RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 SMC5Q8IY18 1101 aa3.84□□□□□ -1.79
SNHG1-202ENST00000535689 GPC2Q8N158 579 aa3.84□□□□□ -1.79
SNHG1-202ENST00000535689 SH3RF3Q8TEJ3 882 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-202ENST00000535689 ZNF483Q8TF39 744 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-202ENST00000535689 EXTL1Q92935 676 aa3.84□□□□□ -1.79
SNHG1-202ENST00000535689 PTCD3Q96EY7 689 aaKnown RBP3.84□□□□□ -1.79
SNHG1-202ENST00000535689 WWC2-AS2Q96NR7 200 aa3.84□□□□□ -1.79
SNHG1-202ENST00000535689 NT5C1BQ96P26 610 aa3.84□□□□□ -1.79
SNHG1-202ENST00000535689 MESP1Q9BRJ9 268 aa3.84□□□□□ -1.79
SNHG1-202ENST00000535689 APOL5Q9BWW9 433 aa3.84□□□□□ -1.79
SNHG1-202ENST00000535689 TEX13AQ9BXU3 409 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-202ENST00000535689 ZNF341Q9BYN7 854 aa3.84□□□□□ -1.79
SNHG1-202ENST00000535689 TPSD1Q9BZJ3 242 aa3.84□□□□□ -1.79
SNHG1-202ENST00000535689 INO80BQ9C086 356 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-202ENST00000535689 TTYH3Q9C0H2 523 aa3.84□□□□□ -1.79
SNHG1-202ENST00000535689 VPS33BQ9H267 617 aa3.84□□□□□ -1.79
SNHG1-202ENST00000535689 VPS11Q9H270 941 aa3.84□□□□□ -1.79
SNHG1-202ENST00000535689 SMURF2Q9HAU4 748 aa3.84□□□□□ -1.79
SNHG1-202ENST00000535689 CASS4Q9NQ75 786 aa3.84□□□□□ -1.79
SNHG1-202ENST00000535689 NECTIN3Q9NQS3 549 aa3.84□□□□□ -1.79
SNHG1-202ENST00000535689 SAGE1Q9NXZ1 904 aa3.84□□□□□ -1.79
SNHG1-202ENST00000535689 COL20A1Q9P218 1284 aa3.84□□□□□ -1.79
SNHG1-202ENST00000535689 NARFQ9UHQ1 456 aa3.84□□□□□ -1.79
SNHG1-202ENST00000535689 CAPN11Q9UMQ6 739 aa3.84□□□□□ -1.79
SNHG1-202ENST00000535689 USP22Q9UPT9 525 aa3.84□□□□□ -1.79
SNHG1-202ENST00000535689 USP42Q9H9J4 1324 aaKnown RBP3.84□□□□□ -1.79
SNHG1-202ENST00000535689 DLEC1Q9Y238 1755 aa3.84□□□□□ -1.8
SNHG1-202ENST00000535689 PIPSLA2A3N6 862 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 PRSS29PA6NIE9 313 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 AHRRA9YTQ3 701 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 B8ZZF3 427 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 KPNA5O15131 536 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 ZNF185O15231 689 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 FAM20BO75063 409 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 VPS4BO75351 444 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 SUN1O94901 812 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 GLP2RO95838 553 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 LDHAP00338 332 aaKnown RBP3.83□□□□□ -1.8
SNHG1-202ENST00000535689 BTF3P20290 206 aaKnown RBP3.83□□□□□ -1.8
SNHG1-202ENST00000535689 FGFR2P21802 821 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 CRKLP46109 303 aaKnown RBP3.83□□□□□ -1.8
SNHG1-202ENST00000535689 DGKEP52429 567 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 MAPK10P53779 464 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 CHAF1AQ13111 956 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-202ENST00000535689 BMPR2Q13873 1038 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 GALEQ14376 348 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 PTPRRQ15256 657 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 C3orf38Q5JPI3 329 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 C1orf141Q5JVX7 400 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 SPDYAQ5MJ70 313 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 ZNF618Q5T7W0 954 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 DCAF12L1Q5VU92 463 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 CACHD1Q5VU97 1274 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 MRNIPQ6NTE8 343 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 SWSAP1Q6NVH7 229 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 TAF2Q6P1X5 1199 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 TMEM108Q6UXF1 575 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 UNC13DQ70J99 1090 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 MICU3Q86XE3 530 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 ADGRG5Q8IZF4 528 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 IL17DQ8TAD2 202 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 PROKR1Q8TCW9 393 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 ABHD5Q8WTS1 349 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 CAVIN3Q969G5 261 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 TMEM125Q96AQ2 219 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 RSPRY1Q96DX4 576 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 MASTLQ96GX5 879 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 TMEM41AQ96HV5 264 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 SGCZQ96LD1 299 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 PAGR1Q9BTK6 254 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 TLR10Q9BXR5 811 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 KRTAP4-11Q9BYQ6 195 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 CHST8Q9H2A9 424 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 GLOD4Q9HC38 313 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 EHD3Q9NZN3 535 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 CEP72Q9P209 647 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 CTTNBP2NLQ9P2B4 639 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 LRIT1Q9P2V4 623 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 NFU1Q9UMS0 254 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 SLC45A2Q9UMX9 530 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 TONSLQ96HA7 1378 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 TOGARAM1Q9Y4F4 1720 aa3.83□□□□□ -1.8
SNHG1-202ENST00000535689 POLR2AP24928 1970 aaKnown RBP3.83□□□□□ -1.8
SNHG1-202ENST00000535689 ROCK2O75116 1388 aaKnown RBP3.82□□□□□ -1.8
SNHG1-202ENST00000535689 FLT4P35916 1363 aa3.82□□□□□ -1.8
SNHG1-202ENST00000535689 ABHD14A-ACY1A0A1B0GW23 586 aa3.82□□□□□ -1.8
SNHG1-202ENST00000535689 A0A1W2PPC4 97 aa3.82□□□□□ -1.8
SNHG1-202ENST00000535689 GRXCR1A8MXD5 290 aa3.82□□□□□ -1.8
SNHG1-202ENST00000535689 E9PLN8 166 aa3.82□□□□□ -1.8
SNHG1-202ENST00000535689 F5H423 210 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-202ENST00000535689 GCOM1H8Y6P7 765 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-202ENST00000535689 SLC16A3O15427 465 aaKnown RBP3.82□□□□□ -1.8
SNHG1-202ENST00000535689 FFAR2O15552 330 aa3.82□□□□□ -1.8
SNHG1-202ENST00000535689 PIAS2O75928 621 aa3.82□□□□□ -1.8
SNHG1-202ENST00000535689 RASAL1O95294 804 aa3.82□□□□□ -1.8
SNHG1-202ENST00000535689 STARD3NLO95772 234 aa3.82□□□□□ -1.8
SNHG1-202ENST00000535689 EEF1GP26641 437 aaKnown RBP3.82□□□□□ -1.8
SNHG1-202ENST00000535689 SOX10P56693 466 aa3.82□□□□□ -1.8
SNHG1-202ENST00000535689 ABHD18Q0P651 414 aa3.82□□□□□ -1.8
SNHG1-202ENST00000535689 FAM153CQ494X1 144 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms