RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 MPPE1Q53F39 396 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 SMUG1Q53HV7 270 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 RTP2Q5QGT7 225 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 PPP1R15BQ5SWA1 713 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 GPR158Q5T848 1215 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 ISM2Q6H9L7 571 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 MSANTD2Q6P1R3 559 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 DSG4Q86SJ6 1040 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 SRLQ86TD4 932 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 RALGPS2Q86X27 583 aaPredicted RBP3.73□□□□□ -1.81
PTPN22-211ENST00000538253 GAS2L3Q86XJ1 694 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 SMYD4Q8IYR2 804 aaPredicted RBP3.73□□□□□ -1.81
PTPN22-211ENST00000538253 LZTR1Q8N653 840 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 HJURPQ8NCD3 748 aaPredicted RBP3.73□□□□□ -1.81
PTPN22-211ENST00000538253 PPP1R13LQ8WUF5 828 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 GIMAP1Q8WWP7 306 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 CASKIN2Q8WXE0 1202 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 SUSD6Q92537 303 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 USP13Q92995 863 aaPredicted RBP3.73□□□□□ -1.81
PTPN22-211ENST00000538253 CLIP3Q96DZ5 547 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 PANX2Q96RD6 677 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 BAG1Q99933 345 aaPredicted RBP3.73□□□□□ -1.81
PTPN22-211ENST00000538253 BRD9Q9H8M2 597 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 ZDHHC4Q9NPG8 344 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 KCTD5Q9NXV2 234 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 AIPL1Q9NZN9 384 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 TJP2Q9UDY2 1190 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 ZKSCAN5Q9Y2L8 839 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 RAD54BQ9Y620 910 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 TRIM49BA6NDI0 452 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 O00370 1275 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 DCXO43602 365 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 DTNBO60941 627 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 LTFP02788 710 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 RHOP08100 348 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 PDGFRBP09619 1106 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 SRFP11831 508 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 PECAM1P16284 738 aaPredicted RBP3.73□□□□□ -1.81
PTPN22-211ENST00000538253 PSMC3P17980 439 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 HDCP19113 662 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 DRD1P21728 446 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 ADORA2BP29275 332 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 CASP1P29466 404 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 CDH5P33151 784 aaPredicted RBP3.73□□□□□ -1.81
PTPN22-211ENST00000538253 SERPINB6P35237 376 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 HOXD13P35453 343 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 ARHGAP25P42331 645 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 ASPAP45381 313 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 ST8SIA6P61647 398 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 RAD51Q06609 339 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 SOX4Q06945 474 aaPredicted RBP3.73□□□□□ -1.81
PTPN22-211ENST00000538253 PIGHQ14442 188 aaPredicted RBP3.73□□□□□ -1.81
PTPN22-211ENST00000538253 TRIP4Q15650 581 aaPredicted RBP3.73□□□□□ -1.81
PTPN22-211ENST00000538253 ITPRIPL2Q3MIP1 535 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 RNF219Q5W0B1 726 aaPredicted RBP3.73□□□□□ -1.81
PTPN22-211ENST00000538253 OR6B2Q6IFH4 312 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 ALKBH2Q6NS38 261 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 PHLDB3Q6NSJ2 640 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 LLGL2Q6P1M3 1020 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 PRSS55Q6UWB4 352 aaPredicted RBP3.73□□□□□ -1.81
PTPN22-211ENST00000538253 ZNF783Q6ZMS7 281 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 MMS22LQ6ZRQ5 1243 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 ACOT1Q86TX2 421 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.73□□□□□ -1.81
PTPN22-211ENST00000538253 GJD3Q8N144 294 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 KRT222Q8N1A0 295 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 ARMC2Q8NEN0 867 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 FNIP1Q8TF40 1166 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 FAM149B1Q96BN6 582 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 HAUS1Q96CS2 278 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 PPP1R13BQ96KQ4 1090 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 RMDN2Q96LZ7 410 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 SRPK1Q96SB4 655 aaKnown RBP3.73□□□□□ -1.81
PTPN22-211ENST00000538253 EPAS1Q99814 870 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 AGPAT1Q99943 283 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 BRD8Q9H0E9 1235 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 RBSNQ9H1K0 784 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 TTYH1Q9H313 450 aaPredicted RBP3.73□□□□□ -1.81
PTPN22-211ENST00000538253 POPDC2Q9HBU9 364 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 SLC2A4RGQ9NR83 387 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 ST7Q9NRC1 585 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.73□□□□□ -1.81
PTPN22-211ENST00000538253 IL37Q9NZH6 218 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 SFMBT1Q9UHJ3 866 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 NAGPAQ9UK23 515 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 TSPAN16Q9UKR8 245 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 DNPEPQ9ULA0 475 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 WDR27A2RRH5 827 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 TMEM110-MUSTN1A8MSY1 372 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 F8W8V4 182 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 KRT86O43790 486 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 CSPG5O95196 566 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 APODP05090 189 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 KRT7P08729 469 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 CCR1P32246 355 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 MAPK8P45983 427 aa3.73□□□□□ -1.81
PTPN22-211ENST00000538253 YWHAZP63104 245 aaKnown RBP3.73□□□□□ -1.81
PTPN22-211ENST00000538253 GRSF1Q12849 480 aaKnown RBP eCLIP3.73□□□□□ -1.81
PTPN22-211ENST00000538253 ILF2Q12905 390 aaKnown RBP3.73□□□□□ -1.81
PTPN22-211ENST00000538253 GRM3Q14832 879 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms