RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 NME3Q13232 169 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 TUBB3Q13509 450 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 EPC2Q52LR7 807 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 EFHC2Q5JST6 749 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 FNBP1LQ5T0N5 605 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 VWA5B1Q5TIE3 1220 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 ANKRD22Q5VYY1 191 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 PRR23BQ6ZRT6 265 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 CLIP4Q8N3C7 705 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 PCYOX1LQ8NBM8 494 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 EME1Q96AY2 570 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 PHOX2BQ99453 314 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 REEP2Q9BRK0 252 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 APOL6Q9BWW8 343 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 KLHL25Q9H0H3 589 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.06□□□□□ -0.64
RTN3-208ENST00000537981 SENP1Q9P0U3 644 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 EPS15L1Q9UBC2 864 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 ARFGEF1Q9Y6D6 1849 aa11.06□□□□□ -0.64
RTN3-208ENST00000537981 LOC105371267A0A1B0GV96 52 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 H3BMQ9 156 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 TGFB1I1O43294 461 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 GPR37L1O60883 481 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 MED24O75448 989 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 USP17L8P0C7I0 530 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 KRT10P13645 584 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 ZNF12P17014 697 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 CD58P19256 250 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 EIF2AK2P19525 551 aaKnown RBP11.05□□□□□ -0.64
RTN3-208ENST00000537981 ETFBP38117 255 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 IREB2P48200 963 aaKnown RBP11.05□□□□□ -0.64
RTN3-208ENST00000537981 NUP107P57740 925 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 DLG4P78352 724 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 IRX4P78413 519 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 TMPRSS15P98073 1019 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 GPS1Q13098 491 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 CCDC142Q17RM4 750 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 PERM1Q5SV97 790 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 PLEKHA7Q6IQ23 1121 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 USP17L2Q6R6M4 530 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 LYSMD3Q7Z3D4 306 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 POLNQ7Z5Q5 900 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 SETD3Q86TU7 594 aaPredicted RBP11.05□□□□□ -0.64
RTN3-208ENST00000537981 SLC47A2Q86VL8 602 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 TTC30AQ86WT1 665 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 CHERPQ8IWX8 916 aaKnown RBP11.05□□□□□ -0.64
RTN3-208ENST00000537981 RTKN2Q8IZC4 609 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 PHTF2Q8N3S3 785 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 ZBTB38Q8NAP3 1195 aaPredicted RBP11.05□□□□□ -0.64
RTN3-208ENST00000537981 FAR2Q96K12 515 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 COG8Q96MW5 612 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 PIGSQ96S52 555 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 TRIM56Q9BRZ2 755 aaKnown RBP11.05□□□□□ -0.64
RTN3-208ENST00000537981 SEZ6LQ9BYH1 1024 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 C1orf21Q9H246 121 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 OLAHQ9NV23 265 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 KCNK4Q9NYG8 393 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.05□□□□□ -0.64
RTN3-208ENST00000537981 DNMT3BQ9UBC3 853 aaKnown RBP11.05□□□□□ -0.64
RTN3-208ENST00000537981 KLHL3Q9UH77 587 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 DNPEPQ9ULA0 475 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 CARD8Q9Y2G2 431 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 SDR42E2A6NKP2 422 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 TMEM114B3SHH9 223 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 PI4K2BG5E9Z4 385 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 EML1O00423 815 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 MCF2LO15068 1137 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 PFDN6O15212 129 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 ENO2P09104 434 aaPredicted RBP11.05□□□□□ -0.64
RTN3-208ENST00000537981 ZNF182P17025 639 aaPredicted RBP11.05□□□□□ -0.64
RTN3-208ENST00000537981 NDUFV2P19404 249 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 PRDX6P30041 224 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 HMOX2P30519 316 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 PCYT1AP49585 367 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 ARHGAP4P98171 946 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 CREB5Q02930 508 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 CAV1Q03135 178 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 FAAP100Q0VG06 881 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 SELENBP1Q13228 472 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 SEPT6Q14141 434 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 GRM4Q14833 912 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 CHI3L2Q15782 390 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 ATP13A4Q4VNC1 1196 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 KCNT2Q6UVM3 1135 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 TMEM26Q6ZUK4 368 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 REXO1Q8N1G1 1221 aaKnown RBP11.05□□□□□ -0.64
RTN3-208ENST00000537981 MYO1HQ8N1T3 1032 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 CTRCQ99895 268 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 SLC7A5P2Q9GIP4 190 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 RPF2Q9H7B2 306 aaKnown RBP11.05□□□□□ -0.64
RTN3-208ENST00000537981 UBE2TQ9NPD8 197 aaPredicted RBP11.05□□□□□ -0.64
RTN3-208ENST00000537981 APEX2Q9UBZ4 518 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 COL4A1P02462 1669 aa11.05□□□□□ -0.64
RTN3-208ENST00000537981 TM9SF1O15321 606 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 IL2RBP14784 551 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 NRLP54845 237 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 KLF1Q13351 362 aaPredicted RBP11.04□□□□□ -0.64
RTN3-208ENST00000537981 ADGRE1Q14246 886 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 ABCB5Q2M3G0 1257 aa11.04□□□□□ -0.64
RTN3-208ENST00000537981 ZNF394Q53GI3 561 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms