RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 TMBIM4Q9HC24 238 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 ANLNQ9NQW6 1124 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 ARHGEF38Q9NXL2 777 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 KANSL3Q9P2N6 904 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 RASAL2Q9UJF2 1139 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 FAM170AA1A519 330 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 NRP1O14786 923 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 CCL5P13501 91 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 RARGP13631 454 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 RFC2P35250 354 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 SKOR1P84550 965 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 ZNF844Q08AG5 666 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 XRCC4Q13426 336 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 CA9Q16790 459 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 ANKRD20A8PQ5CZ79 823 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 NOMO2Q5JPE7 1267 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 DCUN1D2Q6PH85 259 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 ZCCHC9Q8N567 271 aaKnown RBP8.33□□□□□ -1.08
COL21A1-212ENST00000535941 PCDH19Q8TAB3 1148 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 FAM76AQ8TAV0 307 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 ZSCAN18Q8TBC5 510 aaPredicted RBP8.33□□□□□ -1.08
COL21A1-212ENST00000535941 FBXO25Q8TCJ0 367 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 CCHCR1Q8TD31 782 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 C1orf54Q8WWF1 131 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 MYLPFQ96A32 169 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 RNF25Q96BH1 459 aaPredicted RBP8.33□□□□□ -1.08
COL21A1-212ENST00000535941 SNRNP25Q9BV90 132 aaKnown RBP8.33□□□□□ -1.08
COL21A1-212ENST00000535941 OXCT2Q9BYC2 517 aaPredicted RBP8.33□□□□□ -1.08
COL21A1-212ENST00000535941 CWH43Q9H720 699 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 KBTBD13C9JR72 458 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 CLDN5O00501 218 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 DNALI1O14645 258 aaPredicted RBP8.33□□□□□ -1.08
COL21A1-212ENST00000535941 FAM155BO75949 473 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 C1QAP02745 245 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 PECAM1P16284 738 aaPredicted RBP8.33□□□□□ -1.08
COL21A1-212ENST00000535941 NOS2P35228 1153 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 LMNB2Q03252 620 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 BFSP2Q13515 415 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 HADHQ16836 314 aaKnown RBP8.33□□□□□ -1.08
COL21A1-212ENST00000535941 FAM47CQ5HY64 1035 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 CEP85LQ5SZL2 805 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 MFSD5Q6N075 450 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 SND1Q7KZF4 910 aaKnown RBP eCLIP8.33□□□□□ -1.08
COL21A1-212ENST00000535941 HOOK3Q86VS8 718 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 ZNF683Q8IZ20 524 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 NAT8LQ8N9F0 302 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 TTC13Q8NBP0 860 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 FAM172AQ8WUF8 416 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 FUBP3Q96I24 572 aaKnown RBP eCLIP8.33□□□□□ -1.08
COL21A1-212ENST00000535941 KCTD15Q96SI1 283 aaPredicted RBP8.33□□□□□ -1.08
COL21A1-212ENST00000535941 TMEM209Q96SK2 561 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 KLC2Q9H0B6 622 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 COMMD8Q9NX08 183 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 RRN3Q9NYV6 651 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 SHROOM3Q8TF72 1996 aa8.33□□□□□ -1.08
COL21A1-212ENST00000535941 KIAA1549LQ6ZVL6 1849 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 CASTOR2A6NHX0 329 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 DCLK1O15075 740 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 ABHD2P08910 425 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 KRT10P13645 584 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 EZRP15311 586 aaKnown RBP8.32□□□□□ -1.08
COL21A1-212ENST00000535941 PDGFRAP16234 1089 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 PCSK1P29120 753 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 PEX19P40855 299 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 MTMR3Q13615 1198 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 BYSLQ13895 437 aaKnown RBP8.32□□□□□ -1.08
COL21A1-212ENST00000535941 KCNJ11Q14654 390 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 CRYMQ14894 314 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 PAFAH1B3Q15102 231 aaKnown RBP8.32□□□□□ -1.08
COL21A1-212ENST00000535941 PRKD1Q15139 912 aaPredicted RBP8.32□□□□□ -1.08
COL21A1-212ENST00000535941 RASA2Q15283 850 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 MTFR1Q15390 333 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 ERMARDQ5T6L9 678 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 AFMIDQ63HM1 303 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 MSANTD2Q6P1R3 559 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 CCDC185Q8N715 623 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 SH3TC2Q8TF17 1288 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 PRCCQ92733 491 aaPredicted RBP8.32□□□□□ -1.08
COL21A1-212ENST00000535941 C8orf48Q96LL4 319 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 FMO2Q99518 471 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 VN1R3Q9BXE9 311 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 DNAI2Q9GZS0 605 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 PABPC3Q9H361 631 aaKnown RBP8.32□□□□□ -1.08
COL21A1-212ENST00000535941 KRT82Q9NSB4 513 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 HSFX1Q9UBD0 423 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 MCM8Q9UJA3 840 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 COL4A3Q01955 1670 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 GOLGA8SH3BPF8 625 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 PDGFRBP09619 1106 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 ZDHHC11BP0C7U3 371 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 FAM200BP0CF97 657 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 GBP2P32456 591 aaPredicted RBP8.32□□□□□ -1.08
COL21A1-212ENST00000535941 KCNJ1P48048 391 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 CXCR3P49682 368 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 RGS7P49802 495 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 GDF10P55107 478 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 ADIGQ0VDE8 80 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 C11orf91Q3C1V1 193 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 RNF187Q5TA31 235 aaPredicted RBP8.32□□□□□ -1.08
COL21A1-212ENST00000535941 NCBP2-AS2Q69YL0 99 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms