RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 SPDYCQ5MJ68 293 aa20.74■□□□□ 0.91
TNFRSF1B-204ENST00000536782 KLHDC10Q6PID8 442 aa20.74■□□□□ 0.91
TNFRSF1B-204ENST00000536782 ARMCX6Q7L4S7 300 aa20.74■□□□□ 0.91
TNFRSF1B-204ENST00000536782 TMEFF1Q8IYR6 380 aa20.74■□□□□ 0.91
TNFRSF1B-204ENST00000536782 GUF1Q8N442 669 aaKnown RBP20.74■□□□□ 0.91
TNFRSF1B-204ENST00000536782 NMUR1Q9HB89 426 aa20.74■□□□□ 0.91
TNFRSF1B-204ENST00000536782 EVLQ9UI08 416 aaPredicted RBP20.74■□□□□ 0.91
TNFRSF1B-204ENST00000536782 MBD1Q9UIS9 605 aaPredicted RBP20.74■□□□□ 0.91
TNFRSF1B-204ENST00000536782 ZDHHC9Q9Y397 364 aa20.74■□□□□ 0.91
TNFRSF1B-204ENST00000536782 STARD13Q9Y3M8 1113 aa20.74■□□□□ 0.91
TNFRSF1B-204ENST00000536782 AKAP13Q12802 2813 aa20.74■□□□□ 0.91
TNFRSF1B-204ENST00000536782 A0A1W2PQH9 124 aa20.73■□□□□ 0.91
TNFRSF1B-204ENST00000536782 CACNG3O60359 315 aa20.73■□□□□ 0.91
TNFRSF1B-204ENST00000536782 RARGP13631 454 aa20.73■□□□□ 0.91
TNFRSF1B-204ENST00000536782 HOXB2P14652 356 aa20.73■□□□□ 0.91
TNFRSF1B-204ENST00000536782 TYRP14679 529 aa20.73■□□□□ 0.91
TNFRSF1B-204ENST00000536782 NTSR1P30989 418 aa20.73■□□□□ 0.91
TNFRSF1B-204ENST00000536782 DPP6P42658 865 aa20.73■□□□□ 0.91
TNFRSF1B-204ENST00000536782 PLA2G4AP47712 749 aa20.73■□□□□ 0.91
TNFRSF1B-204ENST00000536782 PSEN1P49768 467 aa20.73■□□□□ 0.91
TNFRSF1B-204ENST00000536782 C10orf120Q5SQS8 335 aa20.73■□□□□ 0.91
TNFRSF1B-204ENST00000536782 KRBA2Q6ZNG9 492 aa20.73■□□□□ 0.91
TNFRSF1B-204ENST00000536782 TPGS1Q6ZTW0 290 aa20.73■□□□□ 0.91
TNFRSF1B-204ENST00000536782 SYT12Q8IV01 421 aa20.73■□□□□ 0.91
TNFRSF1B-204ENST00000536782 TMEM8AQ9HCN3 771 aa20.73■□□□□ 0.91
TNFRSF1B-204ENST00000536782 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.73■□□□□ 0.91
TNFRSF1B-204ENST00000536782 MARK1Q9P0L2 795 aa20.73■□□□□ 0.91
TNFRSF1B-204ENST00000536782 DNMT3LQ9UJW3 386 aa20.73■□□□□ 0.91
TNFRSF1B-204ENST00000536782 NUDT5Q9UKK9 219 aa20.73■□□□□ 0.91
TNFRSF1B-204ENST00000536782 CDX4O14627 284 aaPredicted RBP20.72■□□□□ 0.91
TNFRSF1B-204ENST00000536782 ZBTB24O43167 697 aaPredicted RBP20.72■□□□□ 0.91
TNFRSF1B-204ENST00000536782 GABRG2P18507 467 aa20.72■□□□□ 0.91
TNFRSF1B-204ENST00000536782 PTGER3P43115 390 aa20.72■□□□□ 0.91
TNFRSF1B-204ENST00000536782 KIF11P52732 1056 aa20.72■□□□□ 0.91
TNFRSF1B-204ENST00000536782 LMAN2Q12907 356 aa20.72■□□□□ 0.91
TNFRSF1B-204ENST00000536782 TRIM61Q5EBN2 209 aa20.72■□□□□ 0.91
TNFRSF1B-204ENST00000536782 LYSMD4Q5XG99 296 aa20.72■□□□□ 0.91
TNFRSF1B-204ENST00000536782 KRT39Q6A163 491 aa20.72■□□□□ 0.91
TNFRSF1B-204ENST00000536782 SDE2Q6IQ49 451 aa20.72■□□□□ 0.91
TNFRSF1B-204ENST00000536782 CCDC186Q7Z3E2 898 aa20.72■□□□□ 0.91
TNFRSF1B-204ENST00000536782 TADA2BQ86TJ2 420 aa20.72■□□□□ 0.91
TNFRSF1B-204ENST00000536782 NUSAP1Q9BXS6 441 aaKnown RBP20.72■□□□□ 0.91
TNFRSF1B-204ENST00000536782 DUSP16Q9BY84 665 aa20.72■□□□□ 0.91
TNFRSF1B-204ENST00000536782 SCAND2PQ9GZW5 306 aaPredicted RBP20.72■□□□□ 0.91
TNFRSF1B-204ENST00000536782 NAGPAQ9UK23 515 aa20.72■□□□□ 0.91
TNFRSF1B-204ENST00000536782 HCN2Q9UL51 889 aa20.72■□□□□ 0.91
TNFRSF1B-204ENST00000536782 ADAMTS9Q9P2N4 1935 aa20.71■□□□□ 0.91
TNFRSF1B-204ENST00000536782 A0A1W2PQ27 194 aa20.71■□□□□ 0.91
TNFRSF1B-204ENST00000536782 A0A1W2PQ64 194 aa20.71■□□□□ 0.91
TNFRSF1B-204ENST00000536782 A0A1W2PQD8 194 aa20.71■□□□□ 0.91
TNFRSF1B-204ENST00000536782 MDM4O15151 490 aa20.71■□□□□ 0.91
TNFRSF1B-204ENST00000536782 AP5Z1O43299 807 aa20.71■□□□□ 0.91
TNFRSF1B-204ENST00000536782 RALAP11233 206 aa20.71■□□□□ 0.91
TNFRSF1B-204ENST00000536782 GTF2H1P32780 548 aa20.71■□□□□ 0.91
TNFRSF1B-204ENST00000536782 WASP42768 502 aa20.71■□□□□ 0.91
TNFRSF1B-204ENST00000536782 PPP1R26Q5T8A7 1209 aaPredicted RBP20.71■□□□□ 0.91
TNFRSF1B-204ENST00000536782 SH3PXD2AQ5TCZ1 1133 aa20.71■□□□□ 0.91
TNFRSF1B-204ENST00000536782 EGFLAMQ63HQ2 1017 aa20.71■□□□□ 0.91
TNFRSF1B-204ENST00000536782 MIB1Q86YT6 1006 aa20.71■□□□□ 0.91
TNFRSF1B-204ENST00000536782 CHPFQ8IZ52 775 aa20.71■□□□□ 0.91
TNFRSF1B-204ENST00000536782 ZNF276Q8N554 614 aa20.71■□□□□ 0.91
TNFRSF1B-204ENST00000536782 HEXIM2Q96MH2 286 aaKnown RBP20.71■□□□□ 0.91
TNFRSF1B-204ENST00000536782 TMEM74BQ9NUR3 256 aa20.71■□□□□ 0.91
TNFRSF1B-204ENST00000536782 ATP6V1DQ9Y5K8 247 aa20.71■□□□□ 0.91
TNFRSF1B-204ENST00000536782 A0A1W2PQF6 199 aa20.7■□□□□ 0.9
TNFRSF1B-204ENST00000536782 GIPC1O14908 333 aa20.7■□□□□ 0.9
TNFRSF1B-204ENST00000536782 DGKGP49619 791 aa20.7■□□□□ 0.9
TNFRSF1B-204ENST00000536782 ZCWPW2Q504Y3 356 aa20.7■□□□□ 0.9
TNFRSF1B-204ENST00000536782 ZNF394Q53GI3 561 aa20.7■□□□□ 0.9
TNFRSF1B-204ENST00000536782 SLC36A4Q6YBV0 504 aa20.7■□□□□ 0.9
TNFRSF1B-204ENST00000536782 Q6ZNB5 142 aa20.7■□□□□ 0.9
TNFRSF1B-204ENST00000536782 SCD5Q86SK9 330 aa20.7■□□□□ 0.9
TNFRSF1B-204ENST00000536782 TTC39CQ8N584 583 aa20.7■□□□□ 0.9
TNFRSF1B-204ENST00000536782 FAXDC2Q96IV6 333 aa20.7■□□□□ 0.9
TNFRSF1B-204ENST00000536782 CDK5RAP1Q96SZ6 601 aaKnown RBP20.7■□□□□ 0.9
TNFRSF1B-204ENST00000536782 ACOX2Q99424 681 aa20.7■□□□□ 0.9
TNFRSF1B-204ENST00000536782 CLIC5Q9NZA1 410 aa20.7■□□□□ 0.9
TNFRSF1B-204ENST00000536782 CALCOCO1Q9P1Z2 691 aa20.7■□□□□ 0.9
TNFRSF1B-204ENST00000536782 USP3Q9Y6I4 520 aa20.7■□□□□ 0.9
TNFRSF1B-204ENST00000536782 ASPMQ8IZT6 3477 aa20.7■□□□□ 0.9
TNFRSF1B-204ENST00000536782 PRRT4C9JH25 899 aa20.69■□□□□ 0.9
TNFRSF1B-204ENST00000536782 STC2O76061 302 aa20.69■□□□□ 0.9
TNFRSF1B-204ENST00000536782 ZNF202O95125 648 aa20.69■□□□□ 0.9
TNFRSF1B-204ENST00000536782 CSRP1P21291 193 aaKnown RBP20.69■□□□□ 0.9
TNFRSF1B-204ENST00000536782 MCCD1P59942 119 aaPredicted RBP20.69■□□□□ 0.9
TNFRSF1B-204ENST00000536782 RPL6Q02878 288 aaKnown RBP20.69■□□□□ 0.9
TNFRSF1B-204ENST00000536782 EDRF1Q3B7T1 1238 aa20.69■□□□□ 0.9
TNFRSF1B-204ENST00000536782 UAP1L1Q3KQV9 507 aa20.69■□□□□ 0.9
TNFRSF1B-204ENST00000536782 TOGARAM2Q6ZUX3 1019 aa20.69■□□□□ 0.9
TNFRSF1B-204ENST00000536782 FBXL13Q8NEE6 735 aa20.69■□□□□ 0.9
TNFRSF1B-204ENST00000536782 GOLPH3LQ9H4A5 285 aa20.69■□□□□ 0.9
TNFRSF1B-204ENST00000536782 PILRBQ9UKJ0 227 aa20.69■□□□□ 0.9
TNFRSF1B-204ENST00000536782 ZNF510Q9Y2H8 683 aa20.69■□□□□ 0.9
TNFRSF1B-204ENST00000536782 STX10O60499 249 aa20.68■□□□□ 0.9
TNFRSF1B-204ENST00000536782 ZNF217O75362 1048 aa20.68■□□□□ 0.9
TNFRSF1B-204ENST00000536782 CISD3P0C7P0 127 aa20.68■□□□□ 0.9
TNFRSF1B-204ENST00000536782 CEACAM1P13688 526 aa20.68■□□□□ 0.9
TNFRSF1B-204ENST00000536782 ITPKAP23677 461 aa20.68■□□□□ 0.9
TNFRSF1B-204ENST00000536782 HOXD12P35452 270 aa20.68■□□□□ 0.9
TNFRSF1B-204ENST00000536782 MXI1P50539 228 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms