RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 NECAB2Q7Z6G3 386 aa13□□□□□ -0.33
SPG11-203ENST00000535302 LEMD2Q8NC56 503 aa13□□□□□ -0.33
SPG11-203ENST00000535302 GPRC5DQ9NZD1 345 aa13□□□□□ -0.33
SPG11-203ENST00000535302 C2orf81A6NN90 581 aa13□□□□□ -0.33
SPG11-203ENST00000535302 STIP1P31948 543 aaKnown RBP13□□□□□ -0.33
SPG11-203ENST00000535302 HALP42357 657 aa13□□□□□ -0.33
SPG11-203ENST00000535302 PARP8Q8N3A8 854 aa13□□□□□ -0.33
SPG11-203ENST00000535302 UBASH3BQ8TF42 649 aa13□□□□□ -0.33
SPG11-203ENST00000535302 ADM5C9JUS6 153 aa13□□□□□ -0.33
SPG11-203ENST00000535302 OXCT1P55809 520 aa13□□□□□ -0.33
SPG11-203ENST00000535302 DEFA1P59665 94 aa13□□□□□ -0.33
SPG11-203ENST00000535302 DEFA3P59666 94 aa13□□□□□ -0.33
SPG11-203ENST00000535302 POLD3Q15054 466 aaPredicted RBP13□□□□□ -0.33
SPG11-203ENST00000535302 MRPS26Q9BYN8 205 aaKnown RBP13□□□□□ -0.33
SPG11-203ENST00000535302 AGO4Q9HCK5 861 aaKnown RBP13□□□□□ -0.33
SPG11-203ENST00000535302 SMPD4Q9NXE4 827 aa13□□□□□ -0.33
SPG11-203ENST00000535302 SH3BP4Q9P0V3 963 aa13□□□□□ -0.33
SPG11-203ENST00000535302 MADDQ8WXG6 1647 aa12.99□□□□□ -0.33
SPG11-203ENST00000535302 PNPLA6Q8IY17 1366 aa12.99□□□□□ -0.33
SPG11-203ENST00000535302 TBKBP1A7MCY6 615 aa12.99□□□□□ -0.33
SPG11-203ENST00000535302 CFAP99D6REC4 459 aa12.99□□□□□ -0.33
SPG11-203ENST00000535302 OGTO15294 1046 aa12.99□□□□□ -0.33
SPG11-203ENST00000535302 LAMTOR4Q0VGL1 99 aa12.99□□□□□ -0.33
SPG11-203ENST00000535302 COQ7Q99807 217 aa12.99□□□□□ -0.33
SPG11-203ENST00000535302 RTFDC1Q9BY42 306 aaPredicted RBP12.99□□□□□ -0.33
SPG11-203ENST00000535302 KLHL41O60662 606 aa12.99□□□□□ -0.33
SPG11-203ENST00000535302 RRM1P23921 792 aa12.99□□□□□ -0.33
SPG11-203ENST00000535302 NCKAP1LP55160 1127 aa12.99□□□□□ -0.33
SPG11-203ENST00000535302 C10orf88Q9H8K7 445 aa12.99□□□□□ -0.33
SPG11-203ENST00000535302 USP31Q70CQ4 1352 aa12.99□□□□□ -0.33
SPG11-203ENST00000535302 TRIM16LQ309B1 348 aa12.99□□□□□ -0.33
SPG11-203ENST00000535302 WDR36Q8NI36 951 aaKnown RBP12.99□□□□□ -0.33
SPG11-203ENST00000535302 FBXO10Q9UK96 956 aa12.99□□□□□ -0.33
SPG11-203ENST00000535302 PHTF1Q9UMS5 762 aa12.99□□□□□ -0.33
SPG11-203ENST00000535302 CYP2C8P10632 490 aa12.99□□□□□ -0.33
SPG11-203ENST00000535302 GARTP22102 1010 aa12.99□□□□□ -0.33
SPG11-203ENST00000535302 PNPLA4P41247 253 aa12.99□□□□□ -0.33
SPG11-203ENST00000535302 CES3Q6UWW8 571 aa12.99□□□□□ -0.33
SPG11-203ENST00000535302 C16orf59Q7L2K0 433 aa12.99□□□□□ -0.33
SPG11-203ENST00000535302 AGBL3Q8NEM8 1001 aa12.99□□□□□ -0.33
SPG11-203ENST00000535302 RDM1Q8NG50 284 aa12.99□□□□□ -0.33
SPG11-203ENST00000535302 RELTQ969Z4 430 aa12.99□□□□□ -0.33
SPG11-203ENST00000535302 SERAC1Q96JX3 654 aa12.99□□□□□ -0.33
SPG11-203ENST00000535302 ZMYM5Q9UJ78 669 aa12.99□□□□□ -0.33
SPG11-203ENST00000535302 NUDT5Q9UKK9 219 aa12.99□□□□□ -0.33
SPG11-203ENST00000535302 HLA-DQA2P01906 255 aa12.99□□□□□ -0.33
SPG11-203ENST00000535302 CCR4P51679 360 aa12.99□□□□□ -0.33
SPG11-203ENST00000535302 CSHL1Q14406 222 aa12.99□□□□□ -0.33
SPG11-203ENST00000535302 LPIN1Q14693 890 aa12.99□□□□□ -0.33
SPG11-203ENST00000535302 TKTL1P51854 596 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 HERVK_113P62684 666 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 ZNF677Q86XU0 584 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 CMTM5Q96DZ9 223 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 USP18Q9UMW8 372 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 FGFR3P22607 806 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 GTF2E2P29084 291 aaKnown RBP12.98□□□□□ -0.33
SPG11-203ENST00000535302 SCNN1BP51168 640 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 DNAL1Q4LDG9 190 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 MIIPQ5JXC2 388 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 LLGL2Q6P1M3 1020 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 KLHL17Q6TDP4 642 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 LRRC8DQ7L1W4 858 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 ZNF438Q7Z4V0 828 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 CCDC134Q9H6E4 229 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 AP4E1Q9UPM8 1137 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 MGAT4DA6NG13 374 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 PDHXO00330 501 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 TP73O15350 636 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 JCHAINP01591 159 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 UMPSP11172 480 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 ITGA3P26006 1051 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 RRM2P31350 389 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 ATP1A4Q13733 1029 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 FAM83EQ2M2I3 478 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 PLEKHA7Q6IQ23 1121 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 SLC25A24Q6NUK1 477 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 ATG16L2Q8NAA4 619 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 C19orf18Q8NEA5 215 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 DNAJC9Q8WXX5 260 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 CATSPER2Q96P56 530 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 DDX43Q9NXZ2 648 aaKnown RBP12.98□□□□□ -0.33
SPG11-203ENST00000535302 MTO1Q9Y2Z2 717 aaKnown RBP12.98□□□□□ -0.33
SPG11-203ENST00000535302 PRKAB1Q9Y478 270 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 SOAT2O75908 522 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 GEMP55040 296 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 DENND1BQ6P3S1 775 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 DET1Q7L5Y6 550 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 STRA8Q7Z7C7 330 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 FIG4Q92562 907 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 STARD7Q9NQZ5 370 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 CCNT2O60583 730 aaKnown RBP12.98□□□□□ -0.33
SPG11-203ENST00000535302 ANXA9O76027 345 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 CKBP12277 381 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 RPS12P25398 132 aaKnown RBP12.98□□□□□ -0.33
SPG11-203ENST00000535302 RHOAP61586 193 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 AGBL2Q5U5Z8 902 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 CISHQ9NSE2 258 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 CYP39A1Q9NYL5 469 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 SATB2Q9UPW6 733 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 GOLGA8TH3BQL2 631 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms