RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 DDX3YO15523 660 aaKnown RBP5.57□□□□□ -1.52
PTPRD-213ENST00000537002 KCNN4O15554 427 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 FAM155BO75949 473 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 NSUN2Q08J23 767 aaKnown RBP eCLIP5.57□□□□□ -1.52
PTPRD-213ENST00000537002 SBK1Q52WX2 424 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 HYIQ5T013 277 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 OTOAQ7RTW8 1153 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 HORMAD1Q86X24 394 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 SLC35B4Q969S0 331 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 FAM149B1Q96BN6 582 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 GCOM2Q9BZD3 368 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-213ENST00000537002 CYP26B1Q9NR63 512 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 GOLGA8CPA6NN73 597 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 DNAJB5O75953 348 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 SGPL1O95470 568 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 C7P10643 843 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 CERKLQ49MI3 558 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-213ENST00000537002 PERM1Q5SV97 790 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 CDKL3Q8IVW4 592 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-213ENST00000537002 CCDC60Q8IWA6 550 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-213ENST00000537002 TTC30BQ8N4P2 665 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 SPIRE2Q8WWL2 714 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 CNDP2Q96KP4 475 aaKnown RBP5.57□□□□□ -1.52
PTPRD-213ENST00000537002 MCEEQ96PE7 176 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 SLX1AQ9BQ83 275 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 PRDM16Q9HAZ2 1276 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 PARVAQ9NVD7 372 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 PACSIN3Q9UKS6 424 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 KIF13BQ9NQT8 1826 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 CHEK2O96017 543 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 HSPA1AP0DMV8 641 aaKnown RBP5.57□□□□□ -1.52
PTPRD-213ENST00000537002 HSPA1BP0DMV9 641 aaKnown RBP5.57□□□□□ -1.52
PTPRD-213ENST00000537002 TUBP50607 506 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 HNRNPFP52597 415 aaKnown RBP5.57□□□□□ -1.52
PTPRD-213ENST00000537002 INHBCP55103 352 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 TMEM63BQ5T3F8 832 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 IL23RQ5VWK5 629 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 RNF19BQ6ZMZ0 732 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 RNF135Q8IUD6 432 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 ZBTB8OSQ8IWT0 167 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 ZSCAN18Q8TBC5 510 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-213ENST00000537002 DNAJC1Q96KC8 554 aaKnown RBP5.57□□□□□ -1.52
PTPRD-213ENST00000537002 ASNSD1Q9NWL6 643 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 TRNAU1APQ9NX07 287 aaKnown RBP5.57□□□□□ -1.52
PTPRD-213ENST00000537002 COQ6Q9Y2Z9 468 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 GJA3Q9Y6H8 435 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 ECM29Q5VYK3 1845 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 CLUHO75153 1309 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 CCDC78A2IDD5 438 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 BCL10O95999 233 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 CAPN1P07384 714 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 CYP2C9P11712 490 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 CHKAP35790 457 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 HADHAP40939 763 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 FOLH1Q04609 750 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 ZNF568Q3ZCX4 644 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 ZNF618Q5T7W0 954 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 METTL21CQ5VZV1 264 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 KLHL35Q6PF15 583 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 RHBDF2Q6PJF5 856 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 DSTYKQ6XUX3 929 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 MICU2Q8IYU8 434 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 PACRGLQ8N7B6 248 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 CDC26Q8NHZ8 85 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 PWWP2AQ96N64 755 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 ISCA1Q9BUE6 129 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 AVENQ9NQS1 362 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-213ENST00000537002 ARL8BQ9NVJ2 186 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 HSPBP1Q9NZL4 362 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 CDH7Q9ULB5 785 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 DOLKQ9UPQ8 538 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 NWD2Q9ULI1 1742 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 ZNF804BA4D1E1 1349 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 PLSCR1O15162 318 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 PMM2O15305 246 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 PRELPP51888 382 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 BCAR1P56945 870 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 JAM2P57087 298 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 NFX1Q12986 1120 aaKnown RBP5.56□□□□□ -1.52
PTPRD-213ENST00000537002 PRKG1Q13976 671 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 NPY5RQ15761 445 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 TMEM119Q4V9L6 283 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 SATL1Q86VE3 508 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 ZNF677Q86XU0 584 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 S100ZQ8WXG8 99 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 WDR12Q9GZL7 423 aaKnown RBP5.56□□□□□ -1.52
PTPRD-213ENST00000537002 DHX35Q9H5Z1 703 aaKnown RBP5.56□□□□□ -1.52
PTPRD-213ENST00000537002 ETNK2Q9NVF9 386 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 FNDC3AQ9Y2H6 1198 aaKnown RBP5.56□□□□□ -1.52
PTPRD-213ENST00000537002 TCRBV5S4A2TA0A5A2 114 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 M0QYV0 167 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 FBP2O00757 339 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 TBX3O15119 743 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 T-ENOLP0DO92 83 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 CDH6P55285 790 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 RELAQ04206 551 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 EFHC2Q5JST6 749 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 ZBTB49Q6ZSB9 765 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 TTC39CQ8N584 583 aa5.56□□□□□ -1.52
PTPRD-213ENST00000537002 TTLL6Q8N841 843 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms