RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 ZDHHC17Q8IUH5 632 aa12.62□□□□□ -0.39
CHD4-203ENST00000535717 CNGA4Q8IV77 575 aa12.62□□□□□ -0.39
CHD4-203ENST00000535717 DRC7Q8IY82 874 aa12.62□□□□□ -0.39
CHD4-203ENST00000535717 BPIFB1Q8TDL5 484 aa12.62□□□□□ -0.39
CHD4-203ENST00000535717 RNF139Q8WU17 664 aa12.62□□□□□ -0.39
CHD4-203ENST00000535717 DEPDC1BQ8WUY9 529 aa12.62□□□□□ -0.39
CHD4-203ENST00000535717 WBP2Q969T9 261 aa12.62□□□□□ -0.39
CHD4-203ENST00000535717 C11orf70Q9BRQ4 267 aa12.62□□□□□ -0.39
CHD4-203ENST00000535717 TRMT61BQ9BVS5 477 aaKnown RBP12.62□□□□□ -0.39
CHD4-203ENST00000535717 POPDC2Q9HBU9 364 aa12.62□□□□□ -0.39
CHD4-203ENST00000535717 OLA1Q9NTK5 396 aaKnown RBP12.62□□□□□ -0.39
CHD4-203ENST00000535717 ASNSD1Q9NWL6 643 aa12.62□□□□□ -0.39
CHD4-203ENST00000535717 MARCH2Q9P0N8 246 aa12.62□□□□□ -0.39
CHD4-203ENST00000535717 CFAP97Q9P2B7 532 aa12.62□□□□□ -0.39
CHD4-203ENST00000535717 RASAL2Q9UJF2 1139 aa12.62□□□□□ -0.39
CHD4-203ENST00000535717 NAALADL1Q9UQQ1 740 aa12.62□□□□□ -0.39
CHD4-203ENST00000535717 TMCO5BA8MYB1 307 aa12.61□□□□□ -0.39
CHD4-203ENST00000535717 GOLGA8SH3BPF8 625 aa12.61□□□□□ -0.39
CHD4-203ENST00000535717 HSF2BPO75031 334 aa12.61□□□□□ -0.39
CHD4-203ENST00000535717 GRAP2O75791 330 aa12.61□□□□□ -0.39
CHD4-203ENST00000535717 GLI1P08151 1106 aa12.61□□□□□ -0.39
CHD4-203ENST00000535717 IRF1P10914 325 aa12.61□□□□□ -0.39
CHD4-203ENST00000535717 SRFP11831 508 aa12.61□□□□□ -0.39
CHD4-203ENST00000535717 NCAM1P13591 858 aa12.61□□□□□ -0.39
CHD4-203ENST00000535717 CDC25BP30305 580 aa12.61□□□□□ -0.39
CHD4-203ENST00000535717 GDI1P31150 447 aa12.61□□□□□ -0.39
CHD4-203ENST00000535717 EIF4A3P38919 411 aaKnown RBP12.61□□□□□ -0.39
CHD4-203ENST00000535717 C1QBPQ07021 282 aaKnown RBP12.61□□□□□ -0.39
CHD4-203ENST00000535717 MTF1Q14872 753 aa12.61□□□□□ -0.39
CHD4-203ENST00000535717 TSR1Q2NL82 804 aaKnown RBP12.61□□□□□ -0.39
CHD4-203ENST00000535717 SYPL2Q5VXT5 272 aa12.61□□□□□ -0.39
CHD4-203ENST00000535717 MON1BQ7L1V2 547 aa12.61□□□□□ -0.39
CHD4-203ENST00000535717 PHLDB2Q86SQ0 1253 aa12.61□□□□□ -0.39
CHD4-203ENST00000535717 DDX42Q86XP3 938 aaKnown RBP eCLIP12.61□□□□□ -0.39
CHD4-203ENST00000535717 DNAAF5Q86Y56 855 aa12.61□□□□□ -0.39
CHD4-203ENST00000535717 YAF2Q8IY57 180 aa12.61□□□□□ -0.39
CHD4-203ENST00000535717 TC2NQ8N9U0 490 aa12.61□□□□□ -0.39
CHD4-203ENST00000535717 ASIC4Q96FT7 647 aa12.61□□□□□ -0.39
CHD4-203ENST00000535717 ZFYVE19Q96K21 471 aa12.61□□□□□ -0.39
CHD4-203ENST00000535717 SLC2A13Q96QE2 648 aa12.61□□□□□ -0.39
CHD4-203ENST00000535717 TRIM62Q9BVG3 475 aa12.61□□□□□ -0.39
CHD4-203ENST00000535717 ZNHIT6Q9NWK9 470 aaKnown RBP12.61□□□□□ -0.39
CHD4-203ENST00000535717 THG1LQ9NWX6 298 aaKnown RBP12.61□□□□□ -0.39
CHD4-203ENST00000535717 ADAM22Q9P0K1 906 aa12.61□□□□□ -0.39
CHD4-203ENST00000535717 ADAMTS1Q9UHI8 967 aa12.61□□□□□ -0.39
CHD4-203ENST00000535717 SFMBT1Q9UHJ3 866 aa12.61□□□□□ -0.39
CHD4-203ENST00000535717 DUSP12Q9UNI6 340 aa12.61□□□□□ -0.39
CHD4-203ENST00000535717 KIF26AQ9ULI4 1882 aaPredicted RBP12.6□□□□□ -0.39
CHD4-203ENST00000535717 A0A087X0T9 212 aa12.6□□□□□ -0.39
CHD4-203ENST00000535717 SLC12A8A0AV02 714 aa12.6□□□□□ -0.39
CHD4-203ENST00000535717 TNFRSF10AO00220 468 aa12.6□□□□□ -0.39
CHD4-203ENST00000535717 ARNTLO00327 626 aa12.6□□□□□ -0.39
CHD4-203ENST00000535717 CAPN9O14815 690 aa12.6□□□□□ -0.39
CHD4-203ENST00000535717 SCAMP3O14828 347 aaKnown RBP12.6□□□□□ -0.39
CHD4-203ENST00000535717 ZNF263O14978 683 aa12.6□□□□□ -0.39
CHD4-203ENST00000535717 CHADO15335 359 aa12.6□□□□□ -0.39
CHD4-203ENST00000535717 DCXO43602 365 aa12.6□□□□□ -0.39
CHD4-203ENST00000535717 GREM1O60565 184 aa12.6□□□□□ -0.39
CHD4-203ENST00000535717 CALB1P05937 261 aa12.6□□□□□ -0.39
CHD4-203ENST00000535717 FAM228BP0C875 321 aa12.6□□□□□ -0.39
CHD4-203ENST00000535717 GZMAP12544 262 aa12.6□□□□□ -0.39
CHD4-203ENST00000535717 SCNN1AP37088 669 aa12.6□□□□□ -0.39
CHD4-203ENST00000535717 RNASE9P60153 205 aaKnown RBP12.6□□□□□ -0.39
CHD4-203ENST00000535717 ZXDAP98168 799 aa12.6□□□□□ -0.39
CHD4-203ENST00000535717 ARHGAP29Q52LW3 1261 aa12.6□□□□□ -0.39
CHD4-203ENST00000535717 DCAF6Q58WW2 860 aa12.6□□□□□ -0.39
CHD4-203ENST00000535717 FAM102AQ5T9C2 384 aaPredicted RBP12.6□□□□□ -0.39
CHD4-203ENST00000535717 UBALD2Q8IYN6 164 aa12.6□□□□□ -0.39
CHD4-203ENST00000535717 MCOLN2Q8IZK6 566 aa12.6□□□□□ -0.39
CHD4-203ENST00000535717 DEFB106AQ8N104 65 aa12.6□□□□□ -0.39
CHD4-203ENST00000535717 DQX1Q8TE96 717 aaKnown RBP12.6□□□□□ -0.39
CHD4-203ENST00000535717 PKNOX2Q96KN3 472 aa12.6□□□□□ -0.39
CHD4-203ENST00000535717 CHP1Q99653 195 aa12.6□□□□□ -0.39
CHD4-203ENST00000535717 FAM83CQ9BQN1 747 aa12.6□□□□□ -0.39
CHD4-203ENST00000535717 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.6□□□□□ -0.39
CHD4-203ENST00000535717 LINC00597Q9H2U6 94 aa12.6□□□□□ -0.39
CHD4-203ENST00000535717 BRD9Q9H8M2 597 aa12.6□□□□□ -0.39
CHD4-203ENST00000535717 SLC2A4RGQ9NR83 387 aa12.6□□□□□ -0.39
CHD4-203ENST00000535717 STRIP2Q9ULQ0 834 aa12.6□□□□□ -0.39
CHD4-203ENST00000535717 WNT6Q9Y6F9 365 aa12.6□□□□□ -0.39
CHD4-203ENST00000535717 E2F8A0AVK6 867 aa12.59□□□□□ -0.39
CHD4-203ENST00000535717 GOLGA6L3A6NEY3 463 aa12.59□□□□□ -0.39
CHD4-203ENST00000535717 MSI1O43347 362 aaKnown RBP12.59□□□□□ -0.39
CHD4-203ENST00000535717 RTN2O75298 545 aa12.59□□□□□ -0.39
CHD4-203ENST00000535717 DAB1O75553 588 aa12.59□□□□□ -0.39
CHD4-203ENST00000535717 STC2O76061 302 aa12.59□□□□□ -0.39
CHD4-203ENST00000535717 FTLP02792 175 aaPredicted RBP12.59□□□□□ -0.39
CHD4-203ENST00000535717 HMBSP08397 361 aa12.59□□□□□ -0.39
CHD4-203ENST00000535717 GSCP56915 257 aaPredicted RBP12.59□□□□□ -0.39
CHD4-203ENST00000535717 PITX1P78337 314 aaPredicted RBP12.59□□□□□ -0.39
CHD4-203ENST00000535717 COG7P83436 770 aa12.59□□□□□ -0.39
CHD4-203ENST00000535717 TNK2Q07912 1038 aa12.59□□□□□ -0.39
CHD4-203ENST00000535717 ASTE1Q2TB18 679 aaPredicted RBP12.59□□□□□ -0.39
CHD4-203ENST00000535717 TRIM68Q6AZZ1 485 aa12.59□□□□□ -0.39
CHD4-203ENST00000535717 PPP1R2P3Q6NXS1 205 aa12.59□□□□□ -0.39
CHD4-203ENST00000535717 CC2D1AQ6P1N0 951 aaPredicted RBP12.59□□□□□ -0.39
CHD4-203ENST00000535717 HTR3DQ70Z44 454 aa12.59□□□□□ -0.39
CHD4-203ENST00000535717 TAC4Q86UU9 113 aa12.59□□□□□ -0.39
CHD4-203ENST00000535717 VPS36Q86VN1 386 aa12.59□□□□□ -0.39
CHD4-203ENST00000535717 KIAA1958Q8N8K9 716 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms