredicted RBP19.24■□□□□ 0.67
SFSWAP-207ENST00000538548 ZNF554Q86TJ5 538 aa19.24■□□□□ 0.67
SFSWAP-207ENST00000538548 NUP93Q8N1F7 819 aa19.24■□□□□ 0.67
SFSWAP-207ENST00000538548 ABTB1Q969K4 478 aaPredicted RBP19.24■□□□□ 0.67
SFSWAP-207ENST00000538548 KCNK16Q96T55 309 aa19.24■□□□□ 0.67
SFSWAP-207ENST00000538548 POPDC2Q9HBU9 364 aa19.24■□□□□ 0.67
SFSWAP-207ENST00000538548 NUB1Q9Y5A7 615 aa19.24■□□□□ 0.67
SFSWAP-207ENST00000538548 TMED1Q13445 227 aa19.23■□□□□ 0.67
SFSWAP-207ENST00000538548 APOFQ13790 326 aa19.23■□□□□ 0.67
SFSWAP-207ENST00000538548 FASTKD1Q53R41 847 aaKnown RBP19.23■□□□□ 0.67
SFSWAP-207ENST00000538548 RFX6Q8HWS3 928 aa19.23■□□□□ 0.67
SFSWAP-207ENST00000538548 IL31RAQ8NI17 732 aa19.23■□□□□ 0.67
SFSWAP-207ENST00000538548 SPATA18Q8TC71 538 aa19.23■□□□□ 0.67
SFSWAP-207ENST00000538548 CHURC1Q8WUH1 139 aa19.23■□□□□ 0.67
SFSWAP-207ENST00000538548 FAF2Q96CS3 445 aa19.23■□□□□ 0.67
SFSWAP-207ENST00000538548 ZNF518BQ9C0D4 1074 aa19.23■□□□□ 0.67
SFSWAP-207ENST00000538548 DEFB129Q9H1M3 183 aa19.23■□□□□ 0.67
SFSWAP-207ENST00000538548 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.23■□□□□ 0.67
SFSWAP-207ENST00000538548 ADCY3O60266 1144 aa19.23■□□□□ 0.67
SFSWAP-207ENST00000538548 NPM3O75607 178 aaKnown RBP19.23■□□□□ 0.67
SFSWAP-207ENST00000538548 TRMUO75648 421 aaKnown RBP19.23■□□□□ 0.67
SFSWAP-207ENST00000538548 STAM2O75886 525 aa19.23■□□□□ 0.67
SFSWAP-207ENST00000538548 CRTAMO95727 393 aa19.23■□□□□ 0.67
SFSWAP-207ENST00000538548 HNRNPCP07910 306 aaKnown RBP eCLIP19.23■□□□□ 0.673e-8■□□□□ 8.6
SFSWAP-207ENST00000538548 SRGAP2CP0DJJ0 459 aa19.23■□□□□ 0.67
SFSWAP-207ENST00000538548 SRGAP2BP0DMP2 458 aa19.23■□□□□ 0.67
SFSWAP-207ENST00000538548 PCSK6P29122 969 aa19.23■□□□□ 0.67
SFSWAP-207ENST00000538548 SLC5A2P31639 672 aa19.23■□□□□ 0.67
SFSWAP-207ENST00000538548 GALK1P51570 392 aa19.23■□□□□ 0.67
SFSWAP-207ENST00000538548 HSD17B4P51659 736 aa19.23■□□□□ 0.67
SFSWAP-207ENST00000538548 ROR1Q01973 937 aa19.23■□□□□ 0.67
SFSWAP-207ENST00000538548 RARS2Q5T160 578 aaKnown RBP19.23■□□□□ 0.67
SFSWAP-207ENST00000538548 SYCP2LQ5T4T6 812 aa19.23■□□□□ 0.67
SFSWAP-207ENST00000538548 TEDDM1Q5T9Z0 273 aa19.23■□□□□ 0.67
SFSWAP-207ENST00000538548 MBLAC2Q68D91 279 aa19.23■□□□□ 0.67
SFSWAP-207ENST00000538548 DUS1LQ6P1R4 473 aaKnown RBP19.23■□□□□ 0.67
SFSWAP-207ENST00000538548 TMEM126BQ8IUX1 230 aa19.23■□□□□ 0.67
SFSWAP-207ENST00000538548 SMYD2Q9NRG4 433 aa19.23■□□□□ 0.67
SFSWAP-207ENST00000538548 PCDHAC2Q9Y5I4 1007 aa19.23■□□□□ 0.67
SFSWAP-207ENST00000538548 AP4B1Q9Y6B7 739 aa19.23■□□□□ 0.67
SFSWAP-207ENST00000538548 LRRC37AA6NMS7 1700 aa19.23■□□□□ 0.67
SFSWAP-207ENST00000538548 LYPLA1O75608 230 aaPredicted RBP19.22■□□□□ 0.67
SFSWAP-207ENST00000538548 NR1H2P55055 460 aa19.22■□□□□ 0.67
SFSWAP-207ENST00000538548 HDAC4P56524 1084 aa19.22■□□□□ 0.67
SFSWAP-207ENST00000538548 MYBPC1Q00872 1141 aa19.22■□□□□ 0.67
SFSWAP-207ENST00000538548 CREB5Q02930 508 aa19.22■□□□□ 0.67
SFSWAP-207ENST00000538548 MTMR1Q13613 665 aa19.22■□□□□ 0.67
SFSWAP-207ENST00000538548 LDHDQ86WU2 507 aa19.22■□□□□ 0.67
SFSWAP-207ENST00000538548 ARFGAP1Q8N6T3 406 aa19.22■□□□□ 0.67
SFSWAP-207ENST00000538548 CATSPER1Q8NEC5 780 aa19.22■□□□□ 0.67
SFSWAP-207ENST00000538548 CEP70Q8NHQ1 597 aa19.22■□□□□ 0.67
SFSWAP-207ENST00000538548 MRPL1Q9BYD6 325 aaKnown RBP19.22■□□□□ 0.67
SFSWAP-207ENST00000538548 SHCBP1LQ9BZQ2 653 aa19.22■□□□□ 0.67
SFSWAP-207ENST00000538548 DBNDD1Q9H9R9 158 aa19.22■□□□□ 0.67
SFSWAP-207ENST00000538548 DNAJC28Q9NX36 388 aa19.22■□□□□ 0.67
SFSWAP-207ENST00000538548 UBIAD1Q9Y5Z9 338 aa19.22■□□□□ 0.67
SFSWAP-207ENST00000538548 ITM2AO43736 263 aa19.22■□□□□ 0.67
SFSWAP-207ENST00000538548 UGT1A9O60656 530 aa19.22■□□□□ 0.67
SFSWAP-207ENST00000538548 APOEP02649 317 aa19.22■□□□□ 0.67
SFSWAP-207ENST00000538548 FRMD7Q6ZUT3 714 aa19.22■□□□□ 0.67
SFSWAP-207ENST00000538548 ZNF410Q86VK4 478 aa19.22■□□□□ 0.67
SFSWAP-207ENST00000538548 SP8Q8IXZ3 490 aa19.22■□□□□ 0.67
SFSWAP-207ENST00000538548 ADGRF2Q8IZF7 708 aa19.22■□□□□ 0.67
SFSWAP-207ENST00000538548 TFB1MQ8WVM0 346 aaKnown RBP19.22■□□□□ 0.67
SFSWAP-207ENST00000538548 UGT1A7Q9HAW7 530 aa19.22■□□□□ 0.67
SFSWAP-207ENST00000538548 UGT1A10Q9HAW8 530 aa19.22■□□□□ 0.67
SFSWAP-207ENST00000538548 UGT1A8Q9HAW9 530 aa19.22■□□□□ 0.67
SFSWAP-207ENST00000538548 PLAC1Q9HBJ0 212 aa19.22■□□□□ 0.67
SFSWAP-207ENST00000538548 ARHGAP26Q9UNA1 814 aa19.22■□□□□ 0.67
SFSWAP-207ENST00000538548 CSH1P0DML2 217 aa19.21■□□□□ 0.67
SFSWAP-207ENST00000538548 CSH2P0DML3 217 aa19.21■□□□□ 0.67
SFSWAP-207ENST00000538548 RFC1P35251 1148 aaPredicted RBP19.21■□□□□ 0.67
SFSWAP-207ENST00000538548 SLC1A6P48664 564 aa19.21■□□□□ 0.67
SFSWAP-207ENST00000538548 SOX10P56693 466 aa19.21■□□□□ 0.67
SFSWAP-207ENST00000538548 NLRP11P59045 1033 aaKnown RBP19.21■□□□□ 0.67
SFSWAP-207ENST00000538548 STXBP5Q5T5C0 1151 aa19.21■□□□□ 0.67
SFSWAP-207ENST00000538548 CYP4A22Q5TCH4 519 aa19.21■□□□□ 0.67
SFSWAP-207ENST00000538548 PDPK2PQ6A1A2 396 aa19.21■□□□□ 0.67
SFSWAP-207ENST00000538548 DARS2Q6PI48 645 aaKnown RBP19.21■□□□□ 0.67
SFSWAP-207ENST00000538548 PRPF18Q99633 342 aaKnown RBP19.21■□□□□ 0.67
SFSWAP-207ENST00000538548 HOMER2Q9NSB8 354 aa19.21■□□□□ 0.67
SFSWAP-207ENST00000538548 ARHGAP28Q9P2N2 729 aa19.21■□□□□ 0.67
SFSWAP-207ENST00000538548 APPL1Q9UKG1 709 aa19.21■□□□□ 0.67
SFSWAP-207ENST00000538548 PCDHGB4Q9UN71 923 aa19.21■□□□□ 0.67
SFSWAP-207ENST00000538548 PCDHGB5Q9Y5G0 923 aa19.21■□□□□ 0.67
SFSWAP-207ENST00000538548 HMX2A2RU54 273 aa19.21■□□□□ 0.67
SFSWAP-207ENST00000538548 GSRP00390 522 aa19.21■□□□□ 0.67
SFSWAP-207ENST00000538548 CPA3P15088 417 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms